mRNA_H-paniculata_contig23206.6248.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D8LDH2_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH2_ECTSI) HSP 1 Score: 366 bits (939), Expect = 4.610e-120 Identity = 182/331 (54.98%), Postives = 229/331 (69.18%), Query Frame = 1
Query: 1 MVRMKLGLYPSTHNVADGEVCHLPMNEHPTEDVDRVARHCTG--NACTMFATGTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRVLPIRFSHPKMDTEV 987
MVRMKLGLY S HNV D EV + ++ + R + H N C++ ++G C Q DITC L GN IDW+CVFG SL EV RGG T+C +K+EPCSRFIV ++KER+EV VQ+G GF F GE YIF YSF+AK+GMKV+ + GQ+KG G+ + G+P++S+TAN+ G+ VRF+N ES D +GM L WEDATG+WV+V+I T FGKSMEV SGAVEGKAVWPS KPVAWN+ D + KLGLYH N VAD EVEYKNI I+GP G IRTS+ GVK+ G PEGV YLGC++D+ DR+L + + TE+
Sbjct: 89 MVRMKLGLYHSIHNVHDQEVIYQDISIEGPNGIIRTSPHVDDPTNTCSVDSSGQCQQTDITCTALSGNTIDWECVFGYGSLVEVEARGGTLTSCSAGTKVEPCSRFIVPEDKERAEVLVQQGVGGFQFAKGETYIFKYSFKAKDGMKVSGSSSRLGQMKGVSGGFQLLGNPLFSVTANNDGINVRFNNDES--DIVEGMDEFLSWEDATGEWVNVEIQTTFGKSMEVHFSGAVEGKAVWPSSYKPVAWNNDADTMMFKLGLYHIRNKVADAEVEYKNISIQGPAGTIRTSALGVKNHGSPEGVMYLGCVKDSRDDRLLDSVYRSSDLTTEM 417
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5KQZ0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ0_9PHAE) HSP 1 Score: 352 bits (903), Expect = 3.450e-112 Identity = 172/253 (67.98%), Postives = 197/253 (77.87%), Query Frame = 1
Query: 151 GTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCS---------------RFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTS 864
G C ++I C+ LQ QIDWDCVFGP+SLEEV QRGG FTTCP A+K PCS RFIV+K++ERSEVKVQEGP+GFPFL+GE+YIF YSF+A E M+VA RFTH GQLKGS GYM+ GDPIYSLTAN HGL VRFSN ESI+DY DG+ LDW+ ATG+WVHV+I T FG+SMEV ISGAV G AVWPS LKPVAW+ +MVRMKLGLYHS +NVAD EV Y++I IEGPNGIIRTS
Sbjct: 127 GNCKPINIVCDALQDYQIDWDCVFGPESLEEVFQRGGDFTTCPGATKAHPCSSLLPILSDPLSTMNVRFIVDKDEERSEVKVQEGPEGFPFLYGEEYIFKYSFQAIEDMQVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGQSMEVNISGAVSGTAVWPSDLKPVAWHRDSEMVRMKLGLYHSIHNVADQEVIYQDISIEGPNGIIRTS 379
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D8LDH3_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH3_ECTSI) HSP 1 Score: 326 bits (836), Expect = 3.080e-106 Identity = 160/302 (52.98%), Postives = 201/302 (66.56%), Query Frame = 1
Query: 43 VADGEVCHLPMNEHPTEDVDRVARHCTGNACTMFATGTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRVL 948
V D EV + ++ + R + T G+C + TC P G+ IDW+C+FG SL EV RGG +C + EPCSRFIV KE+ER+EV Q+G GF F GE YIF YSFRAK+GMKV+ T GQ+KG G+ + G+P++S+TAN++G+ VRF+N+ES D +GM L WEDATG+WVHV+I T FGKSMEV SGAVEGKAVWPS KPVAWN D + KLGLYH N VADGEVEYKNI I+GPNG++RTSS G D G P+G+ LGC++D DR+L
Sbjct: 7 VHDQEVIYQDISIEGPNGIIRTSPTSDPPIDTCLTLGSCPKSGTTCPPSSGSTIDWNCMFGAGSLVEVQARGGTLVSCSSGTDAEPCSRFIVPKEQERAEVLAQKGVGGFQFAKGEAYIFKYSFRAKDGMKVSGSSTRIGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEES--DKVEGMDDTLSWEDATGEWVHVEIRTTFGKSMEVYFSGAVEGKAVWPSSYKPVAWNDDADTIMFKLGLYHIKNKVADGEVEYKNISIQGPNGLLRTSSVGDSDHGPPQGIMSLGCVKDADHDRLL 306
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D7G946_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G946_ECTSI) HSP 1 Score: 323 bits (827), Expect = 2.080e-105 Identity = 157/222 (70.72%), Postives = 180/222 (81.08%), Query Frame = 1
Query: 187 LQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHST-NNVADGEV---EYKNIWIEG 840
L+ QIDWDCVFGP+SLEEV QRGG FTTCP A+K PCSRFIV+K++ERSEVKVQEGP+GFPFL+GE+YIF YSF+A E M+VA RFTH GQLKGS GYMV GDPIYSLTAN HGL VRFSN ESI+DY DG+ LDW+ ATG+WVHV+I T FG+SMEV ISGAV GKAVWPS LKPVAW+ +MVRMKLGLYHS NNV G + + IW++G
Sbjct: 111 LKDYQIDWDCVFGPESLEEVFQRGGDFTTCPGATKAHPCSRFIVDKDEERSEVKVQEGPEGFPFLYGEEYIFKYSFQAIEDMQVATRFTHLGQLKGSAGGYMVKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGQSMEVNISGAVSGKAVWPSDLKPVAWHRDSEMVRMKLGLYHSIHNNVVFGCLWSGVHVYIWVDG 332
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5JXY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY2_9PHAE) HSP 1 Score: 318 bits (815), Expect = 1.170e-100 Identity = 169/363 (46.56%), Postives = 213/363 (58.68%), Query Frame = 1
Query: 1 MVRMKLGLYPSTHNVADGEVCHLPMNEHPTEDVDRVARHCTGNACTMFATGTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHG-----------------------------------------------EKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRVL 948
MVRMKLGLY S HNV D EV + ++ + R + + + G+C TC P G+ IDW+C+FG SL EV RGG +CP + EPCSRFIV KEKER+EV Q+G GF F G E YIF YSFRAK+GMKV+ T GQ+KG G+ + G+P++S+TAN++G+ VRF+N++ D +GM L WEDATG+WVHV+I T FGKSMEV SGAV+GKAVWPS KPVAW+ D + KLGLYH N VADGEVEYKNI I+GPNG++RTSS G + G P+G+T LGC +D DR+L
Sbjct: 167 MVRMKLGLYHSIHNVHDQEVIYQDISIEGPNGIIRTSPPSDIHIHSCSTFGSCSVSGTTCPPSSGSTIDWNCMFGVGSLAEVEARGGKLVSCPSGTDAEPCSRFIVPKEKERAEVLAQKGVGGFQFAKGRNGWPSVMGLVPKNVPSSRGRVVNGLTAKACITKRVRPPGFLPHPKGETYIFKYSFRAKDGMKVSGSSTRLGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEDD--DNVEGMDEFLSWEDATGEWVHVEIQTTFGKSMEVYFSGAVKGKAVWPSSYKPVAWSDDADTIMFKLGLYHIKNKVADGEVEYKNISIQGPNGLLRTSSVGDINHGPPQGITSLGCAKDARHDRLL 527
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5KAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW5_9PHAE) HSP 1 Score: 311 bits (798), Expect = 2.860e-100 Identity = 154/278 (55.40%), Postives = 198/278 (71.22%), Query Frame = 1
Query: 133 CTMFATGTCVQ--VDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGS-----KNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRV 945
C++ T T V +DITC+ + N IDWDCVFGP SL+EV+++GG T C + PCS F+V+K++ERSE KV EGP+GF + GEKYI YSFRA+EGM+V+ ++TH GQLKG+ G M+ DPIY LTAN GLMVRFSN+E ++ +G+S L+W+D+TG+WVHVKI T FG+ M V +SGAVEG+AVWPS+LKPVAW+ D VRMKLGLYH + V DG+VEY++I IEGPNGIIRTS + EG Y+GC D+ D V
Sbjct: 6 CSLAGTRTLVHGAIDITCDAEKDNHIDWDCVFGPGSLDEVNKKGGYMTKC-SGKRHYPCSLFVVKKDEERSETKVNEGPEGFDYYKGEKYIIKYSFRAEEGMRVSSKYTHLGQLKGTIGKGKVKGTMIKLDPIYCLTANKDGLMVRFSNREMPDNFHEGLSKHLNWKDSTGQWVHVKIVTTFGEFMVVRLSGAVEGRAVWPSNLKPVAWHRDADRVRMKLGLYHKIDQVYDGKVEYRDISIEGPNGIIRTSPEPDH-----EGHLYVGCFADDDDDHV 277
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5JBB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB3_9PHAE) HSP 1 Score: 299 bits (766), Expect = 1.190e-92 Identity = 165/354 (46.61%), Postives = 209/354 (59.04%), Query Frame = 1
Query: 1 MVRMKLGLYPSTHNVADGEVCHLPMNEHPTEDVDRVARHCTGNACTMFATGTCVQVDITCEPLQGNQIDWDCVFGPDSLEEVHQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNGYMVSGDPIYSLTANHHGLMVRFSNKESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSME-VEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYH------------------------------STNN-------VADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRVL 948
MVRMKLGLY S HNV D EV + ++ + R + + G+C + TC P G+ IDW+C+FG SL EV RGG +CP + EPCSRFIV KEKER+E Q+G GF F GE YIF YSFRAK+GMKV+ T GQ+KG G+ + G+P++S+TAN++G+ VRF+N++ D +GM L WEDATG+WVHV+I T FG+ V SGAV GKAVWP KPVAWN D + KLGLYH ST N VADGEVEYKNI I+GPNG++RTSS G + P+G+T LGC++D DR+L
Sbjct: 275 MVRMKLGLYHSIHNVHDQEVIYRDISIEGPNGIIRTSPPSDIHIHPCRTFGSCPRSVTTCPPSSGSTIDWNCMFGVGSLVEVEARGGKLVSCPSGTDAEPCSRFIVPKEKERAEA--QKGVGGFQFAKGETYIFKYSFRAKDGMKVSGSSTRLGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEDD--DNVEGMDEFLSWEDATGEWVHVEIQTTFGEVHGGVYFSGAVNGKAVWPPSYKPVAWNDDADTIMFKLGLYHIKNKVGRLEIPVRALETNSASSSLDGRSSPSTTNRSIPPPKVADGEVEYKNISIQGPNGLLRTSSVGDINHRPPQGITSLGCVKDARHDRLL 624
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D8LDJ9_ECTSI (Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ9_ECTSI) HSP 1 Score: 285 bits (730), Expect = 1.250e-90 Identity = 150/288 (52.08%), Postives = 184/288 (63.89%), Query Frame = 1
Query: 163 QVDITCEPLQGNQIDWDCVFGPDSLEEV-------HQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNG-YMVSGDPIYSLTANHHGLMVRFSN-KESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPE----GVTYLGCIRDNPADRVLPIRFSHPKMDTEV 987
++DITC+P + N IDWDC+FG DS EEV + T+C K PCSRFIV K +R+E KV GP+GFPFL GE+YI+ YSFRA EGMK+ KRFTH GQ+KG+ NG V GDPI S++AN GL VRFSN ++I DY S +W+DATG+WVHV I TVFG+SMEV+ +G V GK VWP PVAWN+ G M RMKLGLYH V DGEVE +++ IEGPNGIIRTS + E G YLGC D R+ ++ M T +
Sbjct: 44 KIDITCKPKKDNVIDWDCIFGEDSEEEVLKYRSKDKKERATHTSC--TDKDRPCSRFIVPKNVQRAETKVAYGPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWKDATGEWVHVTIDTVFGESMEVKFAGGVSGKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVGDGEVEIRDVSIEGPNGIIRTSPEESPSPSSKENDSKGHLYLGCFEDEKDKRIFGKKYVDAHMTTAI 329
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: A0A6H5K5S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5S3_9PHAE) HSP 1 Score: 264 bits (675), Expect = 1.680e-83 Identity = 150/305 (49.18%), Postives = 177/305 (58.03%), Query Frame = 1
Query: 67 LPMNEHPTEDVDRVARHCTGNACTMFATGTCVQVDITCEPLQGNQIDWDCVF------------------------------GPDSLEEV-------HQRGGLFTTCPKASKLEPCSRFIVEKEKERSEVKVQEGPDGFPFLHGEKYIFGYSFRAKEGMKVAKRFTHFGQLKGSKNG-YMVSGDPIYSLTANHHGLMVRFSN-KESIKDYADGMSTALDWEDATGKWVHVKITTVFGKSMEVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTS 864
LP DV R C +MF ++DITCEP + N IDWDC+F G DS EEV + T+C K PCSRFIV K +R+E KV GP+GFPFL GE+YI+ YSFRA EGMK+ KRFTH GQ+KG+ NG V GDPI S++AN GL VRFSN ++I DY S +WEDATG+WVHV I TVFG+ MEVE +G V GK VWP PVAWN+ G M RMKLGLYH V DGEVE +++ IEGPNGIIRTS
Sbjct: 21 LPPLRSVVRDVIVKNRCCNPRVSSMFNREA--RIDITCEPKKDNVIDWDCIFVSVKLVAVPLINVLRTNTRSSSPPRFDLLKGEDSEEEVLKYRSKDKKERATHTSC--TDKDRPCSRFIVPKNVQRAETKVAYGPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWEDATGEWVHVTIDTVFGEFMEVEFAGGVSGKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVGDGEVEIRDVSIEGPNGIIRTS 321
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Match: D7FK18_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK18_ECTSI) HSP 1 Score: 113 bits (282), Expect = 4.320e-26 Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 598 ALDWEDATGKWVHVKITTVFGKSM--EVEISGAVEGKAVWPSHLKPVAWNSAGDMVRMKLGLYHSTNNVADGEVEYKNIWIEGPNGIIRTSSKGVKDTGIPEGVTYLGCIRDNPADRV 945
A+D K H+ VFG EV +SGAVEG+AVWPS+LKPVAW+ D VRMKLGLYH T+ V DG+VEY++I IEGPNGIIRTS + EG Y+GC D+ D V
Sbjct: 18 AIDITCDAEKGNHIDWDGVFGPGSLDEVRLSGAVEGRAVWPSNLKPVAWHRDADRVRMKLGLYHKTDQVYDGKVEYRDISIEGPNGIIRTSPEPDH-----EGHLYVGCFADDDDDHV 130 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23206.6248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23206.6248.1 >prot_H-paniculata_contig23206.6248.1 ID=prot_H-paniculata_contig23206.6248.1|Name=mRNA_H-paniculata_contig23206.6248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp MVRMKLGLYPSTHNVADGEVCHLPMNEHPTEDVDRVARHCTGNACTMFATback to top mRNA from alignment at H-paniculata_contig23206:680..3757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23206.6248.1 ID=mRNA_H-paniculata_contig23206.6248.1|Name=mRNA_H-paniculata_contig23206.6248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3078bp|location=Sequence derived from alignment at H-paniculata_contig23206:680..3757- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23206:680..3757- >mRNA_H-paniculata_contig23206.6248.1 ID=mRNA_H-paniculata_contig23206.6248.1|Name=mRNA_H-paniculata_contig23206.6248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at H-paniculata_contig23206:680..3757- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |