mRNA_H-paniculata_contig2411.6528.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 601 bits (1549), Expect = 2.550e-196 Identity = 347/761 (45.60%), Postives = 483/761 (63.47%), Query Frame = 2
Query: 41 EAVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCPSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKR--------LLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAIC-AKDRSLGAEDM---DLSNLHSLATTM--MESGRQDEAEQLFRQAVEVCEAKVGPDDERV 2275
+A A +A +M A ADV +AD+GE LP + VL +R IR+KVE N DL LHQRCTY+ AC IVKC+ + LDV+PL +CV V++ VE +RG + RV+K+ DK +I +L RL +L DL LAG+ ++ + + +R+ QE H E +A+ I + K K A VPKGTP +SW+V R V + V + L G P +VGLVG+SG+GKTTAA +V S E FSDGIVWL VN G D L LM QLA M+ +DI GS G P+G DG +AY+K++VE G+GGKG +CLVVAD+VW+++V+ L ETGMW+L +TR+E L++ +GE VG+D+LS+ A SVLR A+EL LPD A +L+ELCG +AM++AFVGRWS VR R+D +AWS AA +R E+ + A + + + RR ++L+AGF L G+ ++ VQ LYL+LAV+PDGH F+++DA VL+Y +E EDE +V V++ LERW+I+R+ + Y HDAH NFARESL DRGD+RRPA+ R V ISSLE L ++RY L LW V+ VGG G +RPY+ AL ++D+S+ + R+ + V F+EA EDW GA RRLL +E+ LG +H +V NT LA AE + +EAKEW R+Q +AL A+ A+ + +G+E D +L SLA T+ + G + EAE L R+++E+ A++ DD +V
Sbjct: 7 DATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDG-LAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEAT-----YRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQV 761
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 584 bits (1506), Expect = 1.950e-190 Identity = 336/757 (44.39%), Postives = 473/757 (62.48%), Query Frame = 2
Query: 41 EAVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCPSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAICAKDR----SLGAEDMDLSNLHSLATTMME--SGRQDEAEQLFRQAVEVCEAKVGPDDERVGYAL 2287
++ + AA LAL + +D D+GE LP + V ++ IR VE +N+ +L +L QRCTY+ AC +VKC+ S +DV+PL +CV E C +RG + RVIK+ DK EIA L+ + LTTDLGLAG+ +EGKVD++K+ L RI E + ++ K A VP G P R+SW+V R V + L +V L G SGSGKTT A E+VRS E E FSDGIVWL VN GAK RL SLM QLA M+H++I GS G VP+ D YIK+R+E+G+ G+ +CLVVAD+VW+ +V+ L ETGMWVL +TR+E +++ G++V +D+LS+ A SVL+ A+ELP + LPD A++L++LCG +AM++AFVGRWS VR R DP++WS AA++IRTE++ + + DS + ++RR ++L+ GF L G+ ++ VQ LYL+LAVMPDGH FSL+DA VL+Y + S EDE + V+D+LERWSI+R+ G Y HDAH +FARE L DRG +RRPA+ RW ++SSL++L DRY L LW ++ +GG G +RPY+ AL M +SD +R V F+EA ED EGA + RRLL +E++ LG +H V NT LA AER+G+ +EA +W ++ E L A+ + L A+ D +L S+A T +E G + AE L R++++V EA +GP+ +V L
Sbjct: 7 DSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLE---------------SLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDS-ATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGT-----YRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEA-VGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGLEADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTL 741
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 575 bits (1483), Expect = 8.640e-189 Identity = 329/741 (44.40%), Postives = 469/741 (63.29%), Query Frame = 2
Query: 95 DVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCPSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESV-GIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDR-YELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAICAKDRSLGAEDMD----LSNLHSLATTMMESGRQDE--AEQLFRQAVEVCEAKVGPDDERVGYAL 2287
DV + + +GLP + VL ++ + +L+QRCTY+ CVIV+C++ S L +PL+ECV V VE C +RG L RV+K+ +DK+EIA L +RL +L DL LAG+ V GKV++LK LL+ + Q H++ +A + A + + A VP GTPAR+SW+V R V + VC+ L G PR+VGLVG+SGSGKTTAA E+VRS E E FSDGIVWL+VN+GA +RL +LM LA ++ +DI GS G PAG DG AY ++R++ G+GGKG +CLVVAD+VW+ V+ L ETGMWVL +TR+E L+ +G V G+D+LS++ A+SVLR ASEL LPD A+ELVELCG +AM++AFVGRWS VR R D +AWS AA +R++++ +++ D+ ++++ RR +VL+AGF L G+ ++ + LYL+LAV+PDGH F+ +DAT L+Y + PEDE + E ++ LERWS +R GA Y HDAH FAR+ + DRG +R+PAV RW +SSL+VL D + L LW V +GG+ R RPY ALS MD+S+ + K + + F++A DW+ A D RR+L ++++ LG +H H TLR L AER+G+++E EW+ + L A+ L A ++D + L+S+A+TM+ D AE L R ++E+ E K+G DD V Y L
Sbjct: 11 DVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDG-AAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVS---DNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGA-----YRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESN-PLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNL 741
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 535 bits (1379), Expect = 1.920e-171 Identity = 306/675 (45.33%), Postives = 431/675 (63.85%), Query Frame = 2
Query: 44 AVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVR-------TIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCP-SVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDG----ARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLL 2026
A + L L+M AT D MA++GE LP+ VL +R IR+ VE +N+ +L +L++RC Y+ ACV+VK ++ S +D++P+ EC+ ++VE CG RG + RV+ + DK+EIA + + +L DL LAGV +EGK +L +++R+ NQ +A I + KT K A++PK TP R+SW+V R V + V E L G P +VGLVG+SGSGKTTAA E+VRS E + FSDG+VWLTVN+GAKDRL SLM QLA M+ +++ G P + D G AYIK+++++G+GGKG +CLVVAD+VW+ EV+ L ETGMWVL +TR+E L+ +GE VG+D++S+ A SVLR ASELP T LPD A++L+ELCG +AM++AFVGRWS VR R D +AWS AA +R E+ ++ + E + RR +VL+AGF L G+ ++ VQ LYL+LAV+PDG F+++DA VL+Y ++ S EDE + V++ILERWS++R+ G A Y HDAH +FARE L DRGD+RRPA+ RW +ISSL+ L + +++ LW V+ VGG G + +RPY+ AL+ M+DSD + V+ V F+ EDWE A RRLL M +G V +L L
Sbjct: 8 AAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEV-GGRRPATS---DDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSD-PLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVGPYSLSVIRSLHEL 677
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 491 bits (1264), Expect = 1.240e-155 Identity = 287/605 (47.44%), Postives = 388/605 (64.13%), Query Frame = 2
Query: 503 QRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAIC---AKDRSLGAEDMDLSN-LHSLATTMME----SGRQDEAEQLFRQAVEVCEAKVGPDDERVGYAL 2287
+RI++NQ +++ D + KT K +VPKGTPAR+SWYV+R V V E L G PR+VGLVG SGSGKTT A E VRS E E FSDGI WL+VN+GAK+RLSSLM QLA ++++DI S G P D AYI++R++KG GGK +CLVVAD+VW+ EV+ L ETGMWVL +TRN L+ + GE VG+D+LS+ A+SVLR A+ELP +P A++L+ELCG +AM++AFVGRWS VR R+D AWS A + +R E+ + + E + RR ++LRAGF L G+ ++ VQ LYL+LAV PDGH F++RDA VL+Y +E EDE +V V+D LERW+++R+ GA Y HDAH FARE+L D G +RRPAV RWV IS LEVL D Y L LW V+ VGG G SR Y AL MD + R+ ++ + +EA+EDWEGA RRLL +E++ LG +H HV + R LA AE++G EA +WR ++ EAL A+ ++ S E +D +N L S+A+TM++ S + +AE L R+++E+ EA +G +D V L
Sbjct: 10 ERILENQ--------SKILDHMDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDC-AAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGA-----YRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTL 600
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 436 bits (1122), Expect = 1.560e-134 Identity = 293/782 (37.47%), Postives = 431/782 (55.12%), Query Frame = 2
Query: 44 AVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCP-SVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDG----ARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSD-----------FEVRRKGVLKVMGFREANEDW------EGAYDARRRLLGMEQQTLGTEHGHVANTL--------------------RLLADLAERIGHSD--EAKEWRRQQTEALDAAICAKDRSLGAEDMDLSNLHSLATTMMESGRQDEAEQLFRQAVEVCEAK 2251
A + LAL+M AT D +AD+ E LP+ N+ +L +L++RC ++ CVIVK ++ S +DVSP+ EC+ ++VE CG RG + RV+ + DKD+IA + + +L +L LAGV +EGK +L+ ++R+ Q +A I + KT K A++PK TP +SW+V R V + V E L G P +VGLVG+SGSGKTTAA E+VRS E DRL SLM QLA M++++I G P + D G AYIK+R+ +G+GG+G +CL V D+VW+ EV+ L E GMWVL +TR+E L+ +GE V +++LS+ A SVLR A+ELP T LPD A++L+ELCG +AM++AF GR S VR R D +AWS+AA+ +RTE+ + + E + RR +V++AGF L G+ ++ VQ LYL+LAV+PDG F+++DA VL+Y + S EDE + V++ILERWS + + G A Y HDAH +FARE L DRGD+ RPA+ RW +ISS++ L + +E+ LW + VGG G +++RPY+ AL+ ++DSD +VR + + E + E A + R L + LG H VA TL R LA ++G E +E ++ E ++A+ A D A+ L L M ++GR D+AE L R+ +++ E +
Sbjct: 8 AAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEI-GGRRPATS---DDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLDLSGCVRAAGQFAQAXXXXXRCLATREAKLGPRGLVETEELLARRLEIVEAST-ALDHEHVAD-----VLFDLGRCMRQAGRMDKAEGLLRRCLKIHEVR 741
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 414 bits (1065), Expect = 2.430e-130 Identity = 259/628 (41.24%), Postives = 357/628 (56.85%), Query Frame = 2
Query: 170 IRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCP--SVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQ---QTLGTEHGHVANTLRLLAD 2032
+R+ VE +++L +L +RCTYM AC+I K + S +VSPL +CV + ++ VE KR ++++V NQ E +A I + K K+A VP+GTP R+SW+V R V + V E L PR+VGLVG+SG+GKTTAA ELVRS E FSDGIVWLTVN GA RL SLM QLA M+ +DI G G P G AYIK+R+E G+GGKG +CL VAD+VW+ EV+ L +TGM VL +TR+E L+ G V +D+LS A SVLR A+ELP LPD A++L++LCG +AM++AFVGRWS VR R D AWS AAA +R E+ ++ + +D R RR ++L+AG L G+ ++ VQ LYL+LAV+PD + DA +L+Y ++ + EDE++V VLD+LERWS++R+ KY HD FAR SL DRGD+RR A+ RWV +ISSL+ + + L W V+ VGG+G + P + AL+ MDD + + ++ + V EA+EDWE A R LG+ Q+L + H LR L +
Sbjct: 1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVER-----------------------------------------------RKKRTMEQMVQNQAAARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVERH-VTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDIVDGAR---GNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRS----TWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPE-PLLQESIAAVAKAHEAHEDWEKASTIWHRSLGVSTWWGQSLDGDDEHRFRALRALEE 572
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 417 bits (1071), Expect = 1.880e-127 Identity = 286/784 (36.48%), Postives = 413/784 (52.68%), Query Frame = 2
Query: 44 AVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKC-QRCPSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQ---AQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELV------------------RSGETLEFFSDGIVWLTVNNG--AKDRLSSLMWQLATMLHDDILGSTGPVP-AGFGDGGVAYIKKRVE-KGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATID-SPREVQSQRRISVLRAGFRYLGAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYG----QEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEV--RRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAICAKDRSLGAEDMDLSNLHSLATTMMESGRQ-------DEAEQLFRQAVEVCEAKVGPDDERV 2275
A AA + L+M AD+ + ++G +P VG VL ++ IR + EA SN L +L +RCTY+ ACVIVK Q S ++V+PL CV + + C +RG R K+ D DE+ L+ R+ +LT DLGLAG+ +++ KVD+LK +L + I Q T P A VP G P SW+V R+RV V E L G +P++VGLVG SGSGKTT A +V R E F DG+VWL V G + +R+ +LM QLA + +D+ S G P A GG A+I V KG+ RCLVVADDVW+ +++ LR TGMWVL T+R+ L+E V+G V +D+LSK A +LRGA+EL TG+ LP +A +++E C +A + FVGRWS V+ +D W+ A ++I E+ + A S ++ +R+++LRAGF L A N LYL+LAVMPDG F ++A V ++ + S + V+ LE+W++V + HDAH +FAR LK D+R A+ RW S L+ + MD +E+ LW +++GG+ RVSRPY AL S+ DS E K V++ G E WE +D RLL + Q+ EH V +TL L A + + +A RR+ + +DAA ++RS A S +A ++E G+Q DEA + +A+ + E + G D ER+
Sbjct: 51 APEEAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEV--------------------IAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGNL-----FRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEF-GINECA--WEVTHDVALRLLRV-QKDAAVEHAEVRHTLESLIHCANALNLNSDADAHRRELSLMVDAAW--ENRSNTAS----SPPRLVAKRLLERGQQLAITRRPDEAHEAISEALRLQEERSG-DFERL 798
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 367 bits (942), Expect = 1.910e-104 Identity = 251/672 (37.35%), Postives = 356/672 (52.98%), Query Frame = 2
Query: 116 DIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCP-SVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELV--RSGETLEFFSDGIVWLTVNN--GAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKR----EDPSAWSRAAASIRTELKTLKINATIDSPREVQSQ--RRISVLRAGFRYLGAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSD--FEVRRKGVLKVM-----GFR---EANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAK 2068
+IG P V + TA+ + V+AA+ NK +L+ LH+RC + VI K + S +DV PL ECV ++ +V E RG L R+ + + D ++I L +R+ ++ +GL+GVV K+D + LQ PK A VPK P +S++V R+ V VC+ L G P + L G SG+GKTT+A +V R F DG+VWL V G DRL SLM LA LH+D++ G V A GD GV+Y++K V + + RCLVVADDVW+A V+ LRETGMWVL TTR + E E V +D L A VLRGA+ELP G L D++++++E+CG +AM+ AFVG W++VR + AW R + ++ ++ + + E + R++VLRAGF+Y+G + Q LY+ LAV P+G LF DA VL+ E+E+ + + ILERW ++R KY THDAH +FAR+ L DR D+R PAV+RW EHIS L+ ++ + L +WR ++ VGGKG RPYD L M S+ G + V+ G R E E + RR L +E+ TLG + VA TL+ L G EA+
Sbjct: 32 EIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARLQ--------------------------PGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVM--KGAVDAPTGDDGVSYVRKIVSQ----EKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPE--ERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLL-------ENEEVAKGPISILERWGVLRTD----ASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPATSYATSGAVGVVMNLYRGARKLGELAEIMKRVEPLFRRALEIEEATLGPDDIQVAVTLQELGLCMRETGRPGEAE 658
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 350 bits (897), Expect = 5.570e-101 Identity = 261/779 (33.50%), Postives = 399/779 (51.22%), Query Frame = 2
Query: 26 MANGLEAVSHAANLA-LRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRC-PSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGET-------------------LEF----FSDGIVWLTVNNG--AKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVE-LCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYLGAVNDHV-QWLYLALAVMPDGHLFSLRDATVLV---YGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGT-EHGH----VANTLRLLA--DLAERI---GHSDEAKEWRRQQTEALDAAICAKDRSLGAEDMDLSNLH-SLATTMMESGRQDEAEQLFRQAV 2233
MA +AV A A L +S VA + +IG P V + A+ + V+ A+ NK +L L +RC + VI K + S +DVSPL CV ++D+V + +G L R+ + + D D+I L R+ + +GLAGVV + ++++++++L R + + PK A VP G PA ++W+ R+ V+ V + L G P + L G+SG+GK+TAA ++VR+ + LE FSDG+V+L V G A DRL LM +LA LH+D+L T P G+ G +Y+KK + + RCLVVADDVW+ V+ L+ETGMWVL TTR ++E +G V +D+L+ A VLRGA+ELP G L D A+++++ +CG +AM+IAFVG WS VR +D AW+ A + I + ++ +A + +V +R+ +LRAGF YLG + Q LY+A+AV PDG+ F + DA VL+ + + +P + ++ILERW+++ KY HD H++FAR+ ++D+GD+R+P V RW IS L+ D Y L+ +WR V+ VGG G RPYD L SM + + L V+ Y+ ++L ME T EH + +R++A L + G E E RQ E DA++ GA LS+++ + +G E E R+A+
Sbjct: 79 MATRGDAVQSAQETARLGISTVVESVATGIIEIGAATPVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQILAR---------------------LQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILS-GDEPAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEA-GEKGESYVKKMMTRTK----KRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEG--VDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVREDADGMNDSQV---KRLGILRAGFDYLGEEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASG----KYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSMGS---DCSKSHALDVVA---------ELYEQEQKLAEMETLTREVLEHADDDAGADSCVRMVALWYLGRSLSIQGRLQEQGEASRQLGELFDASVKPSALDGGAAQAQLSSIYKAYGVCATAAGEWTEGESWLRKAL 809 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2411.6528.1 >prot_H-paniculata_contig2411.6528.1 ID=prot_H-paniculata_contig2411.6528.1|Name=mRNA_H-paniculata_contig2411.6528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=895bp MANGLEAVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRback to top mRNA from alignment at H-paniculata_contig2411:10099..20401- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2411.6528.1 ID=mRNA_H-paniculata_contig2411.6528.1|Name=mRNA_H-paniculata_contig2411.6528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10303bp|location=Sequence derived from alignment at H-paniculata_contig2411:10099..20401- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2411:10099..20401- >mRNA_H-paniculata_contig2411.6528.1 ID=mRNA_H-paniculata_contig2411.6528.1|Name=mRNA_H-paniculata_contig2411.6528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5370bp|location=Sequence derived from alignment at H-paniculata_contig2411:10099..20401- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |