mRNA_H-paniculata_contig24182.6549.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A485KRV8_9STRA (Aste57867_11051 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRV8_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 4.720e-8 Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 19 GSLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFR 153
GSLD+DFALDL+ VADQYL++ LKR CE AI K+I + FT++ +
Sbjct: 481 GSLDVDFALDLISVADQYLLDNLKRKCEFAIQKSIDMSNFTIMIK 525
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A6H5JNV5_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV5_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 1.630e-7 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 13 GGGSLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFREREG 165
G SLDL+F LDL+D++DQYL+ +LKRLCE A+++ ITV+ +F E
Sbjct: 271 GADSLDLEFCLDLMDLSDQYLMGSLKRLCEDAVLRNITVKNACELFVTAEA 321
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A7S2RFP8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RFP8_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 4.230e-7 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 22 SLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFR 153
++DLDFALDLL +ADQ+LVE LK LCE +I K+ITV V+FR
Sbjct: 517 TVDLDFALDLLVLADQFLVERLKTLCEISIQKSITVENVAVMFR 560
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: UPI0010AAA02E (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X1 n=2 Tax=Malus domestica TaxID=3750 RepID=UPI0010AAA02E) HSP 1 Score: 52.4 bits (124), Expect = 2.030e-6 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 13 GGGSLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFREREG 165
G +++D A DLL ADQYL+E LKRLCEHAIV+ I V +++F E
Sbjct: 605 GSVDVNMDIAQDLLRAADQYLLEGLKRLCEHAIVQDICVENLSLMFEFSEA 655
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A498K8W3_MALDO (BTB domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498K8W3_MALDO) HSP 1 Score: 52.4 bits (124), Expect = 2.040e-6 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 13 GGGSLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFREREG 165
G +++D A DLL ADQYL+E LKRLCEHAIV+ I V +++F E
Sbjct: 605 GSVDVNMDIAQDLLRAADQYLLEGLKRLCEHAIVQDICVENLSLMFEFSEA 655
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A540MKJ4_MALBA (BTB domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MKJ4_MALBA) HSP 1 Score: 52.0 bits (123), Expect = 2.790e-6 Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 13 GGGSLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFREREG 165
G ++++D A DLL ADQYL+E LKRLCEHAIV+ I V + +F E
Sbjct: 607 GSVNVNMDIAQDLLRAADQYLLEGLKRLCEHAIVQDICVENLSFMFEFSEA 657
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A8K0DT87_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0DT87_9ROSA) HSP 1 Score: 51.6 bits (122), Expect = 3.800e-6 Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 13 GGGSLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFREREG 165
G +D+D A DLL ADQYL+E LKRLCEHAI + I+ +V++ E
Sbjct: 657 GSIGVDIDIAQDLLMAADQYLLEGLKRLCEHAIAQNISAENVSVLYELSEA 707
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A7S2B942_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B942_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 4.710e-6 Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 1
Query: 25 LDLDFALDLLDVADQYLVEALKRLCEHAIVKTITV 129
L +DFAL LL VADQYLVEALKR CE +I K+ITV
Sbjct: 53 LSIDFALSLLAVADQYLVEALKRKCEVSIQKSITV 87
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A498ILU7_MALDO (BTB domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498ILU7_MALDO) HSP 1 Score: 51.2 bits (121), Expect = 5.220e-6 Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 19 GSLD--LDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFREREG 165
GS+D LD A DLL ADQYL+E LKRLCEHAI + I V +++F E
Sbjct: 607 GSVDVTLDIAQDLLRAADQYLLEGLKRLCEHAIAQDICVENLSLMFELSEA 657
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Match: A0A7S2V1B2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1B2_9STRA) HSP 1 Score: 50.8 bits (120), Expect = 7.090e-6 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 22 SLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITV 129
S+DL FALDLL +ADQ+LVEALKR CE AI K+I+V
Sbjct: 478 SVDLGFALDLLTLADQFLVEALKRRCETAIQKSISV 513 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24182.6549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24182.6549.1 >prot_H-paniculata_contig24182.6549.1 ID=prot_H-paniculata_contig24182.6549.1|Name=mRNA_H-paniculata_contig24182.6549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp MALGGGGSLDLDFALDLLDVADQYLVEALKRLCEHAIVKTITVRLFTVIFback to top mRNA from alignment at H-paniculata_contig24182:281..448- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24182.6549.1 ID=mRNA_H-paniculata_contig24182.6549.1|Name=mRNA_H-paniculata_contig24182.6549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=168bp|location=Sequence derived from alignment at H-paniculata_contig24182:281..448- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24182:281..448- >mRNA_H-paniculata_contig24182.6549.1 ID=mRNA_H-paniculata_contig24182.6549.1|Name=mRNA_H-paniculata_contig24182.6549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=336bp|location=Sequence derived from alignment at H-paniculata_contig24182:281..448- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |