mRNA_H-paniculata_contig2395.6480.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: D8LIS9_ECTSI (Branched chain amino acid aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIS9_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 7.800e-21 Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 4 PIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWY 156
PIV+DA+LLRANPEGVLRE+SEM GIPY QLSW G KPYDGCW Y+WY
Sbjct: 190 PIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWY 240
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: A0A7L7L719_9BACT (Uncharacterized protein n=1 Tax=Adhaeribacter radiodurans TaxID=2745197 RepID=A0A7L7L719_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 8.360e-11 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 4 PIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWYVR 162
P+V+D + LR NPE VL+++ + LG+P+ A L+WP G + DGCW WY +
Sbjct: 127 PLVLDGNELRKNPEHVLQQLCDGLGLPFNQAMLNWPAGPRAEDGCWAPFWYAK 179
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: UPI001BB77480 (Sulfotransferase family protein n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=UPI001BB77480) HSP 1 Score: 62.4 bits (150), Expect = 2.890e-10 Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 4 PIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWY 156
P+V+D+ L NPE +L ++ E LGIPY A L WP G +P DG W WY
Sbjct: 145 PLVIDSRELLVNPEAILEQVCERLGIPYTARMLQWPAGPRPEDGAWAPHWY 195
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: A0A4V3AQX6_9RHOB (HAD family hydrolase n=1 Tax=Antarcticimicrobium luteum TaxID=2547397 RepID=A0A4V3AQX6_9RHOB) HSP 1 Score: 61.2 bits (147), Expect = 7.560e-10 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 4 PIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWY 156
P+VVD+ +RA+PEG+LR++ +G+ + A LSWP G KP DG W WY
Sbjct: 145 PVVVDSADIRADPEGMLRQLCARIGLDWDPAMLSWPAGPKPEDGVWAAHWY 195
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: A0A3C1KSR7_9GAMM (Sulfotransferase family protein n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KSR7_9GAMM) HSP 1 Score: 61.2 bits (147), Expect = 8.610e-10 Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 4 PIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWYV 159
P V+D+ A+PEGVLR + E +GIP+ AA LSWP G++ DG W WY
Sbjct: 154 PPVIDSAATLADPEGVLRALCERVGIPFSAAMLSWPAGSRDSDGVWAPHWYA 205
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: A0A2P6V5B2_9CHLO (Aminotransferase class IV n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V5B2_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 2.600e-9 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 4 PIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWY 156
P+V+ DL+R +PEG+LR + L +P+ A LSWP G+KPYDG W WY
Sbjct: 162 PVVLSDDLVR-DPEGMLRALCAALELPFDPAMLSWPAGSKPYDGVWAPWWY 211
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: UPI001FDEF5C7 (hypothetical protein n=1 Tax=Lewinella persica TaxID=70998 RepID=UPI001FDEF5C7) HSP 1 Score: 58.9 bits (141), Expect = 5.790e-9 Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 10 VVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWYVR 162
VVDA LL NPE VL+++ + LG+ + A LSWP G +P DG W WY
Sbjct: 156 VVDARLLLMNPERVLQQLCDRLGLTFTKAMLSWPAGPRPEDGTWAAHWYTN 206
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: A0A7M3T711_9RHOB (HAD family hydrolase n=2 Tax=Pikeienuella piscinae TaxID=2748098 RepID=A0A7M3T711_9RHOB) HSP 1 Score: 58.5 bits (140), Expect = 7.670e-9 Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 4 PIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWY 156
P V++A+ +RANPEG+LR + L IP+ A LSWP G + DG W WY
Sbjct: 146 PPVIEAEDVRANPEGMLRALCAALDIPFDARMLSWPSGPRASDGVWAAHWY 196
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: A0A3E1EFE4_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EFE4_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 1.390e-8 Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 1
Query: 1 RPIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWY 156
RP V+D+ L NPE VLRE+ E +GIP+ A L W G +P DG W WY
Sbjct: 129 RPEVIDSRDLLLNPEAVLRELCERVGIPFDPAMLQWKAGPRPEDGPWARDWY 180
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Match: A0A5C7FTB1_9BACT (Uncharacterized protein n=2 Tax=Lewinella aurantiaca TaxID=2602767 RepID=A0A5C7FTB1_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 1.760e-8 Identity = 25/49 (51.02%), Postives = 30/49 (61.22%), Query Frame = 1
Query: 10 VVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLWY 156
VVDA LL NPE VL ++ + LGIP+ LSW G +P DG W WY
Sbjct: 131 VVDARLLLLNPESVLSQLCDRLGIPFTPQMLSWEPGARPEDGIWAAHWY 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2395.6480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2395.6480.1 >prot_H-paniculata_contig2395.6480.1 ID=prot_H-paniculata_contig2395.6480.1|Name=mRNA_H-paniculata_contig2395.6480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp RPIVVDADLLRANPEGVLREMSEMLGIPYCAAQLSWPKGTKPYDGCWGYLback to top mRNA from alignment at H-paniculata_contig2395:197..358- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2395.6480.1 ID=mRNA_H-paniculata_contig2395.6480.1|Name=mRNA_H-paniculata_contig2395.6480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=162bp|location=Sequence derived from alignment at H-paniculata_contig2395:197..358- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2395:197..358- >mRNA_H-paniculata_contig2395.6480.1 ID=mRNA_H-paniculata_contig2395.6480.1|Name=mRNA_H-paniculata_contig2395.6480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=324bp|location=Sequence derived from alignment at H-paniculata_contig2395:197..358- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |