mRNA_H-paniculata_contig23206.6248.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig23206.6248.1
Unique NamemRNA_H-paniculata_contig23206.6248.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D8LDH2_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH2_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 4.610e-120
Identity = 182/331 (54.98%), Postives = 229/331 (69.18%), Query Frame = 1
Query:    1 MVRMKLGLYPSTHNVADGEVCHLPMNEHPTEDVDRVARHCTG--NACTMFATGTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRVLPIRFSHPKMDTEV 987
            MVRMKLGLY S HNV D EV +  ++      + R + H     N C++ ++G C Q DITC  L GN IDW+CVFG  SL EV  RGG  T+C   +K+EPCSRFIV ++KER+EV VQ+G  GF F  GE YIF YSF+AK+GMKV+   +  GQ+KG   G+ + G+P++S+TAN+ G+ VRF+N ES  D  +GM   L WEDATG+WV+V+I T FGKSMEV  SGAVEGKAVWPS  KPVAWN+  D +  KLGLYH  N VAD EVEYKNI I+GP G IRTS+ GVK+ G PEGV YLGC++D+  DR+L   +    + TE+
Sbjct:   89 MVRMKLGLYHSIHNVHDQEVIYQDISIEGPNGIIRTSPHVDDPTNTCSVDSSGQCQQTDITCTALSGNTIDWECVFGYGSLVEVEARGGTLTSCSAGTKVEPCSRFIVPEDKERAEVLVQQGVGGFQFAKGETYIFKYSFKAKDGMKVSGSSSRLGQMKGVSGGFQLLGNPLFSVTANNDGINVRFNNDES--DIVEGMDEFLSWEDATGEWVNVEIQTTFGKSMEVHFSGAVEGKAVWPSSYKPVAWNNDADTMMFKLGLYHIRNKVADAEVEYKNISIQGPAGTIRTSALGVKNHGSPEGVMYLGCVKDSRDDRLLDSVYRSSDLTTEM 417          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5KQZ0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ0_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 3.450e-112
Identity = 172/253 (67.98%), Postives = 197/253 (77.87%), Query Frame = 1
Query:  151 GTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCS---------------RFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTS 864
            G C  ++I C+ LQ  QIDWDCVFGP+SLEEV QRGG FTTCP A+K  PCS               RFIV+K++ERSEVKVQEGP+GFPFL+GE+YIF YSF+A E M+VA RFTH GQLKGS  GYM+ GDPIYSLTAN HGL VRFSN ESI+DY DG+   LDW+ ATG+WVHV+I T FG+SMEV ISGAV G AVWPS LKPVAW+   +MVRMKLGLYHS +NVAD EV Y++I IEGPNGIIRTS
Sbjct:  127 GNCKPINIVCDALQDYQIDWDCVFGPESLEEVFQRGGDFTTCPGATKAHPCSSLLPILSDPLSTMNVRFIVDKDEERSEVKVQEGPEGFPFLYGEEYIFKYSFQAIEDMQVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGQSMEVNISGAVSGTAVWPSDLKPVAWHRDSEMVRMKLGLYHSIHNVADQEVIYQDISIEGPNGIIRTS 379          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D8LDH3_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH3_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 3.080e-106
Identity = 160/302 (52.98%), Postives = 201/302 (66.56%), Query Frame = 1
Query:   43 VADGEVCHLPMNEHPTEDVDRVARHCTGNACTMFATGTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRVL 948
            V D EV +  ++      + R +        T    G+C +   TC P  G+ IDW+C+FG  SL EV  RGG   +C   +  EPCSRFIV KE+ER+EV  Q+G  GF F  GE YIF YSFRAK+GMKV+   T  GQ+KG   G+ + G+P++S+TAN++G+ VRF+N+ES  D  +GM   L WEDATG+WVHV+I T FGKSMEV  SGAVEGKAVWPS  KPVAWN   D +  KLGLYH  N VADGEVEYKNI I+GPNG++RTSS G  D G P+G+  LGC++D   DR+L
Sbjct:    7 VHDQEVIYQDISIEGPNGIIRTSPTSDPPIDTCLTLGSCPKSGTTCPPSSGSTIDWNCMFGAGSLVEVQARGGTLVSCSSGTDAEPCSRFIVPKEQERAEVLAQKGVGGFQFAKGEAYIFKYSFRAKDGMKVSGSSTRIGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEES--DKVEGMDDTLSWEDATGEWVHVEIRTTFGKSMEVYFSGAVEGKAVWPSSYKPVAWNDDADTIMFKLGLYHIKNKVADGEVEYKNISIQGPNGLLRTSSVGDSDHGPPQGIMSLGCVKDADHDRLL 306          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D7G946_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G946_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 2.080e-105
Identity = 157/222 (70.72%), Postives = 180/222 (81.08%), Query Frame = 1
Query:  187 LQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHST-NNVADGEV---EYKNIWIEG 840
            L+  QIDWDCVFGP+SLEEV QRGG FTTCP A+K  PCSRFIV+K++ERSEVKVQEGP+GFPFL+GE+YIF YSF+A E M+VA RFTH GQLKGS  GYMV GDPIYSLTAN HGL VRFSN ESI+DY DG+   LDW+ ATG+WVHV+I T FG+SMEV ISGAV GKAVWPS LKPVAW+   +MVRMKLGLYHS  NNV  G +    +  IW++G
Sbjct:  111 LKDYQIDWDCVFGPESLEEVFQRGGDFTTCPGATKAHPCSRFIVDKDEERSEVKVQEGPEGFPFLYGEEYIFKYSFQAIEDMQVATRFTHLGQLKGSAGGYMVKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGQSMEVNISGAVSGKAVWPSDLKPVAWHRDSEMVRMKLGLYHSIHNNVVFGCLWSGVHVYIWVDG 332          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5JXY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY2_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 1.170e-100
Identity = 169/363 (46.56%), Postives = 213/363 (58.68%), Query Frame = 1
Query:    1 MVRMKLGLYPSTHNVADGEVCHLPMNEHPTEDVDRVARHCTGNACTMFATGTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHG-----------------------------------------------EKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRVL 948
            MVRMKLGLY S HNV D EV +  ++      + R +     +  +    G+C     TC P  G+ IDW+C+FG  SL EV  RGG   +CP  +  EPCSRFIV KEKER+EV  Q+G  GF F  G                                               E YIF YSFRAK+GMKV+   T  GQ+KG   G+ + G+P++S+TAN++G+ VRF+N++   D  +GM   L WEDATG+WVHV+I T FGKSMEV  SGAV+GKAVWPS  KPVAW+   D +  KLGLYH  N VADGEVEYKNI I+GPNG++RTSS G  + G P+G+T LGC +D   DR+L
Sbjct:  167 MVRMKLGLYHSIHNVHDQEVIYQDISIEGPNGIIRTSPPSDIHIHSCSTFGSCSVSGTTCPPSSGSTIDWNCMFGVGSLAEVEARGGKLVSCPSGTDAEPCSRFIVPKEKERAEVLAQKGVGGFQFAKGRNGWPSVMGLVPKNVPSSRGRVVNGLTAKACITKRVRPPGFLPHPKGETYIFKYSFRAKDGMKVSGSSTRLGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEDD--DNVEGMDEFLSWEDATGEWVHVEIQTTFGKSMEVYFSGAVKGKAVWPSSYKPVAWSDDADTIMFKLGLYHIKNKVADGEVEYKNISIQGPNGLLRTSSVGDINHGPPQGITSLGCAKDARHDRLL 527          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5KAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW5_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 2.860e-100
Identity = 154/278 (55.40%), Postives = 198/278 (71.22%), Query Frame = 1
Query:  133 CTMFATGTCVQ--VDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGS-----KNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRV 945
            C++  T T V   +DITC+  + N IDWDCVFGP SL+EV+++GG  T C    +  PCS F+V+K++ERSE KV EGP+GF +  GEKYI  YSFRA+EGM+V+ ++TH GQLKG+       G M+  DPIY LTAN  GLMVRFSN+E   ++ +G+S  L+W+D+TG+WVHVKI T FG+ M V +SGAVEG+AVWPS+LKPVAW+   D VRMKLGLYH  + V DG+VEY++I IEGPNGIIRTS +        EG  Y+GC  D+  D V
Sbjct:    6 CSLAGTRTLVHGAIDITCDAEKDNHIDWDCVFGPGSLDEVNKKGGYMTKC-SGKRHYPCSLFVVKKDEERSETKVNEGPEGFDYYKGEKYIIKYSFRAEEGMRVSSKYTHLGQLKGTIGKGKVKGTMIKLDPIYCLTANKDGLMVRFSNREMPDNFHEGLSKHLNWKDSTGQWVHVKIVTTFGEFMVVRLSGAVEGRAVWPSNLKPVAWHRDADRVRMKLGLYHKIDQVYDGKVEYRDISIEGPNGIIRTSPEPDH-----EGHLYVGCFADDDDDHV 277          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5JBB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB3_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 1.190e-92
Identity = 165/354 (46.61%), Postives = 209/354 (59.04%), Query Frame = 1
Query:    1 MVRMKLGLYPSTHNVADGEVCHLPMNEHPTEDVDRVARHCTGNACTMFATGTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSME-VEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYH------------------------------STNN-------VADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRVL 948
            MVRMKLGLY S HNV D EV +  ++      + R +     +       G+C +   TC P  G+ IDW+C+FG  SL EV  RGG   +CP  +  EPCSRFIV KEKER+E   Q+G  GF F  GE YIF YSFRAK+GMKV+   T  GQ+KG   G+ + G+P++S+TAN++G+ VRF+N++   D  +GM   L WEDATG+WVHV+I T FG+    V  SGAV GKAVWP   KPVAWN   D +  KLGLYH                              ST N       VADGEVEYKNI I+GPNG++RTSS G  +   P+G+T LGC++D   DR+L
Sbjct:  275 MVRMKLGLYHSIHNVHDQEVIYRDISIEGPNGIIRTSPPSDIHIHPCRTFGSCPRSVTTCPPSSGSTIDWNCMFGVGSLVEVEARGGKLVSCPSGTDAEPCSRFIVPKEKERAEA--QKGVGGFQFAKGETYIFKYSFRAKDGMKVSGSSTRLGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEDD--DNVEGMDEFLSWEDATGEWVHVEIQTTFGEVHGGVYFSGAVNGKAVWPPSYKPVAWNDDADTIMFKLGLYHIKNKVGRLEIPVRALETNSASSSLDGRSSPSTTNRSIPPPKVADGEVEYKNISIQGPNGLLRTSSVGDINHRPPQGITSLGCVKDARHDRLL 624          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D8LDJ9_ECTSI (Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ9_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 1.250e-90
Identity = 150/288 (52.08%), Postives = 184/288 (63.89%), Query Frame = 1
Query:  163 QVDITCEPLQGNQIDWDCVFGPDSLEEV-------HQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNG-YMVSGDPIYSLTANHHGLMVRFSN-KESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPE----GVTYLGCIRDNPADRVLPIRFSHPKMDTEV 987
            ++DITC+P + N IDWDC+FG DS EEV        +     T+C    K  PCSRFIV K  +R+E KV  GP+GFPFL GE+YI+ YSFRA EGMK+ KRFTH GQ+KG+ NG   V GDPI S++AN  GL VRFSN  ++I DY    S   +W+DATG+WVHV I TVFG+SMEV+ +G V GK VWP    PVAWN+ G M RMKLGLYH    V DGEVE +++ IEGPNGIIRTS +        E    G  YLGC  D    R+   ++    M T +
Sbjct:   44 KIDITCKPKKDNVIDWDCIFGEDSEEEVLKYRSKDKKERATHTSC--TDKDRPCSRFIVPKNVQRAETKVAYGPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWKDATGEWVHVTIDTVFGESMEVKFAGGVSGKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVGDGEVEIRDVSIEGPNGIIRTSPEESPSPSSKENDSKGHLYLGCFEDEKDKRIFGKKYVDAHMTTAI 329          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5K5S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5S3_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 1.680e-83
Identity = 150/305 (49.18%), Postives = 177/305 (58.03%), Query Frame = 1
Query:   67 LPMNEHPTEDVDRVARHCTGNACTMFATGTCVQVDITCEPLQGNQIDWDCVF------------------------------GPDSLEEV-------HQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNG-YMVSGDPIYSLTANHHGLMVRFSN-KESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTS 864
            LP       DV    R C     +MF      ++DITCEP + N IDWDC+F                              G DS EEV        +     T+C    K  PCSRFIV K  +R+E KV  GP+GFPFL GE+YI+ YSFRA EGMK+ KRFTH GQ+KG+ NG   V GDPI S++AN  GL VRFSN  ++I DY    S   +WEDATG+WVHV I TVFG+ MEVE +G V GK VWP    PVAWN+ G M RMKLGLYH    V DGEVE +++ IEGPNGIIRTS
Sbjct:   21 LPPLRSVVRDVIVKNRCCNPRVSSMFNREA--RIDITCEPKKDNVIDWDCIFVSVKLVAVPLINVLRTNTRSSSPPRFDLLKGEDSEEEVLKYRSKDKKERATHTSC--TDKDRPCSRFIVPKNVQRAETKVAYGPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWEDATGEWVHVTIDTVFGEFMEVEFAGGVSGKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVGDGEVEIRDVSIEGPNGIIRTS 321          
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D7FK18_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK18_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 4.320e-26
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 1
Query:  598 ALDWEDATGKWVHVKITTVFGKSM--EVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRV 945
            A+D      K  H+    VFG     EV +SGAVEG+AVWPS+LKPVAW+   D VRMKLGLYH T+ V DG+VEY++I IEGPNGIIRTS +        EG  Y+GC  D+  D V
Sbjct:   18 AIDITCDAEKGNHIDWDGVFGPGSLDEVRLSGAVEGRAVWPSNLKPVAWHRDADRVRMKLGLYHKTDQVYDGKVEYRDISIEGPNGIIRTSPEPDH-----EGHLYVGCFADDDDDHV 130          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LDH2_ECTSI4.610e-12054.98WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KQZ0_9PHAE3.450e-11267.98WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LDH3_ECTSI3.080e-10652.98WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G946_ECTSI2.080e-10570.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXY2_9PHAE1.170e-10046.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAW5_9PHAE2.860e-10055.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBB3_9PHAE1.190e-9246.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDJ9_ECTSI1.250e-9052.08Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5K5S3_9PHAE1.680e-8349.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK18_ECTSI4.320e-2653.39WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23206contigH-paniculata_contig23206:680..3757 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.2
Seed ortholog evalue3.3e-98
Seed eggNOG ortholog2880.D8LDH2
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.2.1.37
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size987
Cds size987
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929656.2738292-CDS-H-paniculata_contig23206:679..8561622929656.2738292-CDS-H-paniculata_contig23206:679..856Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 680..856 -
1691480953.816363-CDS-H-paniculata_contig23206:679..8561691480953.816363-CDS-H-paniculata_contig23206:679..856Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 680..856 -
1622929656.287837-CDS-H-paniculata_contig23206:1093..12311622929656.287837-CDS-H-paniculata_contig23206:1093..1231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 1094..1231 -
1691480953.8296351-CDS-H-paniculata_contig23206:1093..12311691480953.8296351-CDS-H-paniculata_contig23206:1093..1231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 1094..1231 -
1622929656.2988913-CDS-H-paniculata_contig23206:1538..17751622929656.2988913-CDS-H-paniculata_contig23206:1538..1775Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 1539..1775 -
1691480953.83942-CDS-H-paniculata_contig23206:1538..17751691480953.83942-CDS-H-paniculata_contig23206:1538..1775Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 1539..1775 -
1622929656.3141694-CDS-H-paniculata_contig23206:2241..23681622929656.3141694-CDS-H-paniculata_contig23206:2241..2368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 2242..2368 -
1691480953.848763-CDS-H-paniculata_contig23206:2241..23681691480953.848763-CDS-H-paniculata_contig23206:2241..2368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 2242..2368 -
1622929656.3290617-CDS-H-paniculata_contig23206:2736..28941622929656.3290617-CDS-H-paniculata_contig23206:2736..2894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 2737..2894 -
1691480953.857952-CDS-H-paniculata_contig23206:2736..28941691480953.857952-CDS-H-paniculata_contig23206:2736..2894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 2737..2894 -
1622929656.3407962-CDS-H-paniculata_contig23206:3112..31811622929656.3407962-CDS-H-paniculata_contig23206:3112..3181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 3113..3181 -
1691480953.8669496-CDS-H-paniculata_contig23206:3112..31811691480953.8669496-CDS-H-paniculata_contig23206:3112..3181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 3113..3181 -
1622929656.3562233-CDS-H-paniculata_contig23206:3676..37571622929656.3562233-CDS-H-paniculata_contig23206:3676..3757Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 3677..3757 -
1691480953.8759096-CDS-H-paniculata_contig23206:3676..37571691480953.8759096-CDS-H-paniculata_contig23206:3676..3757Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig23206 3677..3757 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23206.6248.1prot_H-paniculata_contig23206.6248.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig23206 680..3757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig23206.6248.1

>prot_H-paniculata_contig23206.6248.1 ID=prot_H-paniculata_contig23206.6248.1|Name=mRNA_H-paniculata_contig23206.6248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp
MVRMKLGLYPSTHNVADGEVCHLPMNEHPTEDVDRVARHCTGNACTMFAT
GTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEP
CSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRF
THFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTA
LDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAG
DMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEG
VTYLGCIRDNPADRVLPIRFSHPKMDTEV
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mRNA from alignment at H-paniculata_contig23206:680..3757-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig23206.6248.1 ID=mRNA_H-paniculata_contig23206.6248.1|Name=mRNA_H-paniculata_contig23206.6248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3078bp|location=Sequence derived from alignment at H-paniculata_contig23206:680..3757- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTCGCATGAAGCTGGGTCTCTACCCCTCTACCCATAACGTGGCAGA CGGGGAGGTGTGTCATCTACCCATGAATGAAGTTGGGGTTTTGATAAGCG AGTTAGATTAATTTCCTAGGTTAATATTTACGGAGAGCAGGGACCAAGGT GTACGACAGGGTACCTGTATAGTGAGATCTTCGATACATGCCGTATGCGG GGATATCAGTCCCTGATGCTCCAAGGGCGTGTAAGAGCTGTCTACAAAAA CAGCGGGCATGACACCCAGTAAAGGTTTTCCATCCTAGGTCTTGCGAGTA ACATGAGCGCGAATCTGACGCGGTGTGTACGGGGATCGGTCATCTGCGGT TGCTCCACGCGAGCTGGAACCTTCATACATACCCCATATCTGCGTTCGCC TCATCCATTCAGGTGGAGTACAAGAATATTTCTATCGACTAGCCCGCCAC GGGGAGAGGACGACGACAGTTTCGAGAAACCTCAACAGTGCACTATCGAC AGTGAGACGGTGAGAGTGCGAGAACAGCCGACCAGTGTTTGGGTGTCGTG ATGAAATTCCGGAGGTGGAGTAAAAGCACCCAACAGAAGACGTCGATAGA GTCGCGCGGCATTGCACGGGAAACGCGTGTACAATGTTTGCGACTGTCTA TGGTACGTGCCGTATAGTTGACACCGTACCATTGGGTCGGAATACAGCGT AGGTTAAGGGACAGAGCAGTTCCGATTATCGAGGAGAACCAATCCTTTGA TAACTCTGTATCGCAATATCGCACAAGGTATACCAGCTGTTCTGGCTTCC GCATAAACTCATCGACGTTTCGGCCTGCTCCATGCTCCTTTCGTTCCTGC TACCATGCCAAAGGGGACGTGCGTGCAAGTGGACATCACGTGCGAGCCCC TCCAGGGCAACCAGATCGACTGGGATTGTGTGTTCGGCCCAGACTCTCTG GAGGAGGTCCACCAGAGAGGAGGCCTATTCACTACTTGTCCCAAAGCCAG CAAGCTGGAGCCATGTTCCAGGTACACTCAGCATTCCTGGATCTCCATCT TTGGTTCGAAATGATGCGACTTATGACTGATAAGGGTCCTTGAGAGCATT CCTTCCGCTTTGCGGAAATACTGAAGAGGCGCGGAAGCCTTTTCCAAAAG GGATTTGCGTATCACTGAAACCACGCGCAACGCCATCCCGTGCATCACCA AGTGGTATGCACGGAAAGCCTCAAACTGAGCCGGATAATTGAAACAAGTC AAATTTCCTGCTTGAGGCATTTAGGATCGTTCATTCATTATCACCCTTTT ATGCCACCGCACTCTCACTGACAGTGATGACGCTCAAACTTCGATATCCC CGCTCTATCGATGAACTCGCCGAACACTACATGCAACAGGTTTATTGTGG AAAAGGAAAAGGAAAGGTCTGAGGTCAAGGTCCAGGAGGGTCCCGACGGC TTCCCTTTCCTCCACGGCGAGAAGTACATCTTCGGATACAGCTTCCGGGC TAAAGAGGGTATGAAGGTGAGCTTGGGACTTAATGCCGGCCCGCGTTGAG ATACAGGACGACCATTGCCCTTTTTGTACGTTTCAATTTAAAAAACATCC AACAAAGCGTTGAACGATAAAATCGCGCGAAACGTGTCTTGCCATGATGA ATGGAGCCACCATGAGGCCACGGACGTCGTTGCACTTGGAGAATTATAGG CAAGCAAGAAATCTATTTGACAGCATCACGATACAATCGCAACGACTTCC CTCTTTATCAAAATATCAACGTGGTAACGAGAGAGCGGCTTGCCGACCAT AACCAGTTCGGGGGAGAGCATGTATTGTCACGTACTAACATGTGCATGTT TCGCTCTCCACACCATGTCTCTGTATCCGAGCTCGTTCTGGGACTGCACT CGTCAAGATTGGTTCTTACATCCAGGCCTCTTCTTCCGGATGCCGTGTGC CGCTGTCAATTGTGTGTTTAACGGCGCGCCAGGTGGCTAAGAGGTTCACC CACTTTGGCCAGCTCAAGGGATCAAAGAACGGCTACATGGTGAGCGGCGA TCCCATATATTCCCTCACAGCTAACCACCATGGGCTCATGGTTCGTTTCA GCAACAAGGAATCCATCAAAGATTACGCCGACGGGATGTCCACCGCATTA GATTGGGAAGATGCTACCGGGAAATGGGTGCATGTCAAGATCACCACTGT CTTCGGGAAGTCAATGGAGGTACCATAGCATAGTCGTGGGCGATAGGAAC ATGGTATGAAGGGGCAACTCAAGCGGGGCGAAGCTTGCTGTGTGTCACGT CAAACATGGTACTGTAGTTTGATTTGCACCACAACTCAGTCAGAGTAAAA TATTCGCCTGGGCATATAGTCTCACAACTGCGTCATGTCAGTGCCCCCGT AGACTTTCCGAAAGTACAGAAAATTGGCTTCTTCAGGTGATGCTTCTGCG GAGTATTAACTTCAGTTAGATTGGTAGCCTTAGTTTCCCATGCCTCTGCT GCGCTCGTTCCATTTGTTGACGACAGGTGGAAATCTCCGGAGCGGTTGAG GGTAAGGCGGTATGGCCATCTCACCTCAAGCCAGTGGCCTGGAATAGTGC AGGTGACATGGTCCGCATGAAGCTCGGCCTCTACCACTCCACCAACAACG TGGCCGACGGGGAAGTGAGTCACCTTGACAGCGATCAATATTGGGGGGTT GAAATTGCTTTAGTACGTGAACGATACATTCCCGTTAACTAGGCGATGGG GGGAAAGAGAGGAAACTATATTTGAAGGGCGGACAAGCATCAAGTGCCCG GACAAGAATAACGTTACAATGACACTAAAGCCTCTTCACTAGGAACGAGT ATATTGATACGAGTGTTTTCCCGGCTCCATATCGCTCGGTCGATTCCTCA GGTGGAATACAAGAACATCTGGATTGAAGGGCCTAATGGTATCATTCGCA CAAGCTCCAAGGGCGTCAAGGACACCGGTATCCCGGAGGGGGTTACATAC TTGGGGTGCATTAGAGACAATCCTGCCGATCGGGTGTTGCCCATTAGGTT CAGTCACCCCAAAATGGACACTGAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig23206:680..3757-

>mRNA_H-paniculata_contig23206.6248.1 ID=mRNA_H-paniculata_contig23206.6248.1|Name=mRNA_H-paniculata_contig23206.6248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at H-paniculata_contig23206:680..3757- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTCGCATGAAGCTGGGTCTCTACCCCTCTACCCATAACGTGGCAGA
CGGGGAGGTGTGTCATCTACCCATGAATGAAATGGTTCGCATGAAGCTGG
GTCTCTACCCCTCTACCCATAACGTGGCAGACGGGGAGGTGTGTCATCTA
CCCATGAATGAACACCCAACAGAAGACGTCGATAGAGTCGCGCGGCATTG
CACGGGAAACGCGTGTACAATGTTTGCGACTCACCCAACAGAAGACGTCG
ATAGAGTCGCGCGGCATTGCACGGGAAACGCGTGTACAATGTTTGCGACT
GGGACGTGCGTGCAAGTGGACATCACGTGCGAGCCCCTCCAGGGCAACCA
GATCGACTGGGATTGTGTGTTCGGCCCAGACTCTCTGGAGGAGGTCCACC
AGAGAGGAGGCCTATTCACTACTTGTCCCAAAGCCAGCAAGCTGGAGCCA
TGTTCCAGGGGACGTGCGTGCAAGTGGACATCACGTGCGAGCCCCTCCAG
GGCAACCAGATCGACTGGGATTGTGTGTTCGGCCCAGACTCTCTGGAGGA
GGTCCACCAGAGAGGAGGCCTATTCACTACTTGTCCCAAAGCCAGCAAGC
TGGAGCCATGTTCCAGGTTTATTGTGGAAAAGGAAAAGGAAAGGTCTGAG
GTCAAGGTCCAGGAGGGTCCCGACGGCTTCCCTTTCCTCCACGGCGAGAA
GTACATCTTCGGATACAGCTTCCGGGCTAAAGAGGGTATGAAGGTTTATT
GTGGAAAAGGAAAAGGAAAGGTCTGAGGTCAAGGTCCAGGAGGGTCCCGA
CGGCTTCCCTTTCCTCCACGGCGAGAAGTACATCTTCGGATACAGCTTCC
GGGCTAAAGAGGGTATGAAGGTGGCTAAGAGGTTCACCCACTTTGGCCAG
CTCAAGGGATCAAAGAACGGCTACATGGTGAGCGGCGATCCCATATATTC
CCTCACAGCTAACCACCATGGGCTCATGGTTCGTTTCAGCAACAAGGAAT
CCATCAAAGATTACGCCGACGGGATGTCCACCGCATTAGATTGGGAAGAT
GCTACCGGGAAATGGGTGCATGTCAAGATCACCACTGTCTTCGGGAAGTC
AATGGAGGTGGCTAAGAGGTTCACCCACTTTGGCCAGCTCAAGGGATCAA
AGAACGGCTACATGGTGAGCGGCGATCCCATATATTCCCTCACAGCTAAC
CACCATGGGCTCATGGTTCGTTTCAGCAACAAGGAATCCATCAAAGATTA
CGCCGACGGGATGTCCACCGCATTAGATTGGGAAGATGCTACCGGGAAAT
GGGTGCATGTCAAGATCACCACTGTCTTCGGGAAGTCAATGGAGGTGGAA
ATCTCCGGAGCGGTTGAGGGTAAGGCGGTATGGCCATCTCACCTCAAGCC
AGTGGCCTGGAATAGTGCAGGTGACATGGTCCGCATGAAGCTCGGCCTCT
ACCACTCCACCAACAACGTGGCCGACGGGGAAGTGGAAATCTCCGGAGCG
GTTGAGGGTAAGGCGGTATGGCCATCTCACCTCAAGCCAGTGGCCTGGAA
TAGTGCAGGTGACATGGTCCGCATGAAGCTCGGCCTCTACCACTCCACCA
ACAACGTGGCCGACGGGGAAGTGGAATACAAGAACATCTGGATTGAAGGG
CCTAATGGTATCATTCGCACAAGCTCCAAGGGCGTCAAGGACACCGGTAT
CCCGGAGGGGGTTACATACTTGGGGTGCATTAGAGACAATCCTGCCGATC
GGGTGTTGCCCATTAGGTTCAGTCACCCCAAAATGGACACTGAGGTGGTG
GAATACAAGAACATCTGGATTGAAGGGCCTAATGGTATCATTCGCACAAG
CTCCAAGGGCGTCAAGGACACCGGTATCCCGGAGGGGGTTACATACTTGG
GGTGCATTAGAGACAATCCTGCCGATCGGGTGTTGCCCATTAGGTTCAGT
CACCCCAAAATGGACACTGAGGTG
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