prot_H-paniculata_contig24352.6596.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI) HSP 1 Score: 531 bits (1369), Expect = 1.630e-177 Identity = 261/267 (97.75%), Postives = 263/267 (98.50%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQNRLCVRKKHINDLHDPNYGWTNLMQQ 267
GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDK TQFVVGTAIKSQFITDGLKYSLATGNWGDKK ATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQT+CTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVE NRL +RKKHINDLHDPNYGWTNLMQQ
Sbjct: 482 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQ 748
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA) HSP 1 Score: 412 bits (1060), Expect = 1.110e-132 Identity = 203/268 (75.75%), Postives = 226/268 (84.33%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQNRLCVRKKHINDL--HDPNYGWTNLMQ 266
GKKRLDLAG L+AGLFR Q CLD+ FV+G AIKS IT+GL+YSLATGNWGD+K ATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVGC+LSPILEFLEEWA ENL+EI+P IA+ CTK+FVNGNW+G+HR+PN+LV+TLV QRR LDID EVSVVRDIK RELRLYTDAGR+CRPLFVV+ N+L +RK HI+DL + Y WT+LMQ
Sbjct: 393 GKKRLDLAGPLVAGLFRTXXXXXXXXXXXXXQKCLDEGRGFVLGVAIKSNTITNGLRYSLATGNWGDQKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGCALSPILEFLEEWATENLEEISPSTIAEKQCTKIFVNGNWIGIHREPNQLVRTLVIQRRCLDIDAEVSVVRDIKERELRLYTDAGRICRPLFVVQNNKLVIRKSHIHDLVSNPEEYNWTSLMQ 660
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: A0A7S2AX64_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AX64_9STRA) HSP 1 Score: 383 bits (983), Expect = 2.750e-125 Identity = 192/274 (70.07%), Postives = 223/274 (81.39%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQN-----RLCVRKKHINDL--HDPNYGWTNLMQQ 267
GKKRLDLAG LLAGLFR LFRKLT++VRKYLQ CLD+ F V TAIKS+ ++DGLKYSLATGNWGD+++ ++AGVSQVLNRL YAS LSHLRRLNTPLGREGKQA PRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYISVG + +PILEFL+EW+ME+L+EI P +I+ TK+ VNGNWVG+HRDP RL QT+ RR LD D EVSVVRDIK ELR+YTDAGRVCRPLF+VE++ RL V+K H L + Y W+NL +
Sbjct: 394 GKKRLDLAGPLLAGLFRLLFRKLTKDVRKYLQRCLDERKPFNVTTAIKSRTLSDGLKYSLATGNWGDRRNPSRAGVSQVLNRLAYASTLSHLRRLNTPLGREGKQAGPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGSAQAPILEFLDEWSMEHLEEIQPAVISDPGTTKILVNGNWVGIHRDPERLCQTMRALRRRLDFDPEVSVVRDIKESELRIYTDAGRVCRPLFIVEKDDYGLQRLKVKKSHTRRLLSDEEKYRWSNLTME 667
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: F0YIN3_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN3_AURAN) HSP 1 Score: 392 bits (1006), Expect = 4.030e-125 Identity = 193/268 (72.01%), Postives = 221/268 (82.46%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQ---NRLCVRKKHINDLHDPNYGWTNLM 265
GKKRLDLAG LL GLFR LFRKLT++V YLQ C+D+ F + +AIKS+ ITDGL+YSLATGNWGD+KDA++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG SPILEFLEEW+MENL+EI+P IA TK+FVNG+WVGVHRDP+ L TL RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL ++ + L +RK HI L + GWT L+
Sbjct: 340 GKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEGRDFNLASAIKSRVITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRIYTDAGRVCRPLLIISKFSRQELRLRKSHIQKLVNGELGWTQLL 607
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: A0A8J2SZW4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZW4_9STRA) HSP 1 Score: 388 bits (997), Expect = 4.210e-123 Identity = 195/283 (68.90%), Postives = 224/283 (79.15%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQN------------------RLCVRKKHINDLHDPNYGWTNLM 265
GKKRLDLAG LL GLFR LFRKLT++V YLQ C+D++ F + +AIKS+ ITDGL+YSLATGNWGD+KDA++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAY+SVG SPILEFLEEW+MENL+EI+P IA TK+FVNG+W+GVHRDP L TL RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL +VE + +L +RK HI+ L + GWT L+
Sbjct: 436 GKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEARDFNLASAIKSRLITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWIGVHRDPCTLEATLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVESDHASTWKDPLNHSSSSPAQKLKLRKPHIHKLVNGELGWTQLL 718
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: A0A418ATP0_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A418ATP0_9STRA) HSP 1 Score: 376 bits (965), Expect = 6.580e-123 Identity = 186/270 (68.89%), Postives = 222/270 (82.22%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQNRLCVRKKHINDLHD---PNYGWTNLMQQ 267
G KRLDLAG LL GLFR LF+KLT++V+ YLQ C+D F + AIKS+ I++GL+YSLATGNWG +K A+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQAKPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG +PILEFLEEW+ ENL+EI +I + TK+FVNGNWVGVHR+PN LV+TL RR +DID EVSV+RD+ +ELR+YTDAGRVCRPLF+VE NRL ++K+H+ L + ++ W NL+ +
Sbjct: 43 GNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQIIP--TATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENNRLLLQKQHVVKLQNHKHTHFRWQNLLTE 310
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: F0YGN2_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGN2_AURAN) HSP 1 Score: 387 bits (995), Expect = 6.910e-123 Identity = 193/279 (69.18%), Postives = 221/279 (79.21%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQ--------------NRLCVRKKHINDLHDPNYGWTNLM 265
GKKRLDLAG LL GLFR LFRKLT++V YLQ C+D F + +AIKS+ +TDGL+YSLATGNWGD+KDA++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG SPILEFLEEW+MENL+EI+P IA TK+FVNG+WVGVHRDP+ L TL RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL +VE L +RK H+ L + + GWT L+
Sbjct: 437 GKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDDGRDFNLASAIKSRVVTDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVEAASTVTRVRSQEATFQELRLRKSHVQKLVNGDLGWTQLL 715
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: A0A7S2F9I8_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F9I8_9STRA) HSP 1 Score: 383 bits (983), Expect = 1.850e-122 Identity = 192/274 (70.07%), Postives = 223/274 (81.39%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQN-----RLCVRKKHINDL--HDPNYGWTNLMQQ 267
GKKRLDLAG LLAGLFR LFRKLT++VRKYLQ CLD+ F V TAIKS+ ++DGLKYSLATGNWGD+++ ++AGVSQVLNRL YAS LSHLRRLNTPLGREGKQA PRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYISVG + +PILEFL+EW+ME+L+EI P +I+ TK+ VNGNWVG+HRDP RL QT+ RR LD D EVSVVRDIK ELR+YTDAGRVCRPLF+VE++ RL V+K H L + Y W+NL +
Sbjct: 252 GKKRLDLAGPLLAGLFRLLFRKLTKDVRKYLQRCLDERKPFNVTTAIKSRTLSDGLKYSLATGNWGDRRNPSRAGVSQVLNRLAYASTLSHLRRLNTPLGREGKQAGPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYISVGSAQAPILEFLDEWSMEHLEEIQPAVISDPGTTKILVNGNWVGIHRDPERLCQTMRALRRRLDFDPEVSVVRDIKESELRIYTDAGRVCRPLFIVEKDDYGLQRLKVKKSHTRRLLSDEEKYRWSNLTME 525
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: A0A6A4ZKU8_9STRA (DNA-directed RNA polymerase (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZKU8_9STRA) HSP 1 Score: 375 bits (964), Expect = 1.560e-121 Identity = 186/270 (68.89%), Postives = 221/270 (81.85%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQNRLCVRKKHINDLHD---PNYGWTNLMQQ 267
G KRLDLAG LL GLFR LF+KLT++V+ YLQ C+D F + AIKS+ I++GL+YSLATGNWG +K A+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQAKPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG +PILEFLEEW+ ENL+EI +I + TK+FVNGNWVGVHR+PN LV+TL RR +DID EVSV+RD+ +ELR+YTDAGRVCRPLF+VE NRL ++K+H+ L + + W NL+ +
Sbjct: 344 GNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQIIP--TATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENNRLLLQKQHVVKLQNHKHTQFRWQNLLTE 611
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Match: A0A425D5T0_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D5T0_9STRA) HSP 1 Score: 375 bits (964), Expect = 1.200e-120 Identity = 186/270 (68.89%), Postives = 221/270 (81.85%), Query Frame = 0
Query: 1 GKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKSTQFVVGTAIKSQFITDGLKYSLATGNWGDKKDATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTSCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEQNRLCVRKKHINDLHD---PNYGWTNLMQQ 267
G KRLDLAG LL GLFR LF+KLT++V+ YLQ C+D F + AIKS+ I++GL+YSLATGNWG +K A+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQAKPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG +PILEFLEEW+ ENL+EI +I + TK+FVNGNWVGVHR+PN LV+TL RR +DID EVSV+RD+ +ELR+YTDAGRVCRPLF+VE NRL ++K+H+ L + + W NL+ +
Sbjct: 394 GNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQIIP--TATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENNRLLLQKQHVVKLQNHKHTQFRWQNLLTE 661 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24352.6596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig24352.6596.1 ID=prot_H-paniculata_contig24352.6596.1|Name=mRNA_H-paniculata_contig24352.6596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=267bpback to top |