mRNA_H-paniculata_contig2372.6413.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: A0A6H5L2V5_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2V5_9PHAE) HSP 1 Score: 112 bits (281), Expect = 1.750e-27 Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = 1
Query: 13 LLTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
L+ SGTMGNLIAVGAHCRRGDE+I+G SH+ YE AGASA MGVSY + N DGG+ V DIE A+R DDPHYPRS
Sbjct: 207 LVPSGTMGNLIAVGAHCRRGDELILGDKSHIFQYEGAGASALMGVSYHTVRNAEDGGLEVADIETAVRGDDPHYPRS 283
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: A0A2D4C5R1_PYTIN (L-allo-threonine aldolase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5R1_PYTIN) HSP 1 Score: 109 bits (273), Expect = 4.420e-27 Identity = 49/81 (60.49%), Postives = 64/81 (79.01%), Query Frame = 1
Query: 1 PRSPLLTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
P + + SGTMGNLIAVG HCRRGDEII+G SH+ YE AGASA+MGV + ++ NQ+DG +A++D+ A+R DDPHYPR+
Sbjct: 47 PAALFVPSGTMGNLIAVGVHCRRGDEIILGDKSHIFMYEGAGASAYMGVGFHSVRNQSDGTLALEDLANAVRADDPHYPRT 127
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: A0A8K1FBA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBA4_PYTOL) HSP 1 Score: 108 bits (270), Expect = 1.390e-26 Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 16 LTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
+ SGTM NLIAVGAHCRRGDEII+G +H++ YE GASA+MGVS+ + NQTDG + ++D++ AIR DDPHYPRS
Sbjct: 61 VPSGTMANLIAVGAHCRRGDEIILGDKAHIVTYEGGGASAYMGVSFRTVPNQTDGTLRLEDLKDAIRGDDPHYPRS 136
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: A0A6G0XNI5_9STRA (Beta_elim_lyase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNI5_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.940e-26 Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 1 PRSPLLTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
P + + SGTMGNLI+VG HC RGDE+I+G SH+ YE GASAF+GVS + NQ DG + ++DIE AIREDDPH+PRS
Sbjct: 55 PAALFVPSGTMGNLISVGVHCNRGDEVILGNKSHVFKYEGGGASAFLGVSMHTVPNQADGSLLLEDIEAAIREDDPHFPRS 135
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: A0A0P1AV90_PLAHL (L-allo-threonine aldolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AV90_PLAHL) HSP 1 Score: 104 bits (259), Expect = 2.600e-26 Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 16 LTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
+ SGTM NLIA+G HCRRG+EII G +H+ YE AGASA+MGVS ++NQ DG + +KD++ AIR DDPHYPR+
Sbjct: 62 VPSGTMSNLIAIGTHCRRGEEIICGDKAHIFLYEGAGASAYMGVSLHTVENQRDGTLDIKDVQNAIRADDPHYPRT 137
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: A0A8K1FA57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA57_PYTOL) HSP 1 Score: 105 bits (263), Expect = 1.060e-25 Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 1 PRSPLLTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
P + + SGTMGNLIA+GAHCRRGDEII+G SH+ YE GASA+MGVS+ L NQ +G + + D++ A+R+DD HYPR+
Sbjct: 35 PAALYVPSGTMGNLIAIGAHCRRGDEIILGNKSHIFMYEGGGASAYMGVSFHTLPNQANGTLRLDDLKNAVRDDDQHYPRT 115
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: A0A3R7GQH5_9STRA (Beta_elim_lyase domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQH5_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.000e-25 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 16 LTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
+ SGTM NLIA+G HCRRGDE+I G +H+ YE GASA MGVS + NQTDG ++++DI GAIR+DDPHYPR+
Sbjct: 61 VPSGTMANLIAIGTHCRRGDEVICGDKAHIFMYEGGGASAHMGVSLHTIPNQTDGTLSLEDIAGAIRDDDPHYPRT 136
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: A0A485LPZ3_9STRA (Aste57867_24183 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPZ3_9STRA) HSP 1 Score: 104 bits (259), Expect = 5.400e-25 Identity = 49/76 (64.47%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 16 LTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
+ SGTMGNLIAVG HC RGDE+I+G SH+ YE AG SA+MGV + NQT+G M V DI+ AIR DDPHYPRS
Sbjct: 60 VPSGTMGNLIAVGVHCNRGDEVILGNKSHVFKYEGAGVSAYMGVGMHTVPNQTNGTMFVPDIQSAIRGDDPHYPRS 135
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: W2QYD2_PHYPN (Beta_elim_lyase domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=W2QYD2_PHYPN) HSP 1 Score: 104 bits (259), Expect = 5.550e-25 Identity = 46/81 (56.79%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 1 PRSPLLTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
P + + SGTM NLIA+G HCRRGDE+I G +H+ YE GASA+MGVS + NQ DG + +KDI A+R+DDPHYPR+
Sbjct: 57 PAALYVPSGTMSNLIAIGTHCRRGDEVICGDKAHIFLYEGGGASAYMGVSLHTVPNQPDGTLDIKDIHNAVRDDDPHYPRT 137
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Match: K3WHL8_GLOUD (Beta_elim_lyase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHL8_GLOUD) HSP 1 Score: 103 bits (258), Expect = 8.730e-25 Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 1
Query: 16 LTSGTMGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGGMAVKDIEGAIREDDPHYPRS 243
+ SGTM NLIA+GAHCRRGDEIIVG +H+ YE AGASA+MGV + NQ DG M + DI+ A+R DDPHYPR+
Sbjct: 70 VPSGTMSNLIALGAHCRRGDEIIVGDKAHIFMYEGAGASAYMGVGLHTVKNQPDGTMKLADIQDAVRADDPHYPRT 145 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2372.6413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2372.6413.1 >prot_H-paniculata_contig2372.6413.1 ID=prot_H-paniculata_contig2372.6413.1|Name=mRNA_H-paniculata_contig2372.6413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp MGNLIAVGAHCRRGDEIIVGTNSHMICYEAAGASAFMGVSYSALDNQTDGback to top mRNA from alignment at H-paniculata_contig2372:21090..21332+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2372.6413.1 ID=mRNA_H-paniculata_contig2372.6413.1|Name=mRNA_H-paniculata_contig2372.6413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=243bp|location=Sequence derived from alignment at H-paniculata_contig2372:21090..21332+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2372:21090..21332+ >mRNA_H-paniculata_contig2372.6413.1 ID=mRNA_H-paniculata_contig2372.6413.1|Name=mRNA_H-paniculata_contig2372.6413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=426bp|location=Sequence derived from alignment at H-paniculata_contig2372:21090..21332+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |