prot_H-paniculata_contig2355.6362.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2355.6362.1
Unique Nameprot_H-paniculata_contig2355.6362.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A5D3CWZ1_CUCME (Gag/pol protein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3CWZ1_CUCME)

HSP 1 Score: 91.3 bits (225), Expect = 1.920e-18
Identity = 52/155 (33.55%), Postives = 90/155 (58.06%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGIV--KTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            A R W+++    +K+ GF+Q+  + CV++KI+ G+V  + V +VDD L+ R     + ++ A L +++ ++DLGEA+Y LG  I RD+  +   + Q  Y   +   + +   K  +LP    G  LSKE  P+T +EV++++  PY  AV +LM
Sbjct:  118 ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL-VLYVDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFR-HGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLM 270          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A165U314_9ROSI (Gag/pol protein n=1 Tax=Momordica dioica TaxID=654836 RepID=A0A165U314_9ROSI)

HSP 1 Score: 90.5 bits (223), Expect = 3.790e-18
Identity = 53/155 (34.19%), Postives = 87/155 (56.13%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGIV--KTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            A R W+++  E +KA GF Q+  +SCV++KIS   V  + + +VDD L+       +E++   L + + ++DLGEA+Y LG  I RD+  +   + Q  Y   +   F +   K  +LP    G  LSKE  P+T +EV++++  PY  A+ +LM
Sbjct:  976 ASRSWNIRFDEVIKAFGFIQNVDESCVYKKISGSVVAFL-ILYVDDILLIGNDVEYLEDVKKWLNTSFSMKDLGEAQYILGIRIYRDRSNKTIGMSQSTYIDKVLSRFKMQDSKKGLLPFR-HGIHLSKEQCPKTPQEVEDMRNIPYSSAIGSLM 1128          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A5A7TZD0_CUCME (Gag/pol protein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TZD0_CUCME)

HSP 1 Score: 90.1 bits (222), Expect = 5.140e-18
Identity = 51/155 (32.90%), Postives = 89/155 (57.42%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGIV--KTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            A R W+++    +K+ GF+Q+  + CV++KI+ G+V  + V +VDD L+       + ++ A L +++ ++DLGEA+Y LG  I RD+  +   + Q  Y   +   + +   K  +LP    G  LSKE  P+T +EV++++  PY  AV +LM
Sbjct:  868 ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL-VLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFR-HGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1020          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A5A7UYE8_CUCME (Gag/pol protein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7UYE8_CUCME)

HSP 1 Score: 90.1 bits (222), Expect = 5.200e-18
Identity = 51/155 (32.90%), Postives = 89/155 (57.42%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGIV--KTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            A R W+++    +K+ GF+Q+  + CV++KI+ G+V  + V +VDD L+       + ++ A L +++ ++DLGEA+Y LG  I RD+  +   + Q  Y   +   + +   K  +LP    G  LSKE  P+T +EV++++  PY  AV +LM
Sbjct:  742 ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL-VLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFR-HGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 894          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A5D3CZY3_CUCME (Gag/pol protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3CZY3_CUCME)

HSP 1 Score: 89.0 bits (219), Expect = 1.240e-17
Identity = 52/155 (33.55%), Postives = 89/155 (57.42%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGIV--KTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            A R W+++    +K+ GFEQ+  + CV++KI+ G+V  + V +VDD L+       + ++ A L +++ ++DLGEA+Y LG  I RD+  +   + Q  Y   +   + +   K  +LP    G  LSKE  P+T +EV++++  PY  AV +LM
Sbjct:  478 ASRSWNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFL-VLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFR-HGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLM 630          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: UPI001F373689 (DDE-type integrase/transposase/recombinase n=4 Tax=Terrabacteria group TaxID=1783272 RepID=UPI001F373689)

HSP 1 Score: 88.2 bits (217), Expect = 2.410e-17
Identity = 51/155 (32.90%), Postives = 84/155 (54.19%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGI--VKTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            A R W++K  + +K+ GF+Q+  + CV++K S   V  + V +VDD L+      +M      L S++ ++DLGEA Y LG  + RD+  +   + Q  Y + I   + +   K  +LP    G PLS+   P+T EE++ ++  PY  AV +LM
Sbjct:  863 ASRAWNIKFNQAVKSFGFDQNIDEPCVYKKGSGNAVAFL-VLYVDDILLIGNDVGMMSSTKVWLSSQFQMKDLGEASYVLGIKLLRDRKNKMLALSQSSYIEKILVKYNMHDSKKGLLPSR-HGVPLSRNQCPKTPEEIESMRRVPYASAVGSLM 1015          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A6H5JFZ2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFZ2_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.530e-17
Identity = 54/153 (35.29%), Postives = 78/153 (50.98%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGIVKTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            +GR W  +  + L   G+EQ   D CVFRK+ DGEV  + V +VDD L+A  G     ELLA L  K+ ++DLGE  +Y GC I  D      K+ Q  Y +++ + F +  T+  P          + GP+  +E    +  P REA+  LM
Sbjct:  389 SGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADGGE-RGELLASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDA-----DLGPKRDDEPAVDK--PVREAIGCLM 533          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A150G7P2_GONPE (Integrase catalytic domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7P2_GONPE)

HSP 1 Score: 87.0 bits (214), Expect = 5.810e-17
Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGIVKTS-----MLPGTV 123
            A R W  ++   LKA+GF+ S +D  +F K  DG+ R+  + +VDD LIA      + ++ + L SK+ IRDLGEA+++LG  I RD+  R  K+ Q  YA+T+   FG+ +       M+PGTV
Sbjct:  663 ASRTWYERLRSELKAMGFKPSESDPGLFVKEEDGD-RVFLLVYVDDLLIAAMKLETVAQIKSRLMSKFEIRDLGEARFFLGYEIERDRAARTLKLSQKRYAETVLAKFGMEQAHAKSVPMIPGTV 786          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A6H5K8K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 6.120e-17
Identity = 55/153 (35.95%), Postives = 78/153 (50.98%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQTIAELFGIVKTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            +GR W  +  + L A G+EQ  AD CVFR++ DGEV  + V +VDD L+        +ELLA LQ K+ ++DLGE  +Y G  I  D      K+ Q  Y ++I + F +  T+  P   G     K D   T ++       P REA+  LM
Sbjct:  953 SGREWGFEAADALIANGYEQCRADPCVFRRMVDGEVVGLIVIYVDDILLVASEQE-RQELLASLQKKFPVKDLGECTWYDGIGIEMDLENGITKLSQTAYIESIIKRFNVTTTAPTPAVPGADLGPKRDDEPTVDK-------PVREALGCLM 1097          
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Match: A0A5D3BW42_CUCME (Gag/pol protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3BW42_CUCME)

HSP 1 Score: 86.3 bits (212), Expect = 8.600e-17
Identity = 52/155 (33.55%), Postives = 88/155 (56.77%), Query Frame = 0
Query:    4 AGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDFLIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQHLYAQT--IAELFGIVKTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYREAVRALM 156
            A R W+++    +K+ GF+Q+  + CV++K + G+V  + V +VDD L+       + ++ A L +++ I+DLGEA+Y LG  I RD+ ++   + Q  Y     +  L    K  +LP    G  LSKE  P+T +EV++++  PY  AV +LM
Sbjct:  287 ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKNNKGKVAFL-VLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFR-HGVHLSKEQCPKTPQEVEDMRRIPYALAVGSLM 439          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2355.6362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5D3CWZ1_CUCME1.920e-1833.55Gag/pol protein n=2 Tax=Cucumis melo var. makuwa T... [more]
A0A165U314_9ROSI3.790e-1834.19Gag/pol protein n=1 Tax=Momordica dioica TaxID=654... [more]
A0A5A7TZD0_CUCME5.140e-1832.90Gag/pol protein n=2 Tax=Cucumis melo var. makuwa T... [more]
A0A5A7UYE8_CUCME5.200e-1832.90Gag/pol protein n=2 Tax=Cucumis melo var. makuwa T... [more]
A0A5D3CZY3_CUCME1.240e-1733.55Gag/pol protein n=1 Tax=Cucumis melo var. makuwa T... [more]
UPI001F3736892.410e-1732.90DDE-type integrase/transposase/recombinase n=4 Tax... [more]
A0A6H5JFZ2_9PHAE5.530e-1735.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A150G7P2_GONPE5.810e-1739.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K8K4_9PHAE6.120e-1735.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D3BW42_CUCME8.600e-1733.55Gag/pol protein n=1 Tax=Cucumis melo var. makuwa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..115
e-value: 8.4E-15
score: 55.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2355contigH-paniculata_contig2355:11878..12348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2355.6362.1mRNA_H-paniculata_contig2355.6362.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2355 11527..12408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2355.6362.1 ID=prot_H-paniculata_contig2355.6362.1|Name=mRNA_H-paniculata_contig2355.6362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MVHAGRCWSMKVTENLKAVGFEQSHADSCVFRKISDGEVRMIGVSHVDDF
LIARKGPVIMEELLADLQSKYLIRDLGEAKYYLGCHIPRDKLRREFKIDQ
HLYAQTIAELFGIVKTSMLPGTVGGKPLSKEDGPRTQEEVQEIQIFPYRE
AVRALM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2