prot_H-paniculata_contig24358.6598.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24358.6598.1
Unique Nameprot_H-paniculata_contig24358.6598.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length154
Homology
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BLAST of mRNA_H-paniculata_contig24358.6598.1 vs. uniprot
Match: A0A6H5L1L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L5_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 2.090e-27
Identity = 54/86 (62.79%), Postives = 71/86 (82.56%), Query Frame = 0 
Query:   69 DQPTGDMPTAAEMERRDEDRDAQSSMENLLPREKIENGLRHARLLFATGWAGLASRVKELEETETVAKLKEGTVTIVDRSMDGLSK 154
            +QPTG++P+A EME R   +DA SS +NLLP +K+ENGLRHA+++FATGWA +A+  ++LE TET  K+KEGTV +VDRSMDGLSK
Sbjct:   68 EQPTGEVPSAEEMEDR---KDATSSSDNLLPTDKLENGLRHAKMIFATGWASVAATYRDLERTETAEKIKEGTVNLVDRSMDGLSK 150
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BLAST of mRNA_H-paniculata_contig24358.6598.1 vs. uniprot
Match: D7G658_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G658_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 2.020e-22
Identity = 47/70 (67.14%), Postives = 59/70 (84.29%), Query Frame = 0 
Query:   86 EDR-DAQSSMENLLPREKIENGLRHARLLFATGWAGLASRVKELEETETVAKLKEGTVTIVDRSMDGLSK 154
            EDR DA SS +NLLP +K+ENGLRHA+++FATGWA +A+  ++LE TET  K+KEGTV +VDRSMDGLSK
Sbjct:    2 EDRKDATSSSDNLLPTDKLENGLRHAKMIFATGWASVAATYRDLERTETAEKIKEGTVNLVDRSMDGLSK 71
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24358.6598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1L5_9PHAE2.090e-2762.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G658_ECTSI2.020e-2267.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24358contigH-paniculata_contig24358:1370..3209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24358.6598.1mRNA_H-paniculata_contig24358.6598.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24358 1169..3209 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24358.6598.1 ID=prot_H-paniculata_contig24358.6598.1|Name=mRNA_H-paniculata_contig24358.6598.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
MSNFEGTSSSSSDITIPSANGGDGIGGGDSQTAAVAAPAGIQEVPSSYTG
AAGGVSEEDMAAIMSVSVDQPTGDMPTAAEMERRDEDRDAQSSMENLLPR
EKIENGLRHARLLFATGWAGLASRVKELEETETVAKLKEGTVTIVDRSMD
GLSK
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