mRNA_H-paniculata_contig2411.6528.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2411.6528.1
Unique NamemRNA_H-paniculata_contig2411.6528.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 601 bits (1549), Expect = 2.550e-196
Identity = 347/761 (45.60%), Postives = 483/761 (63.47%), Query Frame = 2
Query:   41 EAVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCPSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKR--------LLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAIC-AKDRSLGAEDM---DLSNLHSLATTM--MESGRQDEAEQLFRQAVEVCEAKVGPDDERV 2275
            +A    A +A +M  A ADV   +AD+GE LP +  VL  +R IR+KVE    N  DL  LHQRCTY+ AC IVKC+   + LDV+PL +CV  V++ VE   +RG + RV+K+  DK +I +L  RL +L  DL LAG+ ++   +    +          +R+   QE  H E +A+   I   + K   K A VPKGTP  +SW+V R  V + V + L   G P +VGLVG+SG+GKTTAA  +V S    E FSDGIVWL VN G  D L  LM QLA M+ +DI GS G  P+G  DG +AY+K++VE G+GGKG +CLVVAD+VW+++V+  L ETGMW+L +TR+E L++  +GE VG+D+LS+  A SVLR A+EL     LPD A +L+ELCG +AM++AFVGRWS VR R+D +AWS AA  +R E+    + A  +   + +  RR ++L+AGF  L  G+ ++ VQ LYL+LAV+PDGH F+++DA VL+Y +E   EDE +V  V++ LERW+I+R+ +       Y  HDAH NFARESL DRGD+RRPA+ R V  ISSLE L  ++RY L  LW  V+ VGG G   +RPY+ AL ++D+S+  + R+ +  V  F+EA EDW GA    RRLL +E+  LG +H +V NT   LA  AE   + +EAKEW R+Q +AL  A+  A+ + +G+E     D  +L SLA T+  +  G + EAE L R+++E+  A++  DD +V
Sbjct:    7 DATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDG-LAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEAT-----YRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQV 761          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 584 bits (1506), Expect = 1.950e-190
Identity = 336/757 (44.39%), Postives = 473/757 (62.48%), Query Frame = 2
Query:   41 EAVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCPSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAICAKDR----SLGAEDMDLSNLHSLATTMME--SGRQDEAEQLFRQAVEVCEAKVGPDDERVGYAL 2287
            ++ + AA LAL +    +D      D+GE LP +  V   ++ IR  VE   +N+ +L +L QRCTY+ AC +VKC+   S +DV+PL +CV       E C +RG + RVIK+  DK EIA L+  +  LTTDLGLAG+  +EGKVD++K+ L RI    E                + ++  K A VP G P R+SW+V R      V + L       +V L G SGSGKTT A E+VRS E  E FSDGIVWL VN GAK RL SLM QLA M+H++I GS G VP+   D    YIK+R+E+G+ G+  +CLVVAD+VW+ +V+  L ETGMWVL +TR+E +++   G++V +D+LS+  A SVL+ A+ELP  + LPD A++L++LCG +AM++AFVGRWS VR R DP++WS AA++IRTE++ +  +   DS   + ++RR ++L+ GF  L  G+ ++ VQ LYL+LAVMPDGH FSL+DA VL+Y +  S EDE +   V+D+LERWSI+R+  G      Y  HDAH +FARE L DRG +RRPA+ RW  ++SSL++L   DRY L  LW  ++ +GG G   +RPY+ AL  M +SD  +R      V  F+EA ED EGA  + RRLL +E++ LG +H  V NT   LA  AER+G+ +EA +W  ++ E L  A+   +      L A+  D  +L S+A T +E   G +  AE L R++++V EA +GP+  +V   L
Sbjct:    7 DSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLE---------------SLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDS-ATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGT-----YRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEA-VGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGLEADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTL 741          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 575 bits (1483), Expect = 8.640e-189
Identity = 329/741 (44.40%), Postives = 469/741 (63.29%), Query Frame = 2
Query:   95 DVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCPSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESV-GIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDR-YELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAICAKDRSLGAEDMD----LSNLHSLATTMMESGRQDE--AEQLFRQAVEVCEAKVGPDDERVGYAL 2287
            DV   + +  +GLP +  VL  ++ +               +L+QRCTY+  CVIV+C++  S L  +PL+ECV  V   VE C +RG L RV+K+ +DK+EIA L +RL +L  DL LAG+  V GKV++LK LL+ +   Q   H++ +A    + A +  +    A VP GTPAR+SW+V R  V + VC+ L   G PR+VGLVG+SGSGKTTAA E+VRS E  E FSDGIVWL+VN+GA +RL +LM  LA ++ +DI GS G  PAG  DG  AY ++R++ G+GGKG +CLVVAD+VW+  V+  L ETGMWVL +TR+E L+   +G  V G+D+LS++ A+SVLR ASEL     LPD A+ELVELCG +AM++AFVGRWS VR R D +AWS AA  +R++++  +++   D+  ++++ RR +VL+AGF  L  G+ ++ +  LYL+LAV+PDGH F+ +DAT L+Y +   PEDE + E ++  LERWS +R   GA     Y  HDAH  FAR+ + DRG +R+PAV RW   +SSL+VL   D  + L  LW  V  +GG+  R  RPY  ALS MD+S+  +  K +  +  F++A  DW+ A D  RR+L ++++ LG +H H   TLR L   AER+G+++E  EW+ +    L  A+      L A ++D     + L+S+A+TM+     D   AE L R ++E+ E K+G DD  V Y L
Sbjct:   11 DVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDG-AAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVS---DNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGA-----YRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESN-PLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVDGVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNL 741          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 535 bits (1379), Expect = 1.920e-171
Identity = 306/675 (45.33%), Postives = 431/675 (63.85%), Query Frame = 2
Query:   44 AVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVR-------TIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCP-SVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDG----ARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLL 2026
            A +    L L+M  AT D    MA++GE LP+   VL  +R        IR+ VE   +N+ +L +L++RC Y+ ACV+VK ++   S +D++P+ EC+    ++VE CG RG + RV+ +  DK+EIA +   + +L  DL LAGV  +EGK  +L  +++R+  NQ       +A    I   + KT  K A++PK TP R+SW+V R  V + V E L   G P +VGLVG+SGSGKTTAA E+VRS E  + FSDG+VWLTVN+GAKDRL SLM QLA M+ +++ G   P  +   D G AYIK+++++G+GGKG +CLVVAD+VW+ EV+  L ETGMWVL +TR+E L+   +GE VG+D++S+  A SVLR ASELP  T LPD A++L+ELCG +AM++AFVGRWS VR R D +AWS AA  +R E+  ++      +  E +  RR +VL+AGF  L  G+ ++ VQ LYL+LAV+PDG  F+++DA VL+Y ++ S EDE +   V++ILERWS++R+  G    A     Y  HDAH +FARE L DRGD+RRPA+ RW  +ISSL+ L  +  +++  LW  V+ VGG G + +RPY+ AL+ M+DSD  +    V+ V  F+   EDWE A    RRLL M    +G     V  +L  L
Sbjct:    8 AAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEV-GGRRPATS---DDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSD-PLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVGPYSLSVIRSLHEL 677          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 491 bits (1264), Expect = 1.240e-155
Identity = 287/605 (47.44%), Postives = 388/605 (64.13%), Query Frame = 2
Query:  503 QRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAIC---AKDRSLGAEDMDLSN-LHSLATTMME----SGRQDEAEQLFRQAVEVCEAKVGPDDERVGYAL 2287
            +RI++NQ        +++ D    + KT  K  +VPKGTPAR+SWYV+R  V   V E L   G PR+VGLVG SGSGKTT A E VRS E  E FSDGI WL+VN+GAK+RLSSLM QLA ++++DI  S G  P    D   AYI++R++KG GGK  +CLVVAD+VW+ EV+  L ETGMWVL +TRN  L+ +  GE VG+D+LS+  A+SVLR A+ELP    +P  A++L+ELCG +AM++AFVGRWS VR R+D  AWS A + +R E+  +      +   E +  RR ++LRAGF  L  G+ ++ VQ LYL+LAV PDGH F++RDA VL+Y +E   EDE +V  V+D LERW+++R+  GA     Y  HDAH  FARE+L D G +RRPAV RWV  IS LEVL   D Y L  LW  V+ VGG G   SR Y  AL  MD     + R+ ++ +   +EA+EDWEGA    RRLL +E++ LG +H HV  + R LA  AE++G   EA +WR ++ EAL  A+    ++  S   E +D +N L S+A+TM++    S  + +AE L R+++E+ EA +G +D  V   L
Sbjct:   10 ERILENQ--------SKILDHMDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDC-AAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGA-----YRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTL 600          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 1.560e-134
Identity = 293/782 (37.47%), Postives = 431/782 (55.12%), Query Frame = 2
Query:   44 AVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCP-SVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDG----ARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSD-----------FEVRRKGVLKVMGFREANEDW------EGAYDARRRLLGMEQQTLGTEHGHVANTL--------------------RLLADLAERIGHSD--EAKEWRRQQTEALDAAICAKDRSLGAEDMDLSNLHSLATTMMESGRQDEAEQLFRQAVEVCEAK 2251
            A +    LAL+M  AT D    +AD+ E LP+                    N+ +L +L++RC ++  CVIVK ++   S +DVSP+ EC+    ++VE CG RG + RV+ +  DKD+IA +   + +L  +L LAGV  +EGK  +L+  ++R+   Q       +A    I   + KT  K A++PK TP  +SW+V R  V + V E L   G P +VGLVG+SGSGKTTAA E+VRS E                   DRL SLM QLA M++++I G   P  +   D G AYIK+R+ +G+GG+G +CL V D+VW+ EV+  L E GMWVL +TR+E L+   +GE V +++LS+  A SVLR A+ELP  T LPD A++L+ELCG +AM++AF GR S VR R D +AWS+AA+ +RTE+   +      +  E +  RR +V++AGF  L  G+ ++ VQ LYL+LAV+PDG  F+++DA VL+Y +  S EDE +   V++ILERWS + +  G    A     Y  HDAH +FARE L DRGD+ RPA+ RW  +ISS++ L  +  +E+  LW   + VGG G +++RPY+ AL+ ++DSD            +VR   +  +    E    +      E A +  R  L +    LG  H  VA TL                    R LA    ++G     E +E   ++ E ++A+  A D    A+      L  L   M ++GR D+AE L R+ +++ E +
Sbjct:    8 AAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEI-GGRRPATS---DDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLDLSGCVRAAGQFAQAXXXXXRCLATREAKLGPRGLVETEELLARRLEIVEAST-ALDHEHVAD-----VLFDLGRCMRQAGRMDKAEGLLRRCLKIHEVR 741          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 2.430e-130
Identity = 259/628 (41.24%), Postives = 357/628 (56.85%), Query Frame = 2
Query:  170 IRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCP--SVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGETLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYL--GAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQ---QTLGTEHGHVANTLRLLAD 2032
            +R+ VE     +++L +L +RCTYM AC+I K +     S  +VSPL +CV + ++ VE                                                  KR ++++V NQ     E +A    I   + K   K+A VP+GTP R+SW+V R  V + V E L     PR+VGLVG+SG+GKTTAA ELVRS    E FSDGIVWLTVN GA  RL SLM QLA M+ +DI G  G  P   G    AYIK+R+E G+GGKG +CL VAD+VW+ EV+  L +TGM VL +TR+E L+    G  V +D+LS   A SVLR A+ELP    LPD A++L++LCG +AM++AFVGRWS VR R D  AWS AAA +R E+  ++ +  +D  R     RR ++L+AG   L  G+ ++ VQ LYL+LAV+PD     + DA +L+Y ++ + EDE++V  VLD+LERWS++R+        KY  HD    FAR SL DRGD+RR A+ RWV +ISSL+ +   +   L   W  V+ VGG+G   + P + AL+ MDD +  + ++ +  V    EA+EDWE A     R LG+     Q+L  +  H    LR L +
Sbjct:    1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVER-----------------------------------------------RKKRTMEQMVQNQAAARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVERH-VTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDIVDGAR---GNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRS----TWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPE-PLLQESIAAVAKAHEAHEDWEKASTIWHRSLGVSTWWGQSLDGDDEHRFRALRALEE 572          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 1.880e-127
Identity = 286/784 (36.48%), Postives = 413/784 (52.68%), Query Frame = 2
Query:   44 AVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKC-QRCPSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQ---AQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELV------------------RSGETLEFFSDGIVWLTVNNG--AKDRLSSLMWQLATMLHDDILGSTGPVP-AGFGDGGVAYIKKRVE-KGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATID-SPREVQSQRRISVLRAGFRYLGAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYG----QEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEV--RRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAICAKDRSLGAEDMDLSNLHSLATTMMESGRQ-------DEAEQLFRQAVEVCEAKVGPDDERV 2275
            A   AA + L+M    AD+ +   ++G  +P VG VL  ++ IR + EA  SN   L +L +RCTY+ ACVIVK  Q   S ++V+PL  CV   +  +  C +RG   R  K+  D DE+  L+ R+ +LT DLGLAG+ +++ KVD+LK +L  +                    I Q T P     A VP G P   SW+V R+RV   V E L  G +P++VGLVG SGSGKTT A  +V                  R     E F DG+VWL V  G  + +R+ +LM QLA  + +D+  S G  P A    GG A+I   V  KG+     RCLVVADDVW+ +++  LR TGMWVL T+R+  L+E V+G  V +D+LSK  A  +LRGA+EL TG+ LP +A +++E C  +A  + FVGRWS V+  +D   W+ A ++I  E+  +   A    S  ++   +R+++LRAGF  L A N     LYL+LAVMPDG  F  ++A V ++     +  S    +    V+  LE+W++V           +  HDAH +FAR  LK   D+R  A+ RW    S L+ +  MD +E+  LW   +++GG+  RVSRPY  AL S+ DS  E     K V++  G  E    WE  +D   RLL + Q+    EH  V +TL  L   A  +  + +A   RR+ +  +DAA   ++RS  A     S    +A  ++E G+Q       DEA +   +A+ + E + G D ER+
Sbjct:   51 APEEAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEV--------------------IAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGNL-----FRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEF-GINECA--WEVTHDVALRLLRV-QKDAAVEHAEVRHTLESLIHCANALNLNSDADAHRRELSLMVDAAW--ENRSNTAS----SPPRLVAKRLLERGQQLAITRRPDEAHEAISEALRLQEERSG-DFERL 798          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 367 bits (942), Expect = 1.910e-104
Identity = 251/672 (37.35%), Postives = 356/672 (52.98%), Query Frame = 2
Query:  116 DIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCP-SVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELV--RSGETLEFFSDGIVWLTVNN--GAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCGHLAMNIAFVGRWSAVRKR----EDPSAWSRAAASIRTELKTLKINATIDSPREVQSQ--RRISVLRAGFRYLGAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSD--FEVRRKGVLKVM-----GFR---EANEDWEGAYDARRRLLGMEQQTLGTEHGHVANTLRLLADLAERIGHSDEAK 2068
            +IG   P V  + TA+   +  V+AA+ NK +L+ LH+RC  +   VI K +    S +DV PL ECV ++ +V E    RG L R+ + + D ++I  L +R+ ++   +GL+GVV    K+D +   LQ                            PK A VPK  P  +S++V R+ V   VC+ L   G P +  L G SG+GKTT+A  +V  R       F DG+VWL V    G  DRL SLM  LA  LH+D++   G V A  GD GV+Y++K V +    +  RCLVVADDVW+A V+  LRETGMWVL TTR   + E    E V +D L    A  VLRGA+ELP G  L D++++++E+CG +AM+ AFVG W++VR      +   AW R    +  ++  ++    + +  E   +   R++VLRAGF+Y+G  +   Q LY+ LAV P+G LF   DA VL+       E+E+  +  + ILERW ++R         KY THDAH +FAR+ L DR D+R PAV+RW EHIS L+    ++ + L  +WR ++ VGGKG    RPYD  L  M  S+        G + V+     G R   E  E  +      RR L +E+ TLG +   VA TL+ L       G   EA+
Sbjct:   32 EIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARLQ--------------------------PGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVM--KGAVDAPTGDDGVSYVRKIVSQ----EKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPE--ERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLL-------ENEEVAKGPISILERWGVLRTD----ASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPATSYATSGAVGVVMNLYRGARKLGELAEIMKRVEPLFRRALEIEEATLGPDDIQVAVTLQELGLCMRETGRPGEAE 658          
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 5.570e-101
Identity = 261/779 (33.50%), Postives = 399/779 (51.22%), Query Frame = 2
Query:   26 MANGLEAVSHAANLA-LRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIRDKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRC-PSVLDVSPLIECVRQVDQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEGKVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPARQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGET-------------------LEF----FSDGIVWLTVNNG--AKDRLSSLMWQLATMLHDDILGSTGPVPAGFGDGGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRNELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVE-LCGHLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREVQSQRRISVLRAGFRYLGAVNDHV-QWLYLALAVMPDGHLFSLRDATVLV---YGQEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESLKDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVSRPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQQTLGT-EHGH----VANTLRLLA--DLAERI---GHSDEAKEWRRQQTEALDAAICAKDRSLGAEDMDLSNLH-SLATTMMESGRQDEAEQLFRQAV 2233
            MA   +AV  A   A L +S     VA  + +IG   P V  +  A+   +  V+ A+ NK +L  L +RC  +   VI K +    S +DVSPL  CV ++D+V +    +G L R+ + + D D+I  L  R+  +   +GLAGVV +  ++++++++L R                     +  +  PK A VP G PA ++W+  R+ V+  V + L  G  P +  L G+SG+GK+TAA ++VR+ +                    LE     FSDG+V+L V  G  A DRL  LM +LA  LH+D+L  T   P   G+ G +Y+KK + +       RCLVVADDVW+  V+  L+ETGMWVL TTR   ++E  +G  V +D+L+   A  VLRGA+ELP G  L D A+++++ +CG +AM+IAFVG WS VR  +D  AW+ A + I   +  ++ +A   +  +V   +R+ +LRAGF YLG     + Q LY+A+AV PDG+ F + DA VL+   +  + +P   +     ++ILERW+++          KY  HD H++FAR+ ++D+GD+R+P V RW   IS L+     D Y L+ +WR V+ VGG G    RPYD  L SM     +  +   L V+            Y+  ++L  ME  T    EH        + +R++A   L   +   G   E  E  RQ  E  DA++       GA    LS+++ +       +G   E E   R+A+
Sbjct:   79 MATRGDAVQSAQETARLGISTVVESVATGIIEIGAATPVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQILAR---------------------LQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILS-GDEPAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEA-GEKGESYVKKMMTRTK----KRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEG--VDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVREDADGMNDSQV---KRLGILRAGFDYLGEEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASG----KYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSMGS---DCSKSHALDVVA---------ELYEQEQKLAEMETLTREVLEHADDDAGADSCVRMVALWYLGRSLSIQGRLQEQGEASRQLGELFDASVKPSALDGGAAQAQLSSIYKAYGVCATAAGEWTEGESWLRKAL 809          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2411.6528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRK8_9PHAE2.550e-19645.60NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZW8_ECTSI1.950e-19044.39NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KLK9_9PHAE8.640e-18944.40NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZY7_ECTSI1.920e-17145.33NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KYW3_9PHAE1.240e-15547.44NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KJ30_9PHAE1.560e-13437.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J759_9PHAE2.430e-13041.24NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LFN6_ECTSI1.880e-12736.48NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5JSI2_9PHAE1.910e-10437.35NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KE50_9PHAE5.570e-10133.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2411contigH-paniculata_contig2411:10099..20401 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score628.6
Seed ortholog evalue4.4e-177
Seed eggNOG ortholog2880.D7FZX2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons2
Model size2798
Cds size2685
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2411.6528.1prot_H-paniculata_contig2411.6528.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2411 10187..20376 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929694.049199-UTR-H-paniculata_contig2411:10098..101861622929694.049199-UTR-H-paniculata_contig2411:10098..10186Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2411 10099..10186 -
1691480970.0218155-UTR-H-paniculata_contig2411:10098..101861691480970.0218155-UTR-H-paniculata_contig2411:10098..10186Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2411 10099..10186 -
1622929694.0978563-UTR-H-paniculata_contig2411:20376..204011622929694.0978563-UTR-H-paniculata_contig2411:20376..20401Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2411 20377..20401 -
1691480970.0526667-UTR-H-paniculata_contig2411:20376..204011691480970.0526667-UTR-H-paniculata_contig2411:20376..20401Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2411 20377..20401 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929694.067242-CDS-H-paniculata_contig2411:10186..123401622929694.067242-CDS-H-paniculata_contig2411:10186..12340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2411 10187..12340 -
1691480970.0320306-CDS-H-paniculata_contig2411:10186..123401691480970.0320306-CDS-H-paniculata_contig2411:10186..12340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2411 10187..12340 -
1622929694.0826297-CDS-H-paniculata_contig2411:19845..203761622929694.0826297-CDS-H-paniculata_contig2411:19845..20376Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2411 19846..20376 -
1691480970.041826-CDS-H-paniculata_contig2411:19845..203761691480970.041826-CDS-H-paniculata_contig2411:19845..20376Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2411 19846..20376 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2411.6528.1

>prot_H-paniculata_contig2411.6528.1 ID=prot_H-paniculata_contig2411.6528.1|Name=mRNA_H-paniculata_contig2411.6528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=895bp
MANGLEAVSHAANLALRMSRATADVAVAMADIGEGLPWVGGVLTAVRTIR
DKVEAATSNKNDLDSLHQRCTYMIACVIVKCQRCPSVLDVSPLIECVRQV
DQVVEHCGQRGWLKRVIKSKEDKDEIAELDRRLGNLTTDLGLAGVVAVEG
KVDNLKRLLQRIVDNQERRHAEQMAELTDIKAIMQKTTPKQAQVPKGTPA
RQSWYVRRERVQQIVCEELRRGGSPRIVGLVGESGSGKTTAACELVRSGE
TLEFFSDGIVWLTVNNGAKDRLSSLMWQLATMLHDDILGSTGPVPAGFGD
GGVAYIKKRVEKGNGGKGYRCLVVADDVWDAEVMVALRETGMWVLATTRN
ELLLEDVDGESVGIDKLSKDSALSVLRGASELPTGTPLPDSALELVELCG
HLAMNIAFVGRWSAVRKREDPSAWSRAAASIRTELKTLKINATIDSPREV
QSQRRISVLRAGFRYLGAVNDHVQWLYLALAVMPDGHLFSLRDATVLVYG
QEYSPEDEQAVENVLDILERWSIVRAGDGARTHRKYCTHDAHLNFARESL
KDRGDIRRPAVDRWVEHISSLEVLTCMDRYELTRLWRVVKVVGGKGCRVS
RPYDGALSSMDDSDFEVRRKGVLKVMGFREANEDWEGAYDARRRLLGMEQ
QTLGTEHGHVANTLRLLADLAERIGHSDEAKEWRRQQTEALDAAICAKDR
SLGAEDMDLSNLHSLATTMMESGRQDEAEQLFRQAVEVCEAKVGPDDERV
GYALHSLGVCVRRRGRMLEAEKLLERSLSIKRTTVGPESAAVAYTLHNLG
MCMMRLSGREEEAVKHLTKSLHIFEVQLGQDDLKLVGILHKLGMCAKAKG
RYEQAIEFFTRGLRISKAKLEPNDWRILRSRRQLNRCIEQSETR*
back to top

mRNA from alignment at H-paniculata_contig2411:10099..20401-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2411.6528.1 ID=mRNA_H-paniculata_contig2411.6528.1|Name=mRNA_H-paniculata_contig2411.6528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10303bp|location=Sequence derived from alignment at H-paniculata_contig2411:10099..20401- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGTCAGCAAACAGTACGGGGATATGGCCAACGGTCTAGAGGCGGTGT CCCATGCGGCGAACCTAGCGCTGCGAATGAGTAGGGCTACTGCGGACGTG GCAGTCGCTATGGCGGACATAGGCGAGGGGCTTCCGTGGGTCGGTGGGGT GCTCACGGCGGTAAGAACGATCCGTGATAAAGTTGAAGCAGCCACTAGCA ACAAAAACGACCTCGACTCTCTGCATCAGCGGTGCACGTACATGATCGCC TGTGTGATCGTCAAATGCCAGCGGTGTCCATCGGTGCTAGACGTTAGCCC GCTCATCGAATGTGTGAGGCAAGTGGATCAAGTCGTGGAGCACTGCGGTC AGCGAGGGTGGTTGAAGAGAGTTATCAAGTCTAAAGAAGACAAGGACGAG ATTGCAGAGCTAGACCGTCGTCTCGGAAATCTAACCACCGACTTGGGCCT TGCTGGAGTCGTCGCGGTGGAGGGGAAGGTGGACAATTTGAAGAGGCTGC TGCAGCGAATTGTCGACAATCAGGAGAGGCGCCACGCAGAGCAAATGGCT GAACTGGTGAGCCGTCACGATAGAGTCTTTGCATTGCACTTGATACTGGC GATGTGTAACATAGGCTAAGTCTGTTCCAAGGCTCATTAGAGTTATAGAT TATCGTCGTTATAGCTATGCGCATCGCAGACGGTCATATGGTCTTCGTAC CGCATATATCCAAAGGATCGTCTATGCTGCCTGTGTGCAAGAAGCACGAG CGCATTGACAAAGTGATACTGAGCAGGGTTTAATGTTTTACCTATCCTGT TGTGCGTAATCTTTCCTCTAGATTATCCCTTTGCTCATTTTCTTGTTTAG CCTATGCGGCTCTCCAGCCTTTACAAATGATATGTTTTGTTTTATGCATG TTCGTCGCTCGTGTCGCACCAGCGAAATAAGCCTCACCTGTTTGCATACT CTTACGCTCCACGGTGATCGAAAATGGCGTCTACAATTTTCGAAGGTCAA TGATATCGGTACGTGTGTGATTTTTGCATGCTCCCGCTCGGCACAACCGC GAAATAGTTTTGACTTTATACCAACCATGGACTTACAGTCCCGGAGTCGT TGCCTTGGGGACTTCCCTCTTGCACTAGCCTGAACTATGTCACCCAGTAT GCGTTATTAGTTCACCTAAACTCCACACGGAAGTGTCAAGCACTCTCCAG GAACTCAATCATCGGAAAACAACCAAACACACTATGTAGAAAACCCACAA CATGGTACGACCAGTGGCCTTCTCTGACCTATTCCAATGTCCCTGGGCTA CAACACCCTCGCAAAAGTCAGCCCTTGTTGCCAACGTAAAGCTGTTGAGC AAACACGACTGCTTTGATAAAAACAGCGGTCGAGTGGCACTCTCGAAGAT TCCACCCGTAGAAACGCACTACAAACTCAAACACACCACCTACGTCCATT GCCAAAACGCTCCTGCCTCCGTGAATGTAAAGTCAATCATCATGCCGTAA AGTGTCCAATTAATATGCCAGAAAAGTTGTTCTGCGCGTAAATTCTGGCT CCCTCCATCATACTGATTTGTTTTTCGCTTCTCTGAAGGAGGCGCCCGAA AATTCAACCATGCATGCAGAAAAACAACTTGATCGTCGCGCGTCCCCCAA CAATACGCACGTGCTGCACGAATGTTCTATGCACACCATGAAAACCAGTG TACAACGGTAGGTACGCCGATTCCCCCAAACCGCGATCCAGTCATCTATC AAAATGTCCGACCACCTCTATTAGCTGCCGGCGCCTAGTGAAACTTGAAA CAATTCAGCCGATGTGGCGAAATGCACAAATTTATGGGGCATTGCGCAAC ATACTTCCAAATTTTTTTATATATATCGCCTAACCTAACAAATATGTTAC ACTGTTGTCCCTTATAAATCATTCAAACATAATCTTCGCCCTGTATGTCA ATGTTTCAGGCGTAACCACGTATCTTCTCAGCATCATCCGTCAGACATAA AACAATCGTCAGGCGAGACTCTTCAAATTCATAGAAACATAAATCGAACC CAGCCTATGCTGCTCAAAAATCTTCACAGATTCAATCCATACCGTGCCTT CAAATCTCTCTTCAGCGACTGCTTTAGTTACTGTCCCTTCAGCTGGGCAG GCAACATCGCCGATGCATCCGCCAAGACTCTTGACATAAACTCCCACGTG CTCTCCTCATCGTCCAGCCCTTGCCAATACACCCGGATCACGTACTCATC ACCACGCTCCGTCTTCTTCACCTCTCCGTTTCTCTCAATATGGTATTTCG CTTGGTGCTCGAGGTATTGGATCACCTTGGTCGTCCGACTGGTCACTTTC AATTGCTTATCCGCGTAAAAACGCATGTGCATCACGTGGGCGTGATGCGT CTCGCCCGTGACAAGGTGTTGTATCTTGTCCACGTGCTCGCGGTCATCCG ATAACACCCCCCATGGGCCAGTCAACCTGCCCATTAGCTTAGCGTGGGGC CCGGTTTTGCGCACGCGCGCCACCAACACGAAACCACTCACCAAAAACTG CGGTATCTCCCCGCGATTCGTGCGCTTGCAACTCTTCGCCCGTCCGGCTT CCCTGCCGCACAAAACGCTGCGGCGGCTTTCCTCTTCCACCTTCACGATC CGCGCTGTCTCATGCTCTACCTGTGCGGGGGTCAGCGGCTCCACCAGCCA TCCCTCGTTGGCTTCGTCCACCAAAGCCGCGAAGCCTGTCCACGGCTCAC GGTCCATCATCACCTTGAACGGCGTAGTGCCGATACTCGGTCTCCACGCC ATGTTGAGTGCCGTTGCATCGCCGGCACCACCGTGATCCATGTCTCCAAC GGCTTGCCCCGCAGCCAACGTCGCTGGCAGCGCCCGAAGCCCCTCGCTCA TCTTCTGCTCGACCGTGCCATTCGTCAACGCTGAGTCCGCGACCAAGAAA TGATGGCGATTTCTCAGCCGCGGCTGCTTTCCACAGCACGCGGTTCTTGA AATGCGCCGCATTGTCGCTGACCCACGTTCGTGGCGCACCAAAAACTGCG CACCACTTCACCAGCTATTCTGCCGTAAATTTCGCGATACACGCTTTTGC CGGCCGAACCTGCTGAGTTGAGTCCTCAGTTACCAGGACGTACTTGTATC CATTTAGCATATCCACCGCTGATGCAACTTCGCTCTCTCCGATATGCAAG AAATCGAAGTGCATCGCTTTTCTTGCCTCCTCGCCAAACATCGTTCCTGC CAACGGGCGTGGCACTGTTGCCCCTGTCTTGTAATCCGCACAGTAGAGAC ACTGGCGGACGAAGTCCTTAGCGTCCTCCATTGTGGTCCACACGCAGTAC CGCCGCAGCCGGTCCAGTGTAGCCTCTATGCCTCTATGGCACACCTCTCC CATGTGTGCACATACCAGCAGCCATACGTCAGCTGACATGCGATTGGAGC ATCCACAGGACCCGCTCCCCGCAATGCTGCACCCAATAGGCTCCCTCATC ATCACGTGTTGCGGTCCCCAACACGGCGGCCACCTTGGTGAGCTCCTCCT TGGCCTTCGCCTGGCTCGCGACCAATTCGCCTTTTCGTCGGCATCGCGCC CAATTCGATCTCATCTTGCATGGGTAGCATGTACACCCGCATCACCAGCG CCACCCTCAGCTCCTGGACCCACCTTGAAAACAAATGTTACCAACTATTC TGTTCGCTGAGGATGTGCACGATGTTGTACTAAGATTGTCCGAGAAACGC GCTCCACCGCTGCAGCCGTGGCCATGGCTCTAGACGCAATCGGCACCGTG CACGTCTCCGGATGACAGATATAGGTCAGATTCCAATGGTCGCAGAATAT ATGCGCACCGTCCCAGAACATGTACGGCACTCTCAGGAACGTTGACACGA TGGCATACGCTTCCTTGTCTACCGTTGGTCATCTCCGCTGGGCTCCCTTG AACGCTCCACTCAAAAACGCCAGCCACCCGTGGCTCATTTCGACTTTTCG CCGCCTGCACTCAGCTCCTCCGGTGGCACCTGCCTGAGGTAGCTTGCCCA AAATCTATTGCTTGCGTCAGGAAAGATAAGCACGCTACGGTCCGCCTGCG GATGATACAGCGGCACCGCCTCCGAGATGCGCTCGGTCGCCCCGCCCACA CCGCCGCGCGTTCCTCCGTCCAGTTTCCTGTTATTGTTACATTATCCGCT TCACGCCGCATTCGGCGCGTGGTCAAAAGTATCTTCTGCATCTCACGCAG GGGCTCCACCATCGCAGCCAGCTCTGGCACCGACGCTCTCATCCGCCTGG AGGAACTGCACGAGCTCTCCAGCCATGTTAGGTCGGCGCATGGAAGCCAA GCCCTGTACTCGCTCCGGATCATGGGAGACCGTCGCCCTCGAGTAAACCT TTCCGCACCAGCGCATCTCCCGCCAGAACAGCTTCACCTCGTGAGCAGCG GCGTGCATACTGCGTTTCTATAGCTGCTCCAACACTGCCCCCTGTCTCTG CATCAGTTCTTGCCACATACCGGCCCATATTGCTGTATCATCAACCCACA CTTCGCAGATTTTCCCCAGCAGGTCTTCCAGAACGTTTCCCATCGTCCCC TGGAAATAACTAATATAGTCGCATTTAGCACTCCCTGGGGAACCCTGGCA GGCGTGTGTAGCTCCTTGACCGTGACCATCGGGAAGATATCTTGCGCTTG AGGATCGAGCGGCACCTGTCTGTATCCCTGCAGCAGATCCAGCGTGCAGA ACACGCTAGTTCCTGCCATGCCTCGCCCGATCTCCTCCATTGGCATTGTT GAGGGCGTGACGAGGATGTCCACTGCACGGCAGTCGGCCACCGTTCGATA GGTGTCCTTGAGTATTACCATTGCCACGCTGCCGAGCCTTGCTTGGGGAT TTGTGAACACCTCGCCTGCCTGTGCCAACTTCGCGAAATTATCATCCACC CAATTGACCTCGTCGCGATACATCGGGCGCGGCTGCGCCCGGGCAGCTCG CGCGTCAGTGGGTAGATGCACCCACAGCGGTTCTACGTCCGCCGGCGGGC CCCGCTCAGCACCCGCCACAATGCCTGGAAGTGGGAGTTCATGACCAGTT CTTTTGGCTTCCTGACTCCGTTCGGCGGCAAACCCTCGGTCCTCGCCTCT TCTATCGCCGACTCCAAGGCCGCGGCCCTATCTCGGGTCTCCTCGTCCGC TGTCATAAACATGTCAGGTCCTGTCCGCACCATCGCCGTCGTTACCTCAT CCTCAGTATCCCCGCCATTGACCCCGCCACCTGTGGCTCGCAGCAGAGTT TCCATATTTCCTTCGACACTCGGACTGCGCACTAGACTTTCCCCCGTCAC ATCTCCTCGCTTCTGCGTTGGCCTACCCGCCACCATGTTGCCGCCCTGTA GCCGCTCCACGGTTGCTTTTAGCTGTCGAATCACGTCGATATCCATTTTA TTCTGCAGCGTTAGTCCGCCGAGAATGACCACCCCCGATTTTCCTGGTAC TATCATGAACGGCAGCGTGACCCGCGCGTCGCCTCAGCTAGAGGCGAGGA TGATATGGAGCGGAATCGCCTGCCCCGTCAGGTCCAACTCGCGTCCATCA GCCACTTCTGCCTTCAACACGCCGGTATACGGCTTCGAGAGTTCCCTCCC CGGCCACTGCTGCTGTAGCCGGTGAAGAACGTCTTTAGACGAAGCCATCA CACCAGCCTCTGAGTCCAGCAGTATCTCAGTGCTCACCGCCCTGACATCC GCTCCTGGTAACTTCAGACGCCCTCGGAGATGGTGGCCCAGGTGTTCTAC GTGTAACGTACAATCTTCGCCCACAAATGTTCCTTACCTCAGCCCCTTCA CTCGCGACTACTGGCAGCTGTGCGTAGCGAGTGGAAATACTAGTGCTGTA GGGGGCGCTAAGCTCCGGCGGCGTCTTCACAGGCGCCGAGTGCAGTTGTG GGGGTGGCATACTCGGCCCCGCCTGCTGCGAGACCATTGTTTCTCTAACT GCCTCGGTTCTGCCCAGTCCGCCGTCGATAAACAACCGTTTAGGCACCTG GGCCGTGATAAATTCCTCCTGCTCGCCAGCCGTGAAACAGCTTTCGTGGC TGTCGCTCCCCCCTAGCCACCGCCCAGTGCCTCACCCGGGCTTCTTGTGC GCTGTGCCACCATCGTCCCCTTGTCAAGGGCAAGCCCATTCGATTTCTGA CCACCCAGTCTCTGGCGCGATGAGGTGGAGGCCTGGTTGGACGTGCCTGC CGTCCGTTCCTGGTTGGCGGTCTGGCCGCCGCCACCACTCCTGCACTCCG TTTGTTTATGCTATACCTTGTCACATATGAAACACTTGCCCGGGAAGCCC TTGCTTGGTCACCTTCTGCGTAGCGCGGCCTCCCTCTTTGGCCTTCTGCG TAACTGGGGCAGTATGTCCTCTGCCAGTTGCCGCCTTCTGTCGTGCGGCG CGTCGTTCCGCGATGACTTGCTCTTTCCCCAGCCTCTCCATGGTCTCGAA GATGGCGTGGGGGTTACTTGAAATAGCGTGCATTCTCGCCATCTGTATGG TGTCTTCTTTTTACTCCGGCGGCCAAAGACCCGTCAGGAGCGCACCCACT ACTATCTCCCCCGGGCCAACTGCCCAGTTTCCATTCGGCATCACCACATC CATCAGGTCGTTCTTGTCTGGGTATTGTCAATTTTTTCCCTCTACGTCGG ACACCTGTCGTCCACCGGTGATTTGCCGTTCAGTCTCAACAGGGAGGGCA TATCCTTGGCGAACACTCGCTCATCGGATGCTTCATCATCGCCAACAATT TTCGCCAGCTCTGCGCGCAATAGACGCTCAGTTAGCCTCGGCTCCCCCTT GCAGATTTTGACATCGATAATCTTTTGTATGTATGGCTACAACCTCTCTC AGAGGAGAAGCCACGTGCCCACCCCCATCGCAATTAGAAATGACCAGCTC CTTCTCATACTCATGATAGTCCTTCCAAAACTTGCGCACCGTTGAAACGT TTTCTGGTTGACTGAGACGTGGCGGCATTCTCCCACCAGCCGACAAACTT ACTCCTCATTCTTCTGGCGCAGCTTGACCCGCCTTGGTGCCGTCTTGCTG TTTAGTCGCCATCTGCTCTCCAAACGCCCTAGCCTCCTTGGCGGGCCCAG TCTTGGCTCCAACAGGCTGTGCTTTCTTCTCGCCTAGGTCTCAGAAGATG CACCCCAGTGTTTTTCTCGAACCTCGACTATCTTCAGTACCGCTGACCCA CGATGTACCTAGATTCGATCAAATGATATCAACCGTGGACTTGTAGTCCC GCAGTCGTTGCCTCGGGGACTTCCCTCTTGCACTGGCCCGAACTATGTTA CCCAGTATACGTTATTAGTTCACCCAAACTCCACACGGAAGTGCCAAACA CTCTCCAGGAGCTCAATCATCGGAAAACAACCAAATACACAATGTAGCAA ACCCACAATATGGTACGACCCTTGACCTTCTCTGGTCTATGTCACTGTCC CTTCCATACAATTTCTAGAGATCCTCACGCAGGCTGGGTTGTGCATCCAT CGGCAATCGCTCGGCAGTTACTCATGTCCTAAATACGCACAGAGCTACGG GAACAATATGTCAGCGCTCCCATTGCCCCAAAGCCTCGCCCATGCCCGAT ACACGCTTGTCACTGACAACGCACACATGCATTGCAGAACTAAAAATGAA AAAAAGGCGAAATACGGAATTCGTCGAACAACACGACCCTAGAACCCGTA ATCCTTATTTTGGCCACCGAAATTACATGGTGGGTCGTGAACAATAACAT TTCCAGACGCTTTTCCTTTTGCTTCCTGCTGCACACATCGTAGGTATGAT AACTCCATTGCCTGCACTGGTCCAGACAACTAGGCGATGGTAAGATCCAC CGGCAAGCTGTGACTGAAAATTGAGAGTCTTGCTTTGAAATATTCCCATG TCGTACAAAGTCGCCAGAAGCGTGAACAGCACCCACCATTCACCTCCATG CGCACAAAGCTTACAGCTAGCTTGCCGTTCTTCGCCGGTCTCTTTCACTT CTCGATCTCAGACAGACATCAAGGCGATAATGCAGAAGACAACGCCCAAG CAAGCACAGGTTCCTAAGGGTACTCCTGCGCGTCAAAGTTGGTACGTTCG GCGCGAGCGTGTGCAACAGATCGTATGCGAGGAGCTTCGCCGCGGTGGTT CGCCGAGGATAGTGGGTCTTGTGGGTGAGAGCGGTTCAGGCAAGACGACC GCGGCCTGCGAGCTTGTTCGGAGCGGCGAGACCCTGGAATTCTTCTCGGA CGGCATAGTATGGTTGACCGTGAACAACGGCGCAAAGGATCGCCTCTCGT CATTGATGTGGCAGCTCGCCACGATGTTGCACGACGATATCTTGGGCAGC ACTGGACCCGTCCCTGCTGGTTTCGGTGACGGGGGAGTCGCCTACATCAA AAAGCGAGTTGAAAAGGGCAACGGGGGGAAGGGGTATAGATGTCTGGTGG TTGCGGATGACGTGTGGGATGCCGAGGTAATGGTAGCGCTGCGGGAGACC GGCATGTGGGTTTTAGCCACGACTCGGAATGAATTGTTGCTGGAGGATGT TGATGGGGAGAGTGTGGGGATTGACAAGCTTTCGAAGGATAGTGCATTGT CGGTACTCAGAGGGGCATCAGAGCTACCCACTGGCACCCCTTTGCCGGAC TCAGCGTTGGAATTAGTCGAGCTTTGCGGGCACCTAGCGATGAACATTGC TTTTGTTGGGAGGTGGAGCGCCGTTCGCAAAAGGGAAGACCCTTCGGCTT GGTCGCGAGCGGCTGCCTCTATCCGCACAGAGTTGAAGACATTGAAAATC AACGCAACCATTGATTCTCCCCGCGAGGTGCAGTCTCAAAGGCGAATATC GGTTCTCCGTGCAGGATTTCGTTATCTAGGGGCGGTGAACGACCATGTTC AGTGGCTGTATCTTGCACTGGCGGTGATGCCGGATGGCCATTTGTTTAGC CTACGTGACGCTACAGTGCTCGTTTACGGCCAAGAATACAGTCCGGAGGA CGAGCAAGCAGTAGAAAACGTATTAGATATTCTGGAGCGATGGTCTATCG TGCGGGCAGGGGATGGAGCACGCACACACCGAAAGTACTGCACGCACGAT GCTCATTTAAACTTTGCCAGGGAGAGTCTGAAGGATCGCGGGGATATTCG CCGGCCTGCGGTGGACAGGTGGGTTGAGCATATCTCTTCGCTAGAGGTGC TAACATGCATGGATCGGTATGAACTGACACGACTATGGCGCGTTGTGAAG GTCGTGGGAGGCAAGGGTTGCCGCGTCAGCCGCCCGTATGACGGGGCGTT ATCGAGCATGGACGACTCTGATTTTGAAGTGCGCAGAAAAGGCGTGCTGA AGGTTATGGGTTTCCGGGAGGCAAACGAGGATTGGGAAGGAGCGTACGAT GCTCGGCGCCGATTGCTGGGAATGGAGCAACAGACCCTGGGAACTGAGCA TGGGCATGTTGCAAACACCCTTCGACTTTTAGCAGACCTCGCAGAACGTA TAGGTCATTCCGACGAGGCAAAAGAATGGCGACGGCAGCAAACGGAGGCC TTGGATGCAGCAATTTGCGCAAAGGATAGGTCGCTTGGGGCGGAGGACAT GGACCTCTCCAATCTCCACTCTTTAGCGACTACAATGATGGAGTCAGGTC GGCAGGATGAGGCGGAGCAACTTTTTCGGCAAGCAGTGGAGGTTTGTGAG GCGAAGGTAGGACCGGATGACGAAAGGGTAGGGTATGCATTGCATTCCTT GGGTGTGTGCGTCCGGCGCAGGGGCAGGATGCTGGAGGCGGAAAAGCTCT TGGAAAGATCATTATCCATTAAGCGTACCACTGTTGGGCCCGAAAGTGCT GCGGTGGCTTATACGCTCCATAACTTAGGCATGTGTATGATGAGATTGTC AGGTCGGGAAGAGGAGGCGGTGAAACACTTGACGAAGTCTCTTCACATAT TCGAGGTGCAGTTGGGTCAGGACGATTTGAAATTGGTCGGAATTTTACAC AAGCTTGGCATGTGTGCTAAAGCGAAGGGACGGTACGAACAGGCAATAGA GTTTTTCACCAGGGGGCTAAGGATATCCAAAGCGAAGTTAGAGCCAAACG ATTGGCGCATACTGCGCTCGCGGCGTCAGCTTAATCGATGTATTGAGCAA TCCGAAACTCGGTAGCTCCCTTGTGTATCTAGCTATAGTAATGTCGCCAA TTCTATAGGTGAGTGCGAGGGCGTGGTACTGGTCGGTGATGTTCAATGGT CAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2411:10099..20401-

>mRNA_H-paniculata_contig2411.6528.1 ID=mRNA_H-paniculata_contig2411.6528.1|Name=mRNA_H-paniculata_contig2411.6528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5370bp|location=Sequence derived from alignment at H-paniculata_contig2411:10099..20401- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCAACGGTCTAGAGGCGGTGTCCCATGCGGCGAACCTAGCGCTGCG
AATGAGTAGGGCTACTGCGGACGTGGCAGTCGCTATGGCGGACATAGGCG
AGGGGCTTCCGTGGGTCGGTGGGGTGCTCACGGCGGTAAGAACGATCCGT
GATAAAGTTGAAGCAGCCACTAGCAACAAAAACGACCTCGACTCTCTGCA
TCAGCGGTGCACGTACATGATCGCCTGTGTGATCGTCAAATGCCAGCGGT
GTCCATCGGTGCTAGACGTTAGCCCGCTCATCGAATGTGTGAGGCAAGTG
GATCAAGTCGTGGAGCACTGCGGTCAGCGAGGGTGGTTGAAGAGAGTTAT
CAAGTCTAAAGAAGACAAGGACGAGATTGCAGAGCTAGACCGTCGTCTCG
GAAATCTAACCACCGACTTGGGCCTTGCTGGAGTCGTCGCGGTGGAGGGG
AAGGTGGACAATTTGAAGAGGCTGCTGCAGCGAATTGTCGACAATCAGGA
GAGGCGCCACGCAGAGCAAATGGCTGAACTGATGGCCAACGGTCTAGAGG
CGGTGTCCCATGCGGCGAACCTAGCGCTGCGAATGAGTAGGGCTACTGCG
GACGTGGCAGTCGCTATGGCGGACATAGGCGAGGGGCTTCCGTGGGTCGG
TGGGGTGCTCACGGCGGTAAGAACGATCCGTGATAAAGTTGAAGCAGCCA
CTAGCAACAAAAACGACCTCGACTCTCTGCATCAGCGGTGCACGTACATG
ATCGCCTGTGTGATCGTCAAATGCCAGCGGTGTCCATCGGTGCTAGACGT
TAGCCCGCTCATCGAATGTGTGAGGCAAGTGGATCAAGTCGTGGAGCACT
GCGGTCAGCGAGGGTGGTTGAAGAGAGTTATCAAGTCTAAAGAAGACAAG
GACGAGATTGCAGAGCTAGACCGTCGTCTCGGAAATCTAACCACCGACTT
GGGCCTTGCTGGAGTCGTCGCGGTGGAGGGGAAGGTGGACAATTTGAAGA
GGCTGCTGCAGCGAATTGTCGACAATCAGGAGAGGCGCCACGCAGAGCAA
ATGGCTGAACTGACAGACATCAAGGCGATAATGCAGAAGACAACGCCCAA
GCAAGCACAGGTTCCTAAGGGTACTCCTGCGCGTCAAAGTTGGTACGTTC
GGCGCGAGCGTGTGCAACAGATCGTATGCGAGGAGCTTCGCCGCGGTGGT
TCGCCGAGGATAGTGGGTCTTGTGGGTGAGAGCGGTTCAGGCAAGACGAC
CGCGGCCTGCGAGCTTGTTCGGAGCGGCGAGACCCTGGAATTCTTCTCGG
ACGGCATAGTATGGTTGACCGTGAACAACGGCGCAAAGGATCGCCTCTCG
TCATTGATGTGGCAGCTCGCCACGATGTTGCACGACGATATCTTGGGCAG
CACTGGACCCGTCCCTGCTGGTTTCGGTGACGGGGGAGTCGCCTACATCA
AAAAGCGAGTTGAAAAGGGCAACGGGGGGAAGGGGTATAGATGTCTGGTG
GTTGCGGATGACGTGTGGGATGCCGAGGTAATGGTAGCGCTGCGGGAGAC
CGGCATGTGGGTTTTAGCCACGACTCGGAATGAATTGTTGCTGGAGGATG
TTGATGGGGAGAGTGTGGGGATTGACAAGCTTTCGAAGGATAGTGCATTG
TCGGTACTCAGAGGGGCATCAGAGCTACCCACTGGCACCCCTTTGCCGGA
CTCAGCGTTGGAATTAGTCGAGCTTTGCGGGCACCTAGCGATGAACATTG
CTTTTGTTGGGAGGTGGAGCGCCGTTCGCAAAAGGGAAGACCCTTCGGCT
TGGTCGCGAGCGGCTGCCTCTATCCGCACAGAGTTGAAGACATTGAAAAT
CAACGCAACCATTGATTCTCCCCGCGAGGTGCAGTCTCAAAGGCGAATAT
CGGTTCTCCGTGCAGGATTTCGTTATCTAGGGGCGGTGAACGACCATGTT
CAGTGGCTGTATCTTGCACTGGCGGTGATGCCGGATGGCCATTTGTTTAG
CCTACGTGACGCTACAGTGCTCGTTTACGGCCAAGAATACAGTCCGGAGG
ACGAGCAAGCAGTAGAAAACGTATTAGATATTCTGGAGCGATGGTCTATC
GTGCGGGCAGGGGATGGAGCACGCACACACCGAAAGTACTGCACGCACGA
TGCTCATTTAAACTTTGCCAGGGAGAGTCTGAAGGATCGCGGGGATATTC
GCCGGCCTGCGGTGGACAGGTGGGTTGAGCATATCTCTTCGCTAGAGGTG
CTAACATGCATGGATCGGTATGAACTGACACGACTATGGCGCGTTGTGAA
GGTCGTGGGAGGCAAGGGTTGCCGCGTCAGCCGCCCGTATGACGGGGCGT
TATCGAGCATGGACGACTCTGATTTTGAAGTGCGCAGAAAAGGCGTGCTG
AAGGTTATGGGTTTCCGGGAGGCAAACGAGGATTGGGAAGGAGCGTACGA
TGCTCGGCGCCGATTGCTGGGAATGGAGCAACAGACCCTGGGAACTGAGC
ATGGGCATGTTGCAAACACCCTTCGACTTTTAGCAGACCTCGCAGAACGT
ATAGGTCATTCCGACGAGGCAAAAGAATGGCGACGGCAGCAAACGGAGGC
CTTGGATGCAGCAATTTGCGCAAAGGATAGGTCGCTTGGGGCGGAGGACA
TGGACCTCTCCAATCTCCACTCTTTAGCGACTACAATGATGGAGTCAGGT
CGGCAGGATGAGGCGGAGCAACTTTTTCGGCAAGCAGTGGAGGTTTGTGA
GGCGAAGGTAGGACCGGATGACGAAAGGGTAGGGTATGCATTGCATTCCT
TGGGTGTGTGCGTCCGGCGCAGGGGCAGGATGCTGGAGGCGGAAAAGCTC
TTGGAAAGATCATTATCCATTAAGCGTACCACTGTTGGGCCCGAAAGTGC
TGCGGTGGCTTATACGCTCCATAACTTAGGCATGTGTATGATGAGATTGT
CAGGTCGGGAAGAGGAGGCGGTGAAACACTTGACGAAGTCTCTTCACATA
TTCGAGGTGCAGTTGGGTCAGGACGATTTGAAATTGGTCGGAATTTTACA
CAAGCTTGGCATGTGTGCTAAAGCGAAGGGACGGTACGAACAGGCAATAG
AGTTTTTCACCAGGGGGCTAAGGATATCCAAAGCGAAGTTAGAGCCAAAC
GATTGGCGCATACTGCGCTCGCGGCGTCAGCTTAATCGATGTATTGAGCA
ATCCGAAACTCGGTAGACAGACATCAAGGCGATAATGCAGAAGACAACGC
CCAAGCAAGCACAGGTTCCTAAGGGTACTCCTGCGCGTCAAAGTTGGTAC
GTTCGGCGCGAGCGTGTGCAACAGATCGTATGCGAGGAGCTTCGCCGCGG
TGGTTCGCCGAGGATAGTGGGTCTTGTGGGTGAGAGCGGTTCAGGCAAGA
CGACCGCGGCCTGCGAGCTTGTTCGGAGCGGCGAGACCCTGGAATTCTTC
TCGGACGGCATAGTATGGTTGACCGTGAACAACGGCGCAAAGGATCGCCT
CTCGTCATTGATGTGGCAGCTCGCCACGATGTTGCACGACGATATCTTGG
GCAGCACTGGACCCGTCCCTGCTGGTTTCGGTGACGGGGGAGTCGCCTAC
ATCAAAAAGCGAGTTGAAAAGGGCAACGGGGGGAAGGGGTATAGATGTCT
GGTGGTTGCGGATGACGTGTGGGATGCCGAGGTAATGGTAGCGCTGCGGG
AGACCGGCATGTGGGTTTTAGCCACGACTCGGAATGAATTGTTGCTGGAG
GATGTTGATGGGGAGAGTGTGGGGATTGACAAGCTTTCGAAGGATAGTGC
ATTGTCGGTACTCAGAGGGGCATCAGAGCTACCCACTGGCACCCCTTTGC
CGGACTCAGCGTTGGAATTAGTCGAGCTTTGCGGGCACCTAGCGATGAAC
ATTGCTTTTGTTGGGAGGTGGAGCGCCGTTCGCAAAAGGGAAGACCCTTC
GGCTTGGTCGCGAGCGGCTGCCTCTATCCGCACAGAGTTGAAGACATTGA
AAATCAACGCAACCATTGATTCTCCCCGCGAGGTGCAGTCTCAAAGGCGA
ATATCGGTTCTCCGTGCAGGATTTCGTTATCTAGGGGCGGTGAACGACCA
TGTTCAGTGGCTGTATCTTGCACTGGCGGTGATGCCGGATGGCCATTTGT
TTAGCCTACGTGACGCTACAGTGCTCGTTTACGGCCAAGAATACAGTCCG
GAGGACGAGCAAGCAGTAGAAAACGTATTAGATATTCTGGAGCGATGGTC
TATCGTGCGGGCAGGGGATGGAGCACGCACACACCGAAAGTACTGCACGC
ACGATGCTCATTTAAACTTTGCCAGGGAGAGTCTGAAGGATCGCGGGGAT
ATTCGCCGGCCTGCGGTGGACAGGTGGGTTGAGCATATCTCTTCGCTAGA
GGTGCTAACATGCATGGATCGGTATGAACTGACACGACTATGGCGCGTTG
TGAAGGTCGTGGGAGGCAAGGGTTGCCGCGTCAGCCGCCCGTATGACGGG
GCGTTATCGAGCATGGACGACTCTGATTTTGAAGTGCGCAGAAAAGGCGT
GCTGAAGGTTATGGGTTTCCGGGAGGCAAACGAGGATTGGGAAGGAGCGT
ACGATGCTCGGCGCCGATTGCTGGGAATGGAGCAACAGACCCTGGGAACT
GAGCATGGGCATGTTGCAAACACCCTTCGACTTTTAGCAGACCTCGCAGA
ACGTATAGGTCATTCCGACGAGGCAAAAGAATGGCGACGGCAGCAAACGG
AGGCCTTGGATGCAGCAATTTGCGCAAAGGATAGGTCGCTTGGGGCGGAG
GACATGGACCTCTCCAATCTCCACTCTTTAGCGACTACAATGATGGAGTC
AGGTCGGCAGGATGAGGCGGAGCAACTTTTTCGGCAAGCAGTGGAGGTTT
GTGAGGCGAAGGTAGGACCGGATGACGAAAGGGTAGGGTATGCATTGCAT
TCCTTGGGTGTGTGCGTCCGGCGCAGGGGCAGGATGCTGGAGGCGGAAAA
GCTCTTGGAAAGATCATTATCCATTAAGCGTACCACTGTTGGGCCCGAAA
GTGCTGCGGTGGCTTATACGCTCCATAACTTAGGCATGTGTATGATGAGA
TTGTCAGGTCGGGAAGAGGAGGCGGTGAAACACTTGACGAAGTCTCTTCA
CATATTCGAGGTGCAGTTGGGTCAGGACGATTTGAAATTGGTCGGAATTT
TACACAAGCTTGGCATGTGTGCTAAAGCGAAGGGACGGTACGAACAGGCA
ATAGAGTTTTTCACCAGGGGGCTAAGGATATCCAAAGCGAAGTTAGAGCC
AAACGATTGGCGCATACTGCGCTCGCGGCGTCAGCTTAATCGATGTATTG
AGCAATCCGAAACTCGGTAG
back to top