mRNA_H-paniculata_contig24011.6499.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY) HSP 1 Score: 55.1 bits (131), Expect = 1.750e-7 Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 19 PLELVHTDIARPVDKP-FGGCRFAIIFVDDYSRMCELYTLRQKLE 150
PLE+VHTDIA P D P GG R+ + F+DD+SR C +Y L++K E
Sbjct: 1310 PLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSE 1354
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A6A3BY51_HIBSY (Histone acetyltransferase n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BY51_HIBSY) HSP 1 Score: 55.1 bits (131), Expect = 1.750e-7 Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 19 PLELVHTDIARPVDKP-FGGCRFAIIFVDDYSRMCELYTLRQKLE 150
PLE+VHTDIA P D P GG R+ + F+DD+SR C +Y L++K E
Sbjct: 388 PLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSE 432
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A8J6HPP1_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HPP1_TENMO) HSP 1 Score: 53.5 bits (127), Expect = 6.100e-7 Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 10 TTEPLELVHTDIARPVD-KPFGGCRFAIIFVDDYSRMCELYTLRQKLE 150
TTEPLELVHTD+ P+ G R+ + F+DD SR CE+Y +++K E
Sbjct: 390 TTEPLELVHTDVCGPMRVNSLAGLRYFVTFIDDKSRWCEVYFMKKKSE 437
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A8H8JVA7_9AGAM (Pol polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JVA7_9AGAM) HSP 1 Score: 53.5 bits (127), Expect = 6.110e-7 Identity = 21/45 (46.67%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 10 TTEPLELVHTDIARPVDKPFGGCRFAIIFVDDYSRMCELYTLRQK 144
T++PLEL+H+D+ P+D GG R+ ++FVDDY+RM + L+ K
Sbjct: 139 TSQPLELLHSDVCGPLDASIGGVRYVLLFVDDYTRMAWVCLLKTK 183
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A1J3K4I8_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K4I8_NOCCA) HSP 1 Score: 53.5 bits (127), Expect = 6.120e-7 Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 10 TTEPLELVHTDIARPVDKP-FGGCRFAIIFVDDYSRMCELYTLRQK 144
+T+ LE++HTDI P D P FGG ++ I F+DD+SR C LY L +K
Sbjct: 481 STQLLEIIHTDICGPFDVPTFGGEKYFITFIDDFSRYCYLYLLHEK 526
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A4Y1REW6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1REW6_PRUDU) HSP 1 Score: 52.8 bits (125), Expect = 1.140e-6 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 19 PLELVHTDIARPV-DKPFGGCRFAIIFVDDYSRMCELYTLRQK 144
PLEL+HTD+ P+ ++ GG ++ I F+DDYSRMC +Y LR K
Sbjct: 432 PLELIHTDVCGPMQNESIGGNKYFITFIDDYSRMCWVYFLRNK 474
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A4Y1R3A1_PRUDU (BURP domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R3A1_PRUDU) HSP 1 Score: 52.8 bits (125), Expect = 1.140e-6 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 19 PLELVHTDIARPV-DKPFGGCRFAIIFVDDYSRMCELYTLRQK 144
PLEL+HTD+ P+ ++ GG ++ I F+DDYSRMC +Y LR K
Sbjct: 124 PLELIHTDVCGPMQNESIGGNKYFITFIDDYSRMCWVYFLRNK 166
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A0V1D8H9_TRIBR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella britovi TaxID=45882 RepID=A0A0V1D8H9_TRIBR) HSP 1 Score: 52.4 bits (124), Expect = 1.560e-6 Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 19 PLELVHTDIARPV-DKPFGGCRFAIIFVDDYSRMCELYTLRQKLE 150
PLEL+HTDI P+ GG ++ + F+DDYSR CE+Y L+ + E
Sbjct: 35 PLELIHTDICGPMRQNSIGGSKYFVTFIDDYSRWCEIYFLKNRNE 79
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 52.4 bits (124), Expect = 1.570e-6 Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 1
Query: 22 LELVHTDIARPVDKP-FGGCRFAIIFVDDYSRMCELYTLRQKLE 150
LE+VHTDIA P D P GG R+ + F+DD+SR C +Y L++K E
Sbjct: 390 LEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSE 433
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Match: A0A8H8MSC5_9AGAM (Pol polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MSC5_9AGAM) HSP 1 Score: 52.0 bits (123), Expect = 2.140e-6 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 10 TTEPLELVHTDIARPVDKPFGGCRFAIIFVDDYSRMCELYTLRQK 144
T++PLEL+H+D+ P+D GG R+ + FVDDY+RM + L+ K
Sbjct: 613 TSQPLELLHSDVCGPLDASIGGVRYVLSFVDDYTRMAWVCLLKTK 657 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24011.6499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24011.6499.1 >prot_H-paniculata_contig24011.6499.1 ID=prot_H-paniculata_contig24011.6499.1|Name=mRNA_H-paniculata_contig24011.6499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=50bp EELTTEPLELVHTDIARPVDKPFGGCRFAIIFVDDYSRMCELYTLRQKLEback to top mRNA from alignment at H-paniculata_contig24011:3568..3717+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24011.6499.1 ID=mRNA_H-paniculata_contig24011.6499.1|Name=mRNA_H-paniculata_contig24011.6499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=150bp|location=Sequence derived from alignment at H-paniculata_contig24011:3568..3717+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24011:3568..3717+ >mRNA_H-paniculata_contig24011.6499.1 ID=mRNA_H-paniculata_contig24011.6499.1|Name=mRNA_H-paniculata_contig24011.6499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=300bp|location=Sequence derived from alignment at H-paniculata_contig24011:3568..3717+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |