mRNA_H-paniculata_contig24118.6529.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: A0A6H5JZ81_9PHAE (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ81_9PHAE) HSP 1 Score: 175 bits (443), Expect = 4.740e-51 Identity = 91/171 (53.22%), Postives = 107/171 (62.57%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAH---------------------------------------------GIAGDKVWKSTAEERQLYSSITRRIEEALLEL 378
+ PEGHCEQ G+LGGRAAG RD+HGRLKWGVGK+IAHA V P+VIP+FHTGMAN++P+NP TRK++H +PR G TVTARAG AI FDDLLE H G GD +W+ST EERQLYS I RR+EEALL+L
Sbjct: 186 IFPEGHCEQGGSLGGRAAGAGRDEHGRLKWGVGKMIAHAPVTPVVIPLFHTGMANLVPINPLTRKILHALPRMGHTVTARAGRAITFDDLLEDHERRHGRLRKLALPPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEGDVLWRSTREERQLYSRIARRVEEALLQL 356
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: F0WJG4_9STRA (Tafazzin family protein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJG4_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.200e-28 Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAHGIAGDKV-----WKSTAEERQLYSSITRRIEEALLEL 378
+ PEG QDG+LGGR G +RDK GRLKWGVGKLIA A PP+VIPI+H M ++P + ++I+ +PRT V R G I F+DL + + K W S +E+ LYS+ITRRIEEALL L
Sbjct: 185 IFPEGKITQDGSLGGRE-GADRDKIGRLKWGVGKLIARADTPPVVIPIYHFNMNKLMPQDE-NNEVINVLPRTNNEVFVRVGQPIDFEDLFQEYEKERVKASNASSWDSEEKEKVLYSAITRRIEEALLNL 313
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: A0A835ZF50_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF50_9STRA) HSP 1 Score: 112 bits (281), Expect = 7.390e-28 Identity = 62/138 (44.93%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAHGIAGDKVWK---------------STAEERQLYSSITRRIEEAL 369
+ PEG Q G +GGR G N + G LKWGVGKLIAHA V P ++PI+HTGM NV+P +P TR ++ P P TG +T R G I DDL+E + A +WK S+++E LY++ITRR++ AL
Sbjct: 126 IFPEGRTVQLGHMGGRM-GKNEAEIGTLKWGVGKLIAHAPVRPEIVPIYHTGMQNVVPEHPVTRDVLSPKPGTGHEITFRVGHPIVVDDLIEQYEKANGPLWKYTPSVAKDPPRFSWRSSSKELALYAAITRRVQTAL 262
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: A0A485K8L0_9STRA (Tafazzin family protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8L0_9STRA) HSP 1 Score: 113 bits (283), Expect = 7.900e-28 Identity = 69/133 (51.88%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAH------GIAGDK-VWKSTAEERQLYSSITRRIEEALLEL 378
+ PEG Q GALGGR GP GRLKWGVGKLIA A V P+V+PI+H GM +V+P K+ IPRTG+ V A G I+FDDL + + GI+GD W S +E++LYS+ITRRIE ALL L
Sbjct: 187 VFPEGKIVQGGALGGRD-GPTATTIGRLKWGVGKLIARADVTPVVLPIYHLGMDHVMPQTQH-HKLRSIIPRTGQRVHALVGDPIYFDDLFQKYEADRRQGISGDGYTWDSDEQEKKLYSAITRRIELALLAL 317
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: A0A024T9Q2_9STRA (Tafazzin family protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9Q2_9STRA) HSP 1 Score: 113 bits (283), Expect = 8.310e-28 Identity = 68/133 (51.13%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAH------GIAGDK-VWKSTAEERQLYSSITRRIEEALLEL 378
+ PEG Q GALGGR GP GRLKWGVGKLIA A + P+V+PI+H GM V+P K+ IPR G+ V G+ I+FDDL + + GIAGD W+S A E++LYS+ITRRIE ALL L
Sbjct: 187 IFPEGKIVQGGALGGRD-GPEATTIGRLKWGVGKLIARAEITPVVLPIYHVGMDKVMPQTA-EHKLKSVIPRVGQRVHVVVGSPIYFDDLFKKYEADRRQGIAGDGFTWESGAAEKKLYSAITRRIELALLAL 317
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: W4G9P0_9STRA (Tafazzin family protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9P0_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.140e-27 Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAH------GIAGDK-VWKSTAEERQLYSSITRRIEEALLEL 378
+ PEG Q G LGGR GP+ GRLKWGVGKLIA A + P+V+PI+H GM V+P P K+ +PR G+ V G+ I+FDDL + + G+ GD W+S A E++LYS+ITRRIE ALL L
Sbjct: 187 IFPEGKIVQGGGLGGRD-GPDAATIGRLKWGVGKLIARAEITPVVLPIYHVGMDKVMPQTP-DHKLKSIVPRLGQRVHVLVGSPIYFDDLFKKYEADRRQGVQGDGFTWESDAAEKKLYSAITRRIELALLAL 317
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: A0A5D6XH08_9STRA (Tafazzin family protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH08_9STRA) HSP 1 Score: 108 bits (270), Expect = 4.450e-26 Identity = 59/129 (45.74%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEA---HGIAGDKVWKSTAEERQLYSSITRRIEEALLEL 378
+ PEG Q LGGR + P R++ GRLKWGV KLIA A V P+V+P +H M V+P N ++I +P TG V+ R G + FDDL +A + G W++ ER LY +IT+RIE+ALLEL
Sbjct: 183 IFPEGKICQQEVLGGRES-PRREEIGRLKWGVAKLIARARVRPVVVPFYHHNMERVMPQNA-QNQLISMVPTTGNDVSVRVGVPLSFDDLFDAFEKERVVGAAPWRTQERERALYQAITKRIEDALLEL 309
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: A0A024GSB4_9STRA (PlsC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSB4_9STRA) HSP 1 Score: 110 bits (276), Expect = 8.220e-26 Identity = 64/131 (48.85%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAHGIAGDKV-----WKSTAEERQLYSSITRRIEEALLEL 378
+ PEG QDG+LGGR GP+RDK GRLKWGVGKLIA A P+VIPI+H M ++P + ++I+ +PR V R G I F+DL + K W S +E+ LYS+ITRRIEEALL L
Sbjct: 509 IFPEGKITQDGSLGGRE-GPDRDKIGRLKWGVGKLIARADTTPVVIPIYHVNMNKLMPQDE-NNEVINVLPRANNHVFVRVGQPIDFEDLFREYEKERVKASNAASWDSEEKEKILYSAITRRIEEALLNL 637
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: K3WZT1_GLOUD (Tafazzin family protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZT1_GLOUD) HSP 1 Score: 107 bits (267), Expect = 1.290e-25 Identity = 57/129 (44.19%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAHG---IAGDKVWKSTAEERQLYSSITRRIEEALLEL 378
+ PEG Q+ LGGR + P R++ GRLKWGVGKLIA A+V P+V+P +H M V+P N ++I +P+T + R G I FDDL +A+ + G W++ E+ L+ +IT+RIE+ALLEL
Sbjct: 183 IFPEGKIVQNEMLGGRES-PRREEIGRLKWGVGKLIARASVRPVVVPFYHHNMEKVMPQNE-KNQLISVVPKTNVDIRVRVGEPISFDDLFDAYEKSRVVGATPWQTQEREKALFQAITKRIEDALLEL 309
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Match: A0A8K1FKE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKE6_PYTOL) HSP 1 Score: 107 bits (267), Expect = 1.810e-25 Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 1 LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHTGMANVIPLNPFTRKMIHPIPRTGKTVTARAGAAIHFDDLLEAHG----IAGDKVWKSTAEERQLYSSITRRIEEALLEL 378
+ PEG EQ LGGR+ GP + GRLKWGVGKL+A A V P+V+PI+HT M ++P + +I IP+ G +T R G I FDDL E H + W++ E LYS+IT RIEE+LL+L
Sbjct: 206 IFPEGKIEQRMILGGRS-GPRTKEIGRLKWGVGKLVARADVRPVVVPIYHTNMQKIMPQDE-DNHIISMIPQFGANITIRVGKPISFDDLFEKHRDGRVVGSVAEWETQEREEALYSAITMRIEESLLDL 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24118.6529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24118.6529.1 >prot_H-paniculata_contig24118.6529.1 ID=prot_H-paniculata_contig24118.6529.1|Name=mRNA_H-paniculata_contig24118.6529.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp LLPEGHCEQDGALGGRAAGPNRDKHGRLKWGVGKLIAHAAVPPLVIPIFHback to top mRNA from alignment at H-paniculata_contig24118:600..1088+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24118.6529.1 ID=mRNA_H-paniculata_contig24118.6529.1|Name=mRNA_H-paniculata_contig24118.6529.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=489bp|location=Sequence derived from alignment at H-paniculata_contig24118:600..1088+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24118:600..1088+ >mRNA_H-paniculata_contig24118.6529.1 ID=mRNA_H-paniculata_contig24118.6529.1|Name=mRNA_H-paniculata_contig24118.6529.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at H-paniculata_contig24118:600..1088+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |