mRNA_H-paniculata_contig23414.6323.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: D7FW29_ECTSI (Abhydrolase_5 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW29_ECTSI) HSP 1 Score: 302 bits (773), Expect = 1.610e-93 Identity = 161/278 (57.91%), Postives = 189/278 (67.99%), Query Frame = 3
Query: 780 KEWISSCRGIGWFSDPLGKPSFFRYASDFTEFLWTTLILRSTPASEAAIEASKNPATRGSGDGIVVKLTDDYVEFQLPSGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPAPNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLK-----ADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIERRI 1583
K I RG GWF+DP GKP Y D EF +LRS PA++ A EA+K+ A GDGI+VK+TDDY+EFQ G K VGVII+PGG +SPFAYS LAR+LA++GY +F+LRLPFNLA+YGW T+G IIKR QTED P P KWVL+GHS+G FT ARP+CVNGVVYMG GG K A+L LP L I GSRDPFT Q + K E IV+GGNHRGFASY +QPLDWEATI EQ RIV+E LTEFIER++
Sbjct: 39 KAMIHHARGKGWFADPRGKPPLLTYGRDLVEFAMKFTLLRSKPATDLAYEATKSVAISTQGDGIMVKMTDDYMEFQPKEG---KGDGKVGVIIVPGGLVSPFAYSILARSLAQRGYPTFVLRLPFNLAFYGWTTSGKIIKRTQTEDAPKPPTKWVLVGHSMGTLGVELFTEARPECVNGVVYMG---GGNKPTGKIANLDLPSLVIRGSRDPFTPEKDMQKAVDKWPKGTETCIVEGGNHRGFASYGRQPLDWEATISPDEQMRIVLEALTEFIERKV 310
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: A0A6H5JK92_9PHAE (Abhydrolase_5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK92_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.390e-54 Identity = 118/294 (40.14%), Postives = 160/294 (54.42%), Query Frame = 3
Query: 804 GIGWFSDPLGKPSFFRYASDFTEFLWTTLILRSTPASEAAIEASKNPAT--RGS----GDGIVVKLTDDYVEF-QLPSGGPTKRKDLV-------GVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPA-----------PNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSS--GGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIERRIVS 1589
G+G++SDPLGKPS + EF + + L ++ A+ A++ A+ RGS GDG+ V Y+EF P +D GV+I PG + P AY+PLAR +ARKGY S+ILR FNLA GW+T II R D P KWVL GHS+G F P+ V+GVVYMG + G +P + + GSRDP+ + ++ K AE+ +V+GG+HRGF SY QPLDW+ATI E EQR I+VE LT+FI+RR+ +
Sbjct: 52 GVGYYSDPLGKPSLLSHWRGLAEFTFGAITLLPKAPTDEALAAARVTASSARGSAGWEGDGVTVMDNGSYLEFLPPPEAQACGEEDTASGNDHGTGVVIFPGALVPPSAYAPLARTMARKGYPSYILRFEFNLATKGWETTSEIISRSAPAADGEERGASCSAVVSRPTKWVLAGHSMGTVGIEMFYTEHPESVDGVVYMGSGNKIGDAMKGSEVPAMVLRGSRDPYVPAEALARSAHKLPKGAEIVVVEGGSHRGFGSYKSQPLDWQATITEQEQRGIIVEALTDFIDRRVAN 345
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: D7FXM1_ECTSI (Abhydrolase_5 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM1_ECTSI) HSP 1 Score: 135 bits (339), Expect = 9.290e-31 Identity = 89/244 (36.48%), Postives = 122/244 (50.00%), Query Frame = 3
Query: 804 GIGWFSDPLGKPSFFRYASDFTEFLWTTLILRSTPASEAAIEASKNPAT---RG----SGDGIVVKLTDDYVEFQLP--------SGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPA-----------PNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLKADL----GLPMLYIFGSRDPFTLGAVSQMGSKEVM 1430
G+G++SDPLGKPS + EF + ++ L +++ A+ A++ A+ RG GDG+ V T Y+EF P + + + GV+I PG + P AY+PLAR +ARKGY S+ILR FNLA GW+ II R D P KWVL GHS+G F P+ V+GVVYMG SG + D +P + + GSRDPF V K V+
Sbjct: 52 GVGYYSDPLGKPSLLSHWRGLAEFTFGSITLLPKASTDEALAAARVTASSTARGPAGWEGDGVAVMDTGSYLEFLPPPEAQACGEADTTSGKNHRTGVVIFPGALVPPSAYAPLARTMARKGYPSYILRFEFNLATKGWEATSEIISRSAPAADGEGRGASCSAVGSRPTKWVLAGHSMGTVGIEMFYAEHPEIVDGVVYMG--SGNMIGDALKGSEVPAMVLRGSRDPFVPAEVQTARKKSVL 293
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: A0A089ZCV1_METFO (Carboxymethylenebutenolidase-like protein n=5 Tax=Methanobacterium TaxID=2160 RepID=A0A089ZCV1_METFO) HSP 1 Score: 113 bits (282), Expect = 1.980e-24 Identity = 74/254 (29.13%), Postives = 117/254 (46.06%), Query Frame = 3
Query: 828 LGKPSFFRYASDFTEFLWTTLILRSTPASEAAIEASKNPATRGSGDGIVVKLTDDYVEFQLPSGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPAPNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIE 1574
+G F Y SD+ PA A+ A S + V T D++ F P K+ G+II PGG++ +YS +A LA GY + I+R+PFNLA++G + A +I D+ P + WV++GHSLGG + P+ + GV+Y+ ++ L + GSRD T + K+ ++GGNH F +Y Q D +TI EQ+ ++ + EF++
Sbjct: 21 IGAAGFIYYVSDYY------------PADSYAL------AALNSAESYTVSNTPDFITFT-----PNTPKNSTGIIIYPGGKVQAESYSIIASKLAENGYITVIVRMPFNLAFFGSEKANTVI------DNHPEISSWVMMGHSLGGVFASDYAVNHPEKIRGVIYLASYPSANASNATFKALSLRGSRDNLTQPEDISKNLDKFPKNTLFTTIEGGNHYNFGNYGTQSGDNNSTISREEQQNQTLKAILEFLK 245
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: UPI001AEB9998 (alpha/beta hydrolase n=1 Tax=Methanobacterium aggregans TaxID=1615586 RepID=UPI001AEB9998) HSP 1 Score: 110 bits (274), Expect = 2.300e-23 Identity = 71/227 (31.28%), Postives = 104/227 (45.81%), Query Frame = 3
Query: 909 ASEAAIEASKNPATRGSGDGIVVKLTDDYVEFQLPSGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPAPNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIE 1574
A A+ A K+ T D + DY+ F PT K G+II PG +I AYS +A LA+KGY + I+++PFNLA++G D AG +I + D+ WV+ GHSLGG + D + GV+Y+ ++ L I GS D + + + GGNH F Y Q D +TI +Q+ I V+ + F+E
Sbjct: 36 ADSKALTALKSTETYSVSD------SSDYITFT-----PTTNKSTTGIIIYPGAKIQAEAYSVMASKLAQKGYTTIIVKMPFNLAFFGSDKAGAVIAKHGEIDE------WVIGGHSLGGVFASEYAMKHQDKIRGVIYLAAYPSTNASNATFKALSIRGSLDGLATAEDISKNLDKFPANTTFITIPGGNHYNFGDYGVQAGDNNSTITREKQQDITVDYIVRFVE 245
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: U6EBF3_9EURY (Carboxymethylenebutenolidase-like protein n=1 Tax=Methanobacterium sp. MB1 TaxID=1379702 RepID=U6EBF3_9EURY) HSP 1 Score: 109 bits (272), Expect = 4.240e-23 Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 3
Query: 909 ASEAAIEASKNPATRGSGDGIVVKLTDDYVEFQLPSGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPAPNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIE 1574
A+ A++A K S + V TDD++ F PT + G+II P G++ +YS ++ LA KGY + I+++PFNLA++G + A +I + P + WV++GHSLGG + + P+ + GV+Y+ ++ L + GS D FT + K+ ++GGNH F +Y Q D +TI EQ+ ++ + EF++
Sbjct: 36 ATNDALDALK------STESYKVSDTDDFITFT-----PTTTNNSTGIIIYPAGKVQAESYSIISSKLAEKGYITVIVKMPFNLAFFGTERASTVIS------NHPEISSWVMMGHSLGGVFASDYAMSHPEKIKGVIYLASYPSVNASNATFKALSLRGSLDNFTQDEDISKNLDKYPKNTLFITIEGGNHYNFGNYGVQSGDNNSTISREEQQNQTLKAILEFLK 245
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: UPI000AACA427 (alpha/beta hydrolase n=1 Tax=Methanobacterium formicicum TaxID=2162 RepID=UPI000AACA427) HSP 1 Score: 107 bits (266), Expect = 7.660e-23 Identity = 62/202 (30.69%), Postives = 101/202 (50.00%), Query Frame = 3
Query: 984 TDDYVEFQLPSGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPAPNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIE 1574
T D++ F P K+ G+II PGG++ +YS +A LA GY + I+R+PFNLA++G + A +I + P + WV++GHSLGG + P+ + GV+Y+ ++ L + GSRD T + K+ ++GGNH F +Y Q D +TI EQ+ ++ + EF++
Sbjct: 4 TPDFITFT-----PNTPKNSTGIIIYPGGKVQAESYSIIASKLAENGYITVIVRMPFNLAFFGSEKANTVIA------NHPEISSWVMVGHSLGGVFASDYAVNHPEKIRGVIYLASYPSANASNATFKALSLRGSRDNLTQPEDISKNLDKFPKNTLFTTIEGGNHYNFGNYGTQSGDNNSTITREEQQNQTLKAILEFLK 194
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: A0A2H4VMB8_9EURY (Alpha/beta hydrolase n=5 Tax=Methanobacteriales TaxID=2158 RepID=A0A2H4VMB8_9EURY) HSP 1 Score: 108 bits (270), Expect = 7.820e-23 Identity = 65/211 (30.81%), Postives = 103/211 (48.82%), Query Frame = 3
Query: 957 SGDGIVVKLTDDYVEFQLPSGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPAPNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIE 1574
S D +V+ T D++ F P + GVII PG ++ +YS +A LA GY + I+++PFNLA++G + A +IK Q + WV+ GHSLGG + PD +NGV+Y+ ++ L I GS D FTL + + ++GGNH + Y Q D +TI EQ+ ++ + +F++
Sbjct: 46 STDTYIVQNTVDFITFT-----PNSNQSTTGVIIYPGAKVQAESYSVIASQLANNGYTTIIVKMPFNLAFFGTNKADDVIKNYQEI------SSWVIGGHSLGGVFASDYAVNNPDKINGVIYLAAYPSSNASNATFKALSIRGSLDGFTLSEDISANLGKFPVNTTFITIEGGNHYNYGDYGIQAGDNNSTITREEQQNQTIKAILQFLK 245
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: UPI00064FA2BA (carboxymethylenebutenolidase n=1 Tax=Methanobacterium TaxID=2160 RepID=UPI00064FA2BA) HSP 1 Score: 107 bits (268), Expect = 1.440e-22 Identity = 76/221 (34.39%), Postives = 109/221 (49.32%), Query Frame = 3
Query: 933 SKNPATRGSGDGIVVKLTDDYVEFQLPSGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAG-VIIKRPQTEDDPPAPNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFI-VKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIE 1574
SK A S D V TD+ + F PT+ + G+I PGG++ P AYS +A LA KGY + I+++PFNLA++G + A VI K P+ N W+++GHSLGG + D + GVVY+ ++ L I GS D T A +K VFI + GGNH +Y Q D +TI EQ+ +V + EF++
Sbjct: 38 SKAEAALKSTDVYNVTDTDNSITFT-----PTQNRSTTGIIFYPGGKVQPEAYSVIASKLAAKGYTTIIVKMPFNLAFFGVNGADDVIAKHPEI-------NSWIIMGHSLGGVFASEYAVNHQDKIKGVVYLAAYPSTNASNATFKALSIRGSLDNLTT-AQDISNNKNKFPANTVFITIPGGNHYNNGNYGPQAGDNNSTITREEQQNKIVGHILEFLK 245
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Match: A0A1D3L0M8_9EURY (Carboxymethylenebutenolidase-related protein n=1 Tax=Methanobacterium congolense TaxID=118062 RepID=A0A1D3L0M8_9EURY) HSP 1 Score: 107 bits (267), Expect = 1.960e-22 Identity = 68/211 (32.23%), Postives = 102/211 (48.34%), Query Frame = 3
Query: 957 SGDGIVVKLTDDYVEFQLPSGGPTKRKDLVGVIIIPGGQISPFAYSPLARALARKGYASFILRLPFNLAYYGWDTAGVIIKRPQTEDDPPAPNKWVLIGHSLGG-----FTNARPDCVNGVVYMGCSSGGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGGNHRGFASYDKQPLDWEATIDESEQRRIVVEVLTEFIE 1574
S D +V T D++ F PT K G+II PG ++ AYS LA LA+ GY + I+++PFNLA++G D A +I + TE NKWV+ GHSLGG + D ++GV+Y+ ++ L I GS D T + + + GGNH F Y Q D +TI +Q+ + V+ + F++
Sbjct: 46 STDTYIVSDTADFITFT-----PTTNKSTTGIIIYPGAKVQAEAYSVLASKLAQNGYTTIIVKMPFNLAFFGTDKADEVIAQ-HTEI-----NKWVIGGHSLGGVFASEYALKNQDKISGVIYLAAYPSTNASNATFKALSIRGSLDGLTTVEDISKNLDKFPANTTFITLHGGNHYNFGDYGVQAGDNNSTITREKQQNLTVDYIVRFVK 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23414.6323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23414.6323.1 >prot_H-paniculata_contig23414.6323.1 ID=prot_H-paniculata_contig23414.6323.1|Name=mRNA_H-paniculata_contig23414.6323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp MGCSSGGLKADLGLPMLYIFGSRDPFTLGAVSQMGSKEVMKDAEVFIVKGback to top mRNA from alignment at H-paniculata_contig23414:2..3981+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23414.6323.1 ID=mRNA_H-paniculata_contig23414.6323.1|Name=mRNA_H-paniculata_contig23414.6323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3980bp|location=Sequence derived from alignment at H-paniculata_contig23414:2..3981+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23414:2..3981+ >mRNA_H-paniculata_contig23414.6323.1 ID=mRNA_H-paniculata_contig23414.6323.1|Name=mRNA_H-paniculata_contig23414.6323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at H-paniculata_contig23414:2..3981+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |