mRNA_H-paniculata_contig2346.6334.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2346.6334.1
Unique NamemRNA_H-paniculata_contig2346.6334.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 1.710e-73
Identity = 123/162 (75.93%), Postives = 136/162 (83.95%), Query Frame = 2
Query: 1247 QGLGPALFGNAVAWGGFFYCYERFKEFARGR-SIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAVTSDAVRPYTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLKARVPKQSENTPLESLVMGGISKILSSLVTYPSQVI 1729
            QGLGPAL GNAVAWGGFFYCYE+ K   R R   EA+LG +HHLGAG++AGA MV ATNPVWMIKTRMQLQ+    S  VRPY+G  DAVRTI REEGPLALYKGAVPALMLC QGAVQF VYEWLKARVPK++ENTP ESL+MGG SKILS+LVTYP+Q +
Sbjct:  100 QGLGPALLGNAVAWGGFFYCYEKIKTAIRARVPQEADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGVRPYSGLMDAVRTITREEGPLALYKGAVPALMLCGQGAVQFAVYEWLKARVPKRNENTPQESLLMGGASKILSTLVTYPTQYL 261          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: A0A835YH58_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH58_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.560e-65
Identity = 123/230 (53.48%), Postives = 158/230 (68.70%), Query Frame = 2
Query: 1250 GLGPALFGNAVAWGGFFYCYERFKEFARGRSIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAVTSD-AVRPYTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLKARVPKQ-SENTPLESLVMGGISKILSSLVTYPSQVIKSRLQQRGTQSEIRTSVSR--YRGVIHCATTIARREGMRGFFKGCVPYAVRAAPASAITFVVYEEVMK 1927
            GL P+++G  +AWG +FY Y+  K+  +  +   +L   HHL AG +    +V   NPVW++KTR+QLQ    T     RPY GF+DA+ TI REEG LALYKG VPA++L TQGA+QF  YEWLK  VP+   ++ P+ESLVMGG SKI +S+VTYP+QVIK+RLQ R   +    +  R  Y G   CA  I R+EG RGFF+GCVPYA+RAAPASA+TFVVYEE M+
Sbjct:  108 GLVPSVWGGGLAWGAYFYLYQMSKDALQTGTGAEQLNVSHHLTAGNI----LVLLGNPVWLVKTRLQLQTRDNTQRLGRRPYRGFTDALVTIAREEGALALYKGIVPAMLLSTQGALQFAAYEWLKGWVPRDLQQSKPVESLVMGGGSKIFASVVTYPTQVIKTRLQDRAAAAVSAAAAGRSIYTGTAQCAALIWRQEGARGFFRGCVPYALRAAPASAVTFVVYEEAMR 333          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: B7FQZ1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQZ1_PHATC)

HSP 1 Score: 198 bits (504), Expect = 1.520e-53
Identity = 109/236 (46.19%), Postives = 139/236 (58.90%), Query Frame = 2
Query: 1250 GLGPALFGNAVAWGGFFYCYERFKEFARGRSIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAVTSDA-VRPYTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLKARVPKQSENTPLESLVMGGISKILSSLVTYPSQVIKSRLQQRG------TQSEIRTSVSRYRGVIHCATTIARREGMRGFFKGCVPYAVRAAPASAITFVVYEEVMKFLN 1936
            G  PA+ G+AV+WGG+F+ YE FK+      +   L  L +      AG  MV  TNP+W+IK RMQLQ    +    ++PY    DAV TIVREEGPLALYKG  PAL+L + G VQF VYE+LK     Q  N         GI+K L + VTYP Q IK+R+QQR          E+R     YRG+      + R+EG  GFFKGC+P A+R AP +AITFVVYE +M +L+
Sbjct:   76 GWTPAVIGSAVSWGGYFFFYESFKKQLSASDV---LSSLDNFALACTAGGVMVLMTNPIWLIKIRMQLQMKRASELLNIKPYRNIGDAVATIVREEGPLALYKGVGPALLLTSHGGVQFVVYEYLKKHFRFQRINREETGRATQGITKRLQNTVTYPLQTIKARMQQRSDALEFTADGEVRAVRRDYRGLFSTIKRVFRQEGFVGFFKGCIPNAIRVAPGAAITFVVYEALMDYLD 308          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: W7T4J3_9STRA (Mitochondrial folate transporter carrier-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J3_9STRA)

HSP 1 Score: 201 bits (510), Expect = 4.820e-53
Identity = 117/251 (46.61%), Postives = 152/251 (60.56%), Query Frame = 2
Query: 1247 QGLGPALFGNAVAWGGFFYCYERFKEFARGRSIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQ----------NTAVTSDAVRP----------YTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLKARVPKQSENTPLESL-VMGGISKILSSLVTYPSQVIKSRLQQRGTQSEIRTSVSRYRGVIHCATTIARREGMRGFFKGCVPYAVRAAPASAITFVVYEEVMKFLN 1936
            +GL PAL  N ++WGG+FY YE  K   R      ++  +HHL + F AG  MVF TNP+W+IKTRMQLQ            AVT+  V            YTG + A+RTIVREEG L LYKG +PAL+L + GA+QF  YEWLK  V  +    P+ S  V+GG++KIL+ LVTYP QV+K+RLQQR T +    S  RY     C   I R EG+ GFFKGC+P  ++ AP++ ITF+VYE+ +   N
Sbjct:  134 KGLTPALLANGLSWGGYFYFYEHAKN--RYLRQHRQITSVHHLLSAFEAGIIMVFLTNPLWLIKTRMQLQPGGASALESMTKAVTAPIVASTASHLGKQIAYTGVTQALRTIVREEGVLGLYKGILPALLLTSHGAIQFVTYEWLKKVV--EPYQAPVFSFSVLGGMAKILAGLVTYPPQVVKARLQQRDTGA----SRWRYTSTWDCVLKIWRFEGLLGFFKGCLPNVLKTAPSAVITFLVYEQCVFSFN 376          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: B5YLY4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLY4_THAPS)

HSP 1 Score: 196 bits (497), Expect = 8.170e-53
Identity = 114/243 (46.91%), Postives = 141/243 (58.02%), Query Frame = 2
Query: 1247 QGLGPALFGNAVAWGGFFYCYERFKEFARGRSIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAVTSDAVRP--------YTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLKA------RVPKQSENTPLESLVMGGISKILSSLVTYPSQVIKSRLQQRGTQSEIRTSVSRYRGVIHCATTIARREGMRGFFKGCVPYAVRAAPASAITFVVYEEVMKFL 1933
            +GL PA+ G+A +WGGFF  YE  K+    R I+     L       ++GA MV  TNP+W+IKTR+QLQN+ +     +P        Y G   A  TIV+EEG LALYKG+VPALML + G +QF  YEWLK       R   +        LVMG  SK ++S  TYP QVIK+RLQQR        S   Y GVI C   I R EG+ GFFKGCV  A+R AP++AITFVVYE V+  L
Sbjct:   56 KGLTPAIIGSAASWGGFFILYEEMKQVMLQRKIKFANAALD---TSCLSGACMVALTNPLWLIKTRLQLQNSRLQQQLSQPNGPPLKPPYRGLVHAAFTIVKEEGVLALYKGSVPALMLVSHGGIQFVSYEWLKGHFAAWNRTIGERLRASFGYLVMGATSKFIASTTTYPLQVIKARLQQR--------SQREYSGVIDCVGKIWRNEGVGGFFKGCVTNALRVAPSAAITFVVYESVLDAL 287          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: A0A7S4JAZ4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAZ4_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.000e-51
Identity = 135/320 (42.19%), Postives = 160/320 (50.00%), Query Frame = 2
Query: 1247 QGLGPALFGNAVAWGGFFYCYERFKE--------------FARGRSIEA-------------------------------------ELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAV---TSDAVR----------PYTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLK---------ARVPK----QSENTPLESL-------VMGGISKILSSLVTYPSQVIKSRLQQRGTQSEIRTS-----VSR-YRGVIHCATTIARREGMRGFFKGCVPYAVRAAPASAITFVVYEEVMKFLN 1936
            QGL PAL G+A +WGG+F+ YE  K                 RG S +A                                      LGP+ +  A   AGAAMV  TNPVW+IKTRMQLQ         D +R          PY   +DA RTIVREEGPLALYKGAVPALML + G VQF  YE+LK         AR  K    Q  N  +E L        MG +SK+++S  TYP QVIK+RLQQR    E+  +     V R Y GV  C   I R EG  GFFKGC+P AVR AP++AITFV+YE VM  L+
Sbjct:  112 QGLTPALVGSAASWGGYFFLYEGIKREWIERRREERERRRMRRGPSNDAAGTRPHDLSKDMHVDEEIDLRNGDGDDDDCGGANEHCSLGPMENFSAACAAGAAMVLVTNPVWLIKTRMQLQMKRTLERNKDCIRGAKGGADVKPPYRSMADAARTIVREEGPLALYKGAVPALMLVSHGGVQFVSYEFLKEHFGTYTRAARSRKDEAGQERNGTMEKLQDSLGYLAMGAVSKMIASTATYPLQVIKARLQQRNQSVELTEAGDLAVVRREYGGVADCVARIFRNEGPVGFFKGCIPNAVRVAPSAAITFVMYETVMDMLS 431          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: A0A8J2T2A8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2A8_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.980e-50
Identity = 114/294 (38.78%), Postives = 157/294 (53.40%), Query Frame = 2
Query: 1064 IYP---ASTRLRDQANVNNT**IILIRSAVEARAGMRASFDVLPIPSSSFCVKY*CQR*CPVCVQGLGPALFGNAVAWGGFFYCYERFKEFARGRSIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAVTSDAVRPYTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLKARVPKQSENTPLESLVMGGISKILSSLVTYPSQVIKSRLQQR--GTQSEIRTSV--SRYRGVIHCATTIARREGMRGFFKGCVPYAVRAAPASAITFVVYEEVM 1924
            +YP      R +    V     ++   S+V  R G+R+ F+                        GL PAL G+A++WGGFFY YERFK              ++H  A   +GA MV  TNPVW++KTR+QLQ         + Y G  DA   I++EEG LALY+G +PAL L + GAVQF VYE LK   P  ++    E+LV GG+SK+ ++  TYP QV+K+R+QQR   T S  + ++        + C     R EG+RGFFKGC P A+R AP++A+TF  YE V+
Sbjct:   29 LYPLDLVKVRFQADTRVERMPGVVAAASSVIRREGLRSLFN------------------------GLSPALLGSALSWGGFFYFYERFKP--------QNASAMNHAVASIQSGACMVLLTNPVWLVKTRLQLQKD-------QRYKGILDAFSRIIKEEGWLALYRGILPALFLTSHGAVQFVVYEKLKELRPPSTDAGRSEALVYGGVSKLAAATATYPYQVVKTRVQQRYPNTNSNFKGNLPAGEIARTLKCVGDTFRVEGIRGFFKGCWPNALRVAPSAALTFWTYEVVV 283          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: FOLT1_ARATH (Folate transporter 1, chloroplastic n=35 Tax=Brassicaceae TaxID=3700 RepID=FOLT1_ARATH)

HSP 1 Score: 189 bits (480), Expect = 3.120e-50
Identity = 110/250 (44.00%), Postives = 155/250 (62.00%), Query Frame = 2
Query: 1250 GLGPALFGNAVAWGGFFYCYERFKE-FARGRSIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAVTSDAVRPYTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLKARVP------KQSENTP-----LESLVMGGISKILSSLVTYPSQVIKSRLQQRGTQSEIRTSVSRYRGVIHCATTIARREGMRGFFKGCVPYAVRAAPASAITFVVYEEVMKFLN*SRQHRPTT 1963
            G  PA+ G+ V+WG +F+ Y R K+ +ARGR  E +L P  HL +   AGA +   TNP+W++KTR+QLQ         +PY+G  DA RTIV+EEGP ALYKG VP L+L + GA+QFT YE L+  +       ++SE+T       +   +GG SK+ + L+TYP QVI++RLQQR + +     + RY   +H     AR EG+RGF++G     ++  PAS+ITF+VYE V+K L   +QH PTT
Sbjct:   69 GFFPAVIGSTVSWGLYFFFYGRAKQRYARGRDDE-KLSPALHLASAAEAGALVCLCTNPIWLVKTRLQLQTPL---HQTQPYSGLLDAFRTIVKEEGPRALYKGIVPGLVLVSHGAIQFTAYEELRKIIVDLKERRRKSESTDNLLNSADYAALGGSSKVAAVLLTYPFQVIRARLQQRPSTN----GIPRYIDSLHVIRETARYEGLRGFYRGLTANLLKNVPASSITFIVYENVLKLL---KQH-PTT 306          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: A0A1U8FRE8_CAPAN (folate transporter 1, chloroplastic-like isoform X2 n=2 Tax=Solanoideae TaxID=424551 RepID=A0A1U8FRE8_CAPAN)

HSP 1 Score: 186 bits (471), Expect = 1.030e-49
Identity = 105/247 (42.51%), Postives = 148/247 (59.92%), Query Frame = 2
Query: 1250 GLGPALFGNAVAWGGFFYCYERFKE-FARGRSIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAVTSDAVRPYTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLK---ARVPKQSENTPLESLV----------MGGISKILSSLVTYPSQVIKSRLQQRGTQSEIRTSVSRYRGVIHCATTIARREGMRGFFKGCVPYAVRAAPASAITFVVYEEVMKFLN*SRQ 1948
            G  PA+ G+ ++WG +F+ Y + K+ + R R    EL P  HL +   AGA + F TNP+W++KTR+QLQ    T + +RPYTGF DA+RTI ++EG  ALYKG +P+L L T GA+QFT YE L+     +  Q    PL +            +G  SK+++ L TYP QV++SRLQQR +     T V RY    H     AR EG+RGF++G     ++ APA++ITF+VYE V+  L  SR+
Sbjct:   14 GFYPAVLGSTISWGLYFFFYSKAKQRYLRNRE---ELSPGLHLASAAEAGALVCFCTNPIWLVKTRLQLQ----TPNQIRPYTGFHDALRTIFKDEGWRALYKGLMPSLFLVTHGAIQFTAYEELRKVLVSLKAQENENPLATAADLLDSVDYATLGASSKLVAVLTTYPFQVVRSRLQQRPST----TGVPRYMDSWHVVKETARFEGIRGFYRGITANVLKNAPAASITFIVYENVLNMLKFSRR 249          
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Match: A0A836CHG8_9STRA (Folate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.080e-49
Identity = 94/166 (56.63%), Postives = 115/166 (69.28%), Query Frame = 2
Query: 1247 QGLGPALFGNAVAWGGFFYCYERFKEFARGRSIEAELGPLHHLGAGFMAGAAMVFATNPVWMIKTRMQLQNTAVTSDAV----RPYTGFSDAVRTIVREEGPLALYKGAVPALMLCTQGAVQFTVYEWLKARVPKQ-SENTPLESLVMGGISKILSSLVTYPSQVI 1729
             GLGPA+ G+ V+WGG+FY YE  K   R  S   +LGP+HHL AG  AG A+V  TNP+W++KTRMQLQ             RPYTG SDAV TIVREEG LALYKG VPAL+L  QGA+QF  YEWLKARVP+  ++N P ESL+MG  SK+ +SLV  P+ ++
Sbjct:   58 SGLGPAVLGSGVSWGGYFYLYEWAKTSMRRFSDTEKLGPVHHLTAGMAAGNALVLLTNPIWLVKTRMQLQQXXXXXXTAAAGRRPYTGLSDAVATIVREEGALALYKGVVPALLLSGQGALQFAAYEWLKARVPRNLAQNDPHESLLMGASSKVFASLVRTPNMLL 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2346.6334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB8_ECTSI1.710e-7375.93Folate transporter n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835YH58_9STRA1.560e-6553.48Mitochondrial carrier domain-containing protein n=... [more]
B7FQZ1_PHATC1.520e-5346.19Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
W7T4J3_9STRA4.820e-5346.61Mitochondrial folate transporter carrier-like prot... [more]
B5YLY4_THAPS8.170e-5346.91Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4JAZ4_9STRA1.000e-5142.19Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A8J2T2A8_9STRA1.980e-5038.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
FOLT1_ARATH3.120e-5044.00Folate transporter 1, chloroplastic n=35 Tax=Brass... [more]
A0A1U8FRE8_CAPAN1.030e-4942.51folate transporter 1, chloroplastic-like isoform X... [more]
A0A836CHG8_9STRA1.080e-4956.63Folate transporter (Fragment) n=1 Tax=Tribonema mi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2346contigH-paniculata_contig2346:12417..17029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score179.5
Seed ortholog evalue1.4e-42
Seed eggNOG ortholog2880.D7FQB8
Preferred nameSLC25A32
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K02935,ko:K15115
KEGG TC2.A.29.10.1,2.A.29.10.2,2.A.29.10.3,2.A.29.10.5
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,ko03010,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110,map03010
KEGG ModuleM00178
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006520,GO:0006544,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0006862,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008517,GO:0009069,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0015075,GO:0015215,GO:0015230,GO:0015238,GO:0015318,GO:0015605,GO:0015711,GO:0015748,GO:0015849,GO:0015883,GO:0015884,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0017144,GO:0019752,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0034220,GO:0034641,GO:0035350,GO:0035461,GO:0042133,GO:0042221,GO:0042493,GO:0042558,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046483,GO:0046655,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051182,GO:0051184,GO:0051186,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072337,GO:0072349,GO:0090482,GO:0098573,GO:0098656,GO:0098838,GO:1901360,GO:1901564,GO:1901605,GO:1901679,GO:1903825,GO:1904947,GO:1905039,GO:1990542,GO:1990548
EggNOG free text desc.Belongs to the mitochondrial carrier (TC 2.A.29) family
EggNOG OGsKOG0764@1,KOG0764@2759
EC1.4.3.21
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko02000,ko03011
Exons6
Model size2649
Cds size552
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2346.6334.1prot_H-paniculata_contig2346.6334.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2346 13127..15182 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929665.9640012-UTR-H-paniculata_contig2346:12416..131261622929665.9640012-UTR-H-paniculata_contig2346:12416..13126Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2346 12417..13126 -
1691480958.1409922-UTR-H-paniculata_contig2346:12416..131261691480958.1409922-UTR-H-paniculata_contig2346:12416..13126Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2346 12417..13126 -
1622929666.0345936-UTR-H-paniculata_contig2346:15182..152481622929666.0345936-UTR-H-paniculata_contig2346:15182..15248Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2346 15183..15248 -
1691480958.196905-UTR-H-paniculata_contig2346:15182..152481691480958.196905-UTR-H-paniculata_contig2346:15182..15248Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2346 15183..15248 -
1622929666.0493937-UTR-H-paniculata_contig2346:15679..165081622929666.0493937-UTR-H-paniculata_contig2346:15679..16508Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2346 15680..16508 -
1691480958.2053297-UTR-H-paniculata_contig2346:15679..165081691480958.2053297-UTR-H-paniculata_contig2346:15679..16508Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2346 15680..16508 -
1622929666.0635478-UTR-H-paniculata_contig2346:16537..170291622929666.0635478-UTR-H-paniculata_contig2346:16537..17029Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2346 16538..17029 -
1691480958.2154784-UTR-H-paniculata_contig2346:16537..170291691480958.2154784-UTR-H-paniculata_contig2346:16537..17029Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2346 16538..17029 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929665.976567-CDS-H-paniculata_contig2346:13126..133421622929665.976567-CDS-H-paniculata_contig2346:13126..13342Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2346 13127..13342 -
1691480958.1558387-CDS-H-paniculata_contig2346:13126..133421691480958.1558387-CDS-H-paniculata_contig2346:13126..13342Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2346 13127..13342 -
1622929665.9899867-CDS-H-paniculata_contig2346:13801..138731622929665.9899867-CDS-H-paniculata_contig2346:13801..13873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2346 13802..13873 -
1691480958.1649895-CDS-H-paniculata_contig2346:13801..138731691480958.1649895-CDS-H-paniculata_contig2346:13801..13873Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2346 13802..13873 -
1622929666.0013773-CDS-H-paniculata_contig2346:14394..145401622929666.0013773-CDS-H-paniculata_contig2346:14394..14540Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2346 14395..14540 -
1691480958.1764302-CDS-H-paniculata_contig2346:14394..145401691480958.1764302-CDS-H-paniculata_contig2346:14394..14540Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2346 14395..14540 -
1622929666.016545-CDS-H-paniculata_contig2346:15064..151821622929666.016545-CDS-H-paniculata_contig2346:15064..15182Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2346 15065..15182 -
1691480958.1860924-CDS-H-paniculata_contig2346:15064..151821691480958.1860924-CDS-H-paniculata_contig2346:15064..15182Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2346 15065..15182 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2346.6334.1

>prot_H-paniculata_contig2346.6334.1 ID=prot_H-paniculata_contig2346.6334.1|Name=mRNA_H-paniculata_contig2346.6334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
MAGAAMVFATNPVWMIKTRMQLQNTAVTSDAVRPYTGFSDAVRTIVREEG
PLALYKGAVPALMLCTQGAVQFTVYEWLKARVPKQSENTPLESLVMGGIS
KILSSLVTYPSQVIKSRLQQRGTQSEIRTSVSRYRGVIHCATTIARREGM
RGFFKGCVPYAVRAAPASAITFVVYEEVMKFLN*
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mRNA from alignment at H-paniculata_contig2346:12417..17029-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2346.6334.1 ID=mRNA_H-paniculata_contig2346.6334.1|Name=mRNA_H-paniculata_contig2346.6334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4613bp|location=Sequence derived from alignment at H-paniculata_contig2346:12417..17029- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCGAAGCCGCGACCAGAAGCCTCGAAAAAATATAATCTCTCGAAAAAAC ACTCCATCATCTATTGCCCACGAAAGAAAAAAAAAGCGATATCAGTCACA GAGGGGACACGCACAGAAACGCCGACGCGGATGGTCACAGAAACGGCAAG AGCATGTTCCCCGTCGTCAAGGTCCCGGTCATGGGCTCCCATCACAGGGA ATGGCTCGCGGGCACGGTCTGAAGCAATCAAGCTCCGAGCGAAGGCGGTC GAAAGGGAGAAAAACGACCGTTCCCATGGTGGCAATGATCATAATGCGGG TCTTTTGCAGCGTCGGAGAAGACCAAAACAGAAGGTTCTTAGGGAAATGA TAGCCTTTTTTTTGTCACAACCAGACGAGTTGGTTGAGCATCAGAAACTG GACAAATCAGCACAAATGCCAGCAGGGTTTTGCTCGGCGACGCCTGTTCG ATGGCGTCGATGTACCTACCTGGGGAATACCAGTTGTTGGCAGCCATTCG TCTTGCGAAGGGTAACGGAAGGTAACTAGTAGCGGGTATTAATACTATGA GAGGACTGGGTGCGAGAGCATCGAGACGACCGTGAATAGCGGCGACTTCG ATTCGCGGGGAGCGTATTGCGCATGGGGGACGAACACCTGCCGAAGTTCA TGATGAGTGGGGAACTTGACGGAGGAACGAGGGGCAGGCGCCAACCTGCG AGGCAATGGCCACAACGTGTCATCGACGACGACGTCAATGGCTTTGGAAT CTCGACCACAATGTGGGACGCATACAAAAGTCAGTGTCGCCCACTCGTAC GGTATTGTCGAGGAAGGAGAAGCTCGTTACATGCGTGAATGGAACGCAGC CGAGGTAGCGAAGACTCATGCCCGGCACGCGTGAGAATGCTTTGCCTTTT TGCTCTTCTCTGGAGGCTGCCCACCCTGATGAATGGTGTGGCCTTGGCGC GTGTGTCTTTTGGATTGTCTTTGTATTTTGGTTTGCCTTTTTGTATTCAT TTTTCGTGTTTGTTTTCCTTGTTTTTCAGTGCTCTATTACCTTTTATTGC TACTTTTGTTGCGGTATTCTGTTACTGTTCCACCGGTTCGCCATCTATCC TGCATCCACGCGTCTGAGGGATCAGGCTAATGTGAATAATACGTAATAAA TAATACTAATTCGGTCTGCGGTCGAGGCAAGAGCGGGCATGCGTGCGAGT TTTGACGTTCTCCCCATCCCATCCTCGTCTTTCTGCGTCAAATATTGATG TCAACGATGATGTCCTGTGTGCGTACAGGGTTTGGGCCCGGCGCTATTTG GAAATGCGGTGGCGTGGGGAGGGTTCTTCTACTGCTATGAAAGATTCAAG GTAAAGGACACTACAATACAATAAAGGGTGTTATCAACCGCGCTTTGTCT GGGGTTTGTACTGAGATATCGAGAATATCGGACCGCTGCATGATCACAGT CGTGGTCATTTTTTTGCTCTCTTCTTCCGCCAGCTATTATTACTTGGATG TGTCTTAAAGGCCAAAGGCCATGTACATTCGAGATGTGTTCAGTACATGC AAGGTCTGTGTGGGAATTTCGCCCGTCGCACTTTCCAGCCGCTTGAGTGC ATGCACCACTCGCTATGGGTGAAATAATGACAGACTCCAATATTAAGTGC ATCCCGAGCATGCAAAGAGGCTAGTCAACGTGGACGAGCTAGGACTCCGC CTCGCTACTATGTAAACGTTTAATTTTGAGGCCTGTTTTTCACTGCCTCT TTTGGCGTGCCTTGTCCTTCGGATTTGGCAGGAATTTGCCCGAGGCAGGT CGATAGAAGCCGAATTGGGTCCCTTGCATCACCTCGGGGCCGGATTTATG GCAGGTGCAGCAATGGTTTTCGCCACCAACCCTGTATGGATGATAAAGAC ACGGATGCAGCTGCAAAACACCGCCGTGACCAGCGACGCCGTGCGGCCTT ACACAGGTTTTTCAGGTGCATTTTATGTTTGTTGCGACTCTGTGGCACTT TGCAGCAGGGCAAGAGTTAGGTGGTATGCGGCGGGCGAGGGGGGTATTCT GTCCTGTTGCCTATGATGGTTAGGTAGTGGTACCGGCGTAATAAAACGCG TTTAAGTAGTGCATTATCGTGTATGCTCTCACAAAATTTAGAAGCGTCGA GTTTGCTGGACCTGAAAACGGAATGAAAATGACTCAAATAGTGCAATGTT GCGTGCTTCGGTGATGATCGAGGTTCCTCTGCGACCGTGTGTGAATACAT GGAATGTGCGACAACGTGATCTCGTTTGCCCCACACTCGGCTATGTCACA GCTCGACCATATCCTGTGAGTAGATCACGAAGACAGTTTTTGCTGTCGTT TCGACCTTGAACACATATCGAGAATAAGAGATGAGCTGTTGTTGCTAAAT ACTATCAGAGAAGTCCTATTTGTTTTTACTTGAATCTCGTACCTCCGTTT TCTGTCGGTGTGTCAAACTTTTCTGGTCAACGCGAACAGATGCGGTGCGA ACGATAGTTCGTGAGGAGGGCCCGCTGGCGCTCTACAAGGGAGCAGTACC GGCGCTAATGCTTTGCACGCAGGGGGCGGTGCAGTTTACCGTGTACGAAT GGCTTAAGGCCCGGGTACCAAAGCAGAGCGAAAATGTGCGTGACGAATTG TTACTGTATTTTCTAGCACCTCGATTCCCGACCCATGGTGTACAAATTTA GGAGCAGTAATCCACGGTATTGTACGTATGTCTTCTCCCCTGTCGGGTGT TACTCGTGAGTGTGCGCTCGCAGTAAGCTGTAACGTAACTCGATGCCAAT AGTAGATCAATCAGTTGATTAGCGATCAAGTGTGAAATAAACGAGACTCG GTCGACGGCAGCATGGATCTCTCTCTCCCCCTCATTCTCTCTCGAGTGTC TGCTTTCACCGACCGTGCCCCACCTCCCCAAGAAACTTTACACCTTCAGG CTATTATTACAAACGTACACGTGATATGAGCGGGTTGATGCGAAGACTGT ACTGGAATTTCGAACGCGACCCCCCCTCAGCCGGTGGTCCTGGACAATGC TGAAGTAAAACGTGGGGTGTTGACTTGAAATAGTTTGGGATTGTGGAGGA GTTCGCCCTGCTTGACAGCGTCTTTGCTGCCTTCTTGTCTCCTCGATGCT GAGCAGACGCCGCTTGAGTCACTCGTGATGGGCGGCATTTCCAAGATTTT GTCCAGCCTGGTGACGTACCCCAGCCAGGTAAGGAGAAGCGACGAATGCG TTATTGTTTGGCGTTTGTAGGAAGAACCGAGTGCCAAATGCGCTGTGTGG CAGTGACGTGTGCATAGTCTGTTGAAATTATGTCTCATGTGTTCAGATTA GAAGATGCTTACTTGGGCACTCGATTTTCGAGAAACGGACAATTGGTTGC AAGACGACGTAGGCATTGTGTCCGTGGCTGCGAGAACACCGCCACAAAGT GTTTTCATCCATTTGACCTAAATGCGCTGTTACACACGTGCCTCAGGCTC TGTGAACGACTCCACTTCAGCTTTTGCTGTTGCCCCGTCCCCCTTCTTCT ACAAAAGTAGTCGTTGTAGTAAAAGACACACTCGGTGTGTCTACGATTGA ACAGTGTTCACTGCTGAGCGTTGAATGTTTCGCCCCCATTCCCCCCTTGC CGCTGCGCCCGCCGGCCCGTGGTGACCCATCCGCCAGGTTATCAAATCTC GCCTGCAACAGCGGGGAACACAAAGTGAGATAAGAACAAGCGTCTCTCGC TATCGCGGGGTCATACATTGCGCGACAACTATCGCTCGAAGGGAAGGCAT GCGCGGATTTTTCAAGGGCTGCGTGCCTTACGCCGTGAGGGCAGCCCCGG CCTCTGCCATCACTTTCGTAGTGTACGAGGAAGTAATGAAATTCTTGAAC TAATCGAGACAACACCGACCGACAACCTCAGGGGGAGCAAAATTAGATCA ATGAGTGTTTCTTTCCTTCTGTTGCAGAGACTGACGGGCATGCTGGAGTA GGCGCGCTATATGGCCACCATTTTGATAGTAGGACAATGAGGTGGTTGCC TCCAATTTTGACTAGTTTTGACTGTAGGTTATACTTTGGTGCAGTCCCTC CGACATCGTAAATTTGCTTGCTGCAGGGCAAGACTGATTCATGCTCATAG ACTTCGTGATCTTACGTTGCAGTTTGTTGGGTCCTCGGGAGACAACAGGT CGGCTGGAGGAATGAGAGTAGCCGTGTTGTCTCGAGTGTGTACTTTTTTT CAGATGTGTTCAGGATTATAGGGGGCTCCTCCCCTCTGTAGGGCATACAA CTAAGGTTAAGGGACAGGAGAGGGCACACCTCTTTCCATTTTGGACACTT CCCGGTACAGCAACACATGGCATGTGTAGCCGGCGCTTGAATGCCAAGAA CTCTGTCGCGTTGTCACTGTAGACCAATTGATGCTTCTCTTCTAAACGCC CATGAAATACGAGAAATAAGAGAGATCAGGCGAAGCACTGCCACACAGTA TGATGTATTCCGAAGGAGGGCCTTCTGTGCCATAAGTGGTCACAGCACGG GACGCGAACTCATTCGATTCTACTTGTGAAAGACGTCACCTTTTCTTGTC CATTTTTTGCCGA
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Coding sequence (CDS) from alignment at H-paniculata_contig2346:12417..17029-

>mRNA_H-paniculata_contig2346.6334.1 ID=mRNA_H-paniculata_contig2346.6334.1|Name=mRNA_H-paniculata_contig2346.6334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig2346:12417..17029- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAGGTGCAGCAATGGTTTTCGCCACCAACCCTGTATGGATGATAAA
GACACGGATGCAGCTGCAAAACACCGCCGTGACCAGCGACGCCGTGCGGC
CTTACACAGGTTTTTCAGATGGCAGGTGCAGCAATGGTTTTCGCCACCAA
CCCTGTATGGATGATAAAGACACGGATGCAGCTGCAAAACACCGCCGTGA
CCAGCGACGCCGTGCGGCCTTACACAGGTTTTTCAGATGCGGTGCGAACG
ATAGTTCGTGAGGAGGGCCCGCTGGCGCTCTACAAGGGAGCAGTACCGGC
GCTAATGCTTTGCACGCAGGGGGCGGTGCAGTTTACCGTGTACGAATGGC
TTAAGGCCCGGGTACCAAAGCAGAGCGAAAATATGCGGTGCGAACGATAG
TTCGTGAGGAGGGCCCGCTGGCGCTCTACAAGGGAGCAGTACCGGCGCTA
ATGCTTTGCACGCAGGGGGCGGTGCAGTTTACCGTGTACGAATGGCTTAA
GGCCCGGGTACCAAAGCAGAGCGAAAATACGCCGCTTGAGTCACTCGTGA
TGGGCGGCATTTCCAAGATTTTGTCCAGCCTGGTGACGTACCCCAGCCAG
ACGCCGCTTGAGTCACTCGTGATGGGCGGCATTTCCAAGATTTTGTCCAG
CCTGGTGACGTACCCCAGCCAGGTTATCAAATCTCGCCTGCAACAGCGGG
GAACACAAAGTGAGATAAGAACAAGCGTCTCTCGCTATCGCGGGGTCATA
CATTGCGCGACAACTATCGCTCGAAGGGAAGGCATGCGCGGATTTTTCAA
GGGCTGCGTGCCTTACGCCGTGAGGGCAGCCCCGGCCTCTGCCATCACTT
TCGTAGTGTACGAGGAAGTAATGAAATTCTTGAACTAAGTTATCAAATCT
CGCCTGCAACAGCGGGGAACACAAAGTGAGATAAGAACAAGCGTCTCTCG
CTATCGCGGGGTCATACATTGCGCGACAACTATCGCTCGAAGGGAAGGCA
TGCGCGGATTTTTCAAGGGCTGCGTGCCTTACGCCGTGAGGGCAGCCCCG
GCCTCTGCCATCACTTTCGTAGTGTACGAGGAAGTAATGAAATTCTTGAA
CTAA
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