mRNA_H-paniculata_contig23694.6399.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE) HSP 1 Score: 138 bits (347), Expect = 1.480e-36 Identity = 65/67 (97.01%), Postives = 67/67 (100.00%), Query Frame = 1
Query: 1 HTAAVYVAKFAPRDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQ 201
HTAAVYVAKF+PRDSLVASAGFDRTLRLWEG+YPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQ
Sbjct: 138 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQ 204
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.180e-16 Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query: 1 HTAAVYVAKFAPRDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISD 150
HTAAVY F+P +LVAS GFDRT+RLWEG YP+SQVACL HRQL+SD
Sbjct: 80 HTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSD 129
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A1V9Z1V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1V2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.230e-8 Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 1 HTAAVYVAKFAPRDSLVASAGFDRTLRLWEGSYPYSQ--VACLEGHRQLISDLCWAPDGRSLLSASFDQVFH 210
H AVY KF+P L+AS D + LW+ + ++Q +A L H QL+ D+ W+ D RSLLSAS+D +
Sbjct: 118 HGGAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLASHNQLVIDMSWSNDSRSLLSASYDHTVN 189
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV) HSP 1 Score: 56.6 bits (135), Expect = 1.460e-7 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 10 AVYVAKFAPRDSLVASAGFDRTLRLWEGSYPYSQ--VACLEGHRQLISDLCWAPDGRSLLSASFDQVFH 210
AVY KF+P L+AS D + LW+ + ++Q +A L H QLI D+ W+ D RSLLSAS+D +
Sbjct: 134 AVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLTQHNQLIIDISWSNDSRSLLSASYDHTVN 202
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A1V2LDD2_CYBFA (Protein HIR n=2 Tax=Cyberlindnera fabianii TaxID=36022 RepID=A0A1V2LDD2_CYBFA) HSP 1 Score: 53.1 bits (126), Expect = 2.490e-6 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 1
Query: 43 SLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFD 198
S+VA+AG D++L +W YP V E + I+DLCW PDG SL +S D
Sbjct: 267 SVVATAGHDKSLAIWNNMYPRPVVVFEEFSMKTITDLCWTPDGSSLFVSSLD 318
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A7S1NRB8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NRB8_9EUGL) HSP 1 Score: 50.1 bits (118), Expect = 8.840e-6 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 1
Query: 13 VYVAKFAPRDSLVASAGFDRTLRLWEGSY-PYSQVACLEGHRQLISDLCWAPDGRSLLSASFD 198
+Y A F+P SL+A G+D + LW G+ + L GH +S L +APDGR+LLSAS D
Sbjct: 2 IYGADFSPDGSLLALGGWDGRVSLWGGANGALCLLRTLTGHTGFVSALAFAPDGRTLLSASGD 64
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A7S3R2P6_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R2P6_DUNTE) HSP 1 Score: 51.2 bits (121), Expect = 1.160e-5 Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 49 VASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQ 201
+AS D T+ LW S VA + GH Q ++ +C++PDGR LLSASFD+
Sbjct: 343 MASGSDDYTMFLWSPSTSKQHVARMTGHMQTVNQVCFSPDGRLLLSASFDK 393
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A2V0NRX9_9CHLO (NLE domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NRX9_9CHLO) HSP 1 Score: 50.4 bits (119), Expect = 2.230e-5 Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 37 RDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQ 201
R + S D T+ LW+ S + +A L GH QLI+ +C++PDGR +LSASFD+
Sbjct: 346 RPERLVSGSDDFTMFLWQPSTGKAHLARLTGHVQLINQVCFSPDGRWVLSASFDK 400
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A0P4WHU8_SCYOL (NLE domain-containing protein n=3 Tax=Portunidae TaxID=6757 RepID=A0A0P4WHU8_SCYOL) HSP 1 Score: 49.7 bits (117), Expect = 4.100e-5 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 49 VASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQ 201
+AS D TL LWE S VA L GH+QL++D+ ++PD R++ SASFD+
Sbjct: 420 LASGSDDFTLFLWEPSRDKKPVARLTGHQQLVNDVKFSPDTRTIASASFDK 470
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Match: A0A0B2WLG3_METAS (WD40 repeat-like-containing domain protein n=1 Tax=Metarhizium album (strain ARSEF 1941) TaxID=1081103 RepID=A0A0B2WLG3_METAS) HSP 1 Score: 49.7 bits (117), Expect = 4.190e-5 Identity = 26/74 (35.14%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 1 HTAAVYVAKFAPRDSLVASAGFDRTLRLWE-----GSYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQVF 207
H AV+ F+P S +A+A D+T+ +W+ GS P + +EGH+ + +CWA +GR ++S S D F
Sbjct: 220 HDNAVHSVAFSPHGSRLATASLDKTVGVWDMPSTGGSKP-GFLRAMEGHKDTVLSVCWAENGRWVISGSKDGSF 292 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23694.6399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23694.6399.1 >prot_H-paniculata_contig23694.6399.1 ID=prot_H-paniculata_contig23694.6399.1|Name=mRNA_H-paniculata_contig23694.6399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp HTAAVYVAKFAPRDSLVASAGFDRTLRLWEGSYPYSQVACLEGHRQLISDback to top mRNA from alignment at H-paniculata_contig23694:3221..3448+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23694.6399.1 ID=mRNA_H-paniculata_contig23694.6399.1|Name=mRNA_H-paniculata_contig23694.6399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=228bp|location=Sequence derived from alignment at H-paniculata_contig23694:3221..3448+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23694:3221..3448+ >mRNA_H-paniculata_contig23694.6399.1 ID=mRNA_H-paniculata_contig23694.6399.1|Name=mRNA_H-paniculata_contig23694.6399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=456bp|location=Sequence derived from alignment at H-paniculata_contig23694:3221..3448+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |