prot_H-paniculata_contig23833.6442.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A7D9L0S1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L0S1_PARCT) HSP 1 Score: 92.4 bits (228), Expect = 2.090e-20 Identity = 50/145 (34.48%), Postives = 85/145 (58.62%), Query Frame = 0
Query: 1 MSTLRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPF-VRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGR-RENVDEFKHNISQRCRMRDFGSCA 143
M+++R + LA + + + M+V AYLNAP++ EL+++ P F+ +D + V +LRKSLY L Q+ R+WN+ L LV G + +DSC+Y G++ +V ++ DD+ IA + K N+S+R +M+D G +
Sbjct: 71 MTSIRILMQLAMQYNLTIHQMDVKTAYLNAPIDCELYVEQPEGFTMTGKDGEYLVYKLRKSLYGLKQSGRNWNSVLHSHLVSEGFIQSQSDSCVYTKIS--GKSMTIVIIWVDDIIIASNCTVTLTNVKGNLSKRFQMKDMGKLS 213
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A2K3MSU0_TRIPR (Copia-type polyprotein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MSU0_TRIPR) HSP 1 Score: 95.5 bits (236), Expect = 4.830e-20 Identity = 48/141 (34.04%), Postives = 86/141 (60.99%), Query Frame = 0
Query: 1 MSTLRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPFVRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGRREN-VDEFKHNISQRCRMRDFG 140
M T+R V ++A ND+ + M+V +A+LN P+++E+++ PP F +++ V RL+K+LY L Q R+WN + FL+ IG E+ T+ +Y+ + D + +++ +Y DDL I G ++ + EFK ++ + M D G
Sbjct: 923 METIRLVTAIANINDWPMYQMDVKSAFLNGPIDEEVYVAQPPGFKVKNQESK-VYRLKKALYGLKQAPRAWNKRMDKFLIEIGFEKCVTEHGVYVKKSDT-KGIIVMCLYVDDLLITGSNDSYIGEFKSDLKKEFEMTDLG 1061
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A6S7IT23_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IT23_PARCT) HSP 1 Score: 94.4 bits (233), Expect = 1.150e-19 Identity = 52/142 (36.62%), Postives = 85/142 (59.86%), Query Frame = 0
Query: 1 MSTLRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPF-VRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGRRE-NVDEFKHNISQRCRMRDFG 140
++++R + LA + D E+ M+V AYLNAPV+ EL+I+ P F S V +L KSLY L Q+ R+WN+ L FL G+ + +D C+YI + +G +T LL+ + DD+ IA ++ + K ++S + +M+D G
Sbjct: 303 ITSIRMLMQLALDLDMEVHQMDVKTAYLNAPVDCELYIEQPEGFVKHSESGEMLVCKLNKSLYGLKQSGRNWNHMLHTFLTSKGITQLVSDPCVYIKKQNGKKTILLI--WVDDIIIASNSTPSLKQVKDDLSCKFKMKDLG 442
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A7D9JQ57_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JQ57_PARCT) HSP 1 Score: 90.1 bits (222), Expect = 2.020e-19 Identity = 49/142 (34.51%), Postives = 81/142 (57.04%), Query Frame = 0
Query: 1 MSTLRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIP-FVRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGRRENV-DEFKHNISQRCRMRDFG 140
MS++R + A +ND + M+V AYLNAP++ E+FI+ P + ++ V +L KSLY L Q+ R+WNN L D+++ + D C+YI R+ G ++ ++ DDL I+ E + K ++S + RM+D G
Sbjct: 56 MSSIRILLQQAIQNDMLVHQMDVKTAYLNAPIDCEIFIEQPEGYERVGQNGERLVCKLNKSLYGLKQSGRNWNNMLHDYVMKESFTQSLADPCVYI-RNGGTNECTIIIIWVDDLIISASHEILLQSVKDSLSNKFRMKDLG 196
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A7D9M8W6_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M8W6_PARCT) HSP 1 Score: 92.8 bits (229), Expect = 3.650e-19 Identity = 52/142 (36.62%), Postives = 83/142 (58.45%), Query Frame = 0
Query: 1 MSTLRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPF-VRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGRRE-NVDEFKHNISQRCRMRDFG 140
++++R + LA + D E+ M+V AYLNAPV+ EL+I+ P F S V +L KSLY L Q+ R+WN+ L FL G + +D C+YI + +G T LL+ + DD+ IA ++ + K ++S + +M+D G
Sbjct: 136 ITSIRMLMQLALDLDMEVHQMDVKTAYLNAPVDCELYIEQPEGFVKHSESGEMLVCKLNKSLYGLKQSGRNWNHMLHTFLTSKGFTQLVSDPCVYIKKQNGKTTILLI--WVDDIIIASNSTPSLKQVKDDLSCKFKMKDLG 275
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A6S7GJK5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GJK5_PARCT) HSP 1 Score: 92.8 bits (229), Expect = 4.140e-19 Identity = 52/142 (36.62%), Postives = 83/142 (58.45%), Query Frame = 0
Query: 1 MSTLRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPF-VRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGRRE-NVDEFKHNISQRCRMRDFG 140
++++R + LA + D E+ M+V AYLNAPV+ EL+I+ P F S V +L KSLY L Q+ R+WN+ L FL G + +D C+YI + +G T LL+ + DD+ IA ++ + K ++S + +M+D G
Sbjct: 890 ITSIRMLMQLALDLDMEVHQMDVKTAYLNAPVDCELYIEQPEGFVKHSESGEMLVCKLNKSLYGLKQSGRNWNHMLHTFLTSKGFTQLVSDPCVYIKKQNGKTTILLI--WVDDIIIASNSTPSLKQVKDDLSCKFKMKDLG 1029
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A2Z6NYP5_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NYP5_TRISU) HSP 1 Score: 92.8 bits (229), Expect = 4.180e-19 Identity = 52/142 (36.62%), Postives = 82/142 (57.75%), Query Frame = 0
Query: 1 MSTLRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPFVRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLV-AVYADDLAIAGRREN-VDEFKHNISQRCRMRDFG 140
M T+R V ++A ND+ + M+V +A+LN P+E+E+F+ PP + S++ V RL+K+LY L Q R+W + FL IG + T+ Y+ + D E L+V +Y DDL I G +N + EFK ++ + M D G
Sbjct: 763 METIRLVTAIANMNDWPMYQMDVKSAFLNGPIEEEVFVTQPPGYVVKSQENK-VYRLKKALYGLKQAPRAWKRRIDKFLTEIGFVKCVTEHGAYVKKHD--EKGLIVMCLYVDDLLITGSNDNYISEFKSDLKKEFEMTDLG 901
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A0G4GHW4_VITBC (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GHW4_VITBC) HSP 1 Score: 91.3 bits (225), Expect = 6.260e-19 Identity = 47/137 (34.31%), Postives = 80/137 (58.39%), Query Frame = 0
Query: 4 LRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPFVRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGRRENVDEFKHNISQRCRMRDFG 140
+R + ++A + D E+ M+V+ A+LNAP++K +F++ PP + +V RLRK+LY L + R+WN TL + L+ +G R + C+Y+ + G +++ V+ DD+ IA R E V FK +S +D G
Sbjct: 97 VRAILAIANQLDLEIHQMDVNTAFLNAPLDKPVFMECPPGYERPG----YVVRLRKALYGLKEAPRAWNITLHNRLLHLGFRRHPKEPCVYLHDNKG----VMLCVFVDDILIASREEGVTWFKSQLSSVFATKDLG 225
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A0C3DBP3_9AGAM (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3DBP3_9AGAM) HSP 1 Score: 92.0 bits (227), Expect = 7.690e-19 Identity = 49/140 (35.00%), Postives = 81/140 (57.86%), Query Frame = 0
Query: 2 STLRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPFVRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGRR-ENVDEFKHNISQRCRMRDFG 140
+TL T+ S+ A D+EL ++V AYL +++E+++++P ++ + +L K+LY L Q R W L + + + LE+ D CLYI +DG +LLV Y DD+A+AG+ +V EFK NI++ + D G
Sbjct: 639 TTLHTLLSIVAHEDWELHQVDVVGAYLQGDLDEEIYMEVPEGVKEKGKE-GWYWKLTKALYGLKQAGRQWKKKLDEIMGKLSLEKSQADDCLYIHHEDG-IVALLVLAYVDDMAVAGKNLAHVREFKKNIARHVEITDLG 776
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Match: A0A0G4GML6_VITBC (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GML6_VITBC) HSP 1 Score: 90.5 bits (223), Expect = 9.620e-19 Identity = 47/136 (34.56%), Postives = 80/136 (58.82%), Query Frame = 0
Query: 4 LRTVFSLAAENDFELEGMEVDAAYLNAPVEKELFIKLPPEFSPFSRDIPFVRRLRKSLYILNQNRRSWNNTLGDFLVGIGLERFTTDSCLYISRDDGGETSLLVAVYADDLAIAGRRENVDEFKHNISQRCRMRDF 139
+R V ++A + D E+ M+V+ A+LNAP++K +FI+ PP + ++ RLRK+LY L + R+WN TL + L+ +G R + C+Y+ + G ++++V+ DD+ IA R E V FK +S +D
Sbjct: 97 MRAVLAIANQLDVEIHQMDVNTAFLNAPLDKPVFIECPPGYGRPG----YIVRLRKALYGLKEAPRAWNITLHNQLLHLGFRRHPKEPCVYLHDNKG----IMLSVFVDDILIASREEGVTWFKSQLSTVFATKDL 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23833.6442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig23833.6442.1 ID=prot_H-paniculata_contig23833.6442.1|Name=mRNA_H-paniculata_contig23833.6442.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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