prot_H-paniculata_contig2373.6417.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2373.6417.1
Unique Nameprot_H-paniculata_contig2373.6417.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: A0A218YTN0_9HELO (COP9 signalosome complex subunit 2 n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218YTN0_9HELO)

HSP 1 Score: 56.6 bits (135), Expect = 1.250e-7
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MGDESEEEYDFEYSDDNEEET-DVDLENSYYSAKALKTEDPRAAVEAF 47
            M D  +E YDFEY +D+EEET DVD+EN YY+AK LKT DP+AA+E F
Sbjct:    8 MQDSDQEGYDFEYEEDDEEETGDVDVENKYYNAKQLKTTDPQAAIEEF 55          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: A0A0F8AFC1_LARCR (Selenocysteine insertion sequence-binding protein 2-like protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A0F8AFC1_LARCR)

HSP 1 Score: 56.6 bits (135), Expect = 1.290e-7
Identity = 26/51 (50.98%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    6 EEEYDFEYSDDNEEETDVDLENSYYSAKALKTEDPRAAVEAFRENSLPQRL 56
            EE+YD EYS+D+  E +VDLEN YY++KALK +DP+AA+ +F++ + P+ +
Sbjct:   13 EEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKTNFPEMM 63          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: A0A5F8GXP3_MONDO (COP9 signalosome complex subunit 2 n=3 Tax=Amniota TaxID=32524 RepID=A0A5F8GXP3_MONDO)

HSP 1 Score: 56.2 bits (134), Expect = 1.690e-7
Identity = 26/51 (50.98%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    6 EEEYDFEYSDDNEEETDVDLENSYYSAKALKTEDPRAAVEAFRENSLPQRL 56
            EE+YD EYS+D+  E +VDLEN YY++KALK +DP+AA+ +F++ + P+ +
Sbjct:   13 EEDYDLEYSEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKTNYPEMM 63          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: A0A210QGP7_MIZYE (COP9 signalosome complex subunit 2 n=4 Tax=Mollusca TaxID=6447 RepID=A0A210QGP7_MIZYE)

HSP 1 Score: 56.2 bits (134), Expect = 1.690e-7
Identity = 27/43 (62.79%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    7 EEYDFEYSDDNEEETDVDLENSYYSAKALKTEDPRAAVEAFRE 49
            EEYD EYS+++  E DVDLEN YY++KALK +DPRAA+E+F++
Sbjct:   12 EEYDLEYSEESNSEPDVDLENQYYNSKALKEDDPRAALESFQK 54          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: A0A3R7SSM7_PENVA (COP9 signalosome complex subunit 2 n=9 Tax=Eumalacostraca TaxID=72041 RepID=A0A3R7SSM7_PENVA)

HSP 1 Score: 56.2 bits (134), Expect = 1.690e-7
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    6 EEEYDFEYSDDNEEETDVDLENSYYSAKALKTEDPRAAVEAFR 48
            EEEYD EYS+D+  E DVDLEN YY++KALK +DPRAA+ +F+
Sbjct:   13 EEEYDLEYSEDSNSEPDVDLENQYYNSKALKEDDPRAALTSFQ 55          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: T1FM84_HELRO (COP9 signalosome complex subunit 2 n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FM84_HELRO)

HSP 1 Score: 55.5 bits (132), Expect = 3.160e-7
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    7 EEYDFEYSDDNEEETDVDLENSYYSAKALKTEDPRAAVEAFRE 49
            EEYD EYS+D+  E DVDLEN YY++KALK +DP+AA+E F++
Sbjct:   12 EEYDLEYSEDSNSEPDVDLENQYYNSKALKEDDPKAALENFQK 54          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: A0A2G8L5F8_STIJA (COP9 signalosome complex subunit 2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L5F8_STIJA)

HSP 1 Score: 55.5 bits (132), Expect = 3.160e-7
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    9 YDFEYSDDNEEETDVDLENSYYSAKALKTEDPRAAVEAFRE 49
            YD EYS+D+  E DVDLEN YY++KALK +DPRAA+E+F++
Sbjct:   15 YDLEYSEDSNSEPDVDLENQYYNSKALKEDDPRAALESFQK 55          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: D8LNC2_ECTSI (COP9 signalosome complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNC2_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 3.190e-7
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0
Query:   20 ETDVDLENSYYSAKALKTEDPRAAVEAFRE 49
            ETDV LENSYYSAKALK EDP+AAVEAFRE
Sbjct:   50 ETDVGLENSYYSAKALKAEDPKAAVEAFRE 79          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: A0A699YV99_HAELA (COP9 signalosome complex subunit 2 (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YV99_HAELA)

HSP 1 Score: 51.2 bits (121), Expect = 4.220e-7
Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MGDESEEEYDFEYSDDNEEETDVDLENSYYSAKAL-KTEDPRAAVEAFRE 49
            M D+  E+Y FEYS+D +EE DVD+EN YY++K L + EDP+ A+E F +
Sbjct:    1 MSDDDMEDYGFEYSEDEQEEQDVDIENQYYNSKGLLENEDPKEAIEGFNQ 50          
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Match: A0A026WPG4_OOCBI (COP9 signalosome complex subunit n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WPG4_OOCBI)

HSP 1 Score: 53.9 bits (128), Expect = 4.260e-7
Identity = 26/46 (56.52%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    4 ESEEEYDFEYSDDNEEETDVDLENSYYSAKALKTEDPRAAVEAFRE 49
            E EE+Y  EYS+D+  E DVDLEN YY++KALK +DP+AA+++F++
Sbjct:   11 EEEEDYGLEYSEDSNSEPDVDLENQYYNSKALKEDDPKAALQSFQK 56          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2373.6417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A218YTN0_9HELO1.250e-764.58COP9 signalosome complex subunit 2 n=1 Tax=Marsson... [more]
A0A0F8AFC1_LARCR1.290e-750.98Selenocysteine insertion sequence-binding protein ... [more]
A0A5F8GXP3_MONDO1.690e-750.98COP9 signalosome complex subunit 2 n=3 Tax=Amniota... [more]
A0A210QGP7_MIZYE1.690e-762.79COP9 signalosome complex subunit 2 n=4 Tax=Mollusc... [more]
A0A3R7SSM7_PENVA1.690e-765.12COP9 signalosome complex subunit 2 n=9 Tax=Eumalac... [more]
T1FM84_HELRO3.160e-762.79COP9 signalosome complex subunit 2 n=1 Tax=Helobde... [more]
A0A2G8L5F8_STIJA3.160e-763.41COP9 signalosome complex subunit 2 n=1 Tax=Stichop... [more]
D8LNC2_ECTSI3.190e-790.00COP9 signalosome complex subunit 2 n=2 Tax=Ectocar... [more]
A0A699YV99_HAELA4.220e-752.00COP9 signalosome complex subunit 2 (Fragment) n=1 ... [more]
A0A026WPG4_OOCBI4.260e-756.52COP9 signalosome complex subunit n=1 Tax=Ooceraea ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..49
IPR037750COP9 signalosome complex subunit 2PANTHERPTHR10678:SF3COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2373contigH-paniculata_contig2373:2597..5433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2373.6417.1mRNA_H-paniculata_contig2373.6417.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2373 2566..5498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2373.6417.1 ID=prot_H-paniculata_contig2373.6417.1|Name=mRNA_H-paniculata_contig2373.6417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
MGDESEEEYDFEYSDDNEEETDVDLENSYYSAKALKTEDPRAAVEAFREN
SLPQRLCAPQDRVCRMIPSPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037750COPS2