mRNA_H-paniculata_contig22955.6150.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: D8LRY2_ECTSI (ArfGAP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY2_ECTSI) HSP 1 Score: 311 bits (796), Expect = 1.980e-96 Identity = 200/331 (60.42%), Postives = 220/331 (66.47%), Query Frame = 1
Query: 31 QEAHSADALYCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQVRAKHALFFRGGGGXXXXXXXXVSGNGTLDTDDFTSDEEAWPHRGANGG-----GENGGRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVEGSSNXXXXXXXXXXXXXXSSAGDFAAANGAGFSTSXXXAVGRGSHRXXXXXXXXXXXXXXQRDSGGGGIFGSDGGSRAGAERWSLRLSECAATGDLAGAVEALAHG 1008
+E HS+DALYCFEV SANRRSY LQAEGP+EL SW IRR+IESQ+ L GGG SG GT DD TSDE+ + ANGG G+ G NPLVQEVM+ANPECADCG+PNPDWVSLNLGVL+CIQCS GIHRSLGTHVSKVRSLGLDALDE DLSVLREVGNA+SNAIWEHSL Q+ GW KPT +SP + KR ++QAKYVWKGFVEGS++ AG XXX X XXXXXXXXX F + GG GAE WSLRLSECAA GDLAGAVEALAHG
Sbjct: 381 KEVHSSDALYCFEVFSANRRSYMLQAEGPEELTSWVTCIRRTIESQLTGSTPLPGDDGGGGTPTGRPN-SGTGTSYADD-TSDEDGYRSL-ANGGMGARGGDAGRSPNNPLVQEVMKANPECADCGAPNPDWVSLNLGVLVCIQCS-GIHRSLGTHVSKVRSLGLDALDEIDLSVLREVGNARSNAIWEHSLAQREGWEKPTANSPGDLKRSYIQAKYVWKGFVEGSTSRLV-------------AGGXXXXXXXXXXXXXXXXXXXXXXXXHSRRXXXXXXXXXXXXXXXXXXFAARGG---GAEMWSLRLSECAALGDLAGAVEALAHG 691
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: A0A6H5L7N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7N2_9PHAE) HSP 1 Score: 311 bits (796), Expect = 3.770e-96 Identity = 208/342 (60.82%), Postives = 228/342 (66.67%), Query Frame = 1
Query: 31 QEAHSADALYCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQVRAKHALFFRGGGGXXXXXXXXVSGNGTLDTDDFTSDEEAWPHRGANGGGENGGRE----RNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVEGSSNXXXXXXXXXXXXXXSSAGDFAA------------ANGAGFSTSXXXAVGRGSHRXXXXXXXXXXXXXXQRDSGGGGIFGSDGGSRAGAERWSLRLSECAATGDLAGAVEALAHG 1008
+E HS+DALYCFEV SANRRSY LQAEGPDEL SW IRR+IESQ+ L GGG SG GT DD TSDEE + GGG GG NPLVQEVM+ANPECADCG+PNPDWVS+NLGVL+CIQCS GIHRSLGTHVSKVRSLGLDALDE DLSVLREVGNA+SNAIWEHSL Q+ GW KPT +SP + KR ++QAKYVWKGFVEGS++ XXXXX ++G G XX XXXXXXXXXXXXXX F + GG GAE WSLRLSECAA GDLAGAVEALAHG
Sbjct: 453 KEVHSSDALYCFEVFSANRRSYMLQAEGPDELTSWVTCIRRTIESQLTGSTPLPGDDGGGGTPTGRLN-SGAGTSYADD-TSDEEGYRSLANGGGGARGGDAGRPPNNPLVQEVMKANPECADCGAPNPDWVSINLGVLVCIQCS-GIHRSLGTHVSKVRSLGLDALDEIDLSVLREVGNARSNAIWEHSLAQREGWEKPTANSPGDLKRSYIQAKYVWKGFVEGSTSRLVAGGGWGXXXXXXXXXXXXXXXXXXXXXXXXXSSGDGGGVXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAARGG---GAEMWSLRLSECAALGDLAGAVEALAHG 788
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: K0TI75_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TI75_THAOC) HSP 1 Score: 177 bits (450), Expect = 3.750e-46 Identity = 95/224 (42.41%), Postives = 136/224 (60.71%), Query Frame = 1
Query: 58 YCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQVRA-----KHALFFRGGGGXXXXXXXXVSGNGT-LDTDDFTSDEEAW--PHRGANGGG-----ENGGRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVE 690
+CFE+IS N +SY LQA GPD+ K W IR IE Q+ A ++ L G G +T D++ D ++ R + GGG +N ++PL+ ++++AN CADC + NPDW SLNLGVL+CI+CS G+HRSLG HVSKVRS+ LD + +++ +L E+GN +N IWE L Q GW+KP +P + K ++++KYVWKGF+E
Sbjct: 593 FCFEIISPNSKSYLLQACGPDDYKMWVDGIRSCIEQQLIAGKLPPENMLLGNSSGKSSKAGPYRSKGKAAETETIDYSVDGDSAIAGRRSSVGGGLFSPEQNTAPGKSPLIPKILEANRVCADCSAINPDWASLNLGVLVCIECS-GVHRSLGVHVSKVRSIRLDDIRDSEYKLLMEIGNDNANTIWEAGLHHQKGWTKPQSGAPRKAKEEWIKSKYVWKGFLE 815
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: A0A7S2LIT9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LIT9_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.250e-44 Identity = 94/218 (43.12%), Postives = 130/218 (59.63%), Query Frame = 1
Query: 58 YCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQ-----VRAKHALFFRGGG--GXXXXXXXXVSGNGTLDTDDFTSDEEAWPHRGANGGGENGGRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVE 690
+CFE+IS N + Y LQA GP++ K W IR IE Q + + L G S + +T+ +E ++G + GG+ RNPLV +V++ANP CADCG+ NPDW SLNLGV++CI+CS G+HRSLG HVSKVRSL +D + + +VL +GN N IWE L Q GW+KP +P + K ++++KYVWKGF+E
Sbjct: 458 FCFEIISPNSKPYLLQACGPNDYKMWVGGIRACIEQQFTHGSLPPDNMLMTSKSTSPGKRMLGRNPSSMSSGPETESIFFEEGKDNNKGLFEE-DAGGKVRNPLVPKVLEANPVCADCGNANPDWASLNLGVIVCIECS-GVHRSLGVHVSKVRSLRMDTISDAATNVLLGLGNENVNRIWEAGLHHQKGWTKPKGGAPRKAKEEWIKSKYVWKGFLE 673
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: B8BVF6_THAPS (ArfGAP (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVF6_THAPS) HSP 1 Score: 155 bits (391), Expect = 1.050e-41 Identity = 90/216 (41.67%), Postives = 120/216 (55.56%), Query Frame = 1
Query: 43 SADALYCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQVRAKHALFFRGGGGXXXXXXXXVSGNGTLDTDDFTSDEEAWPHRGANGGGENGGRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVE 690
+++ +CFE+IS N +SY LQA GP++ K W IR I K F R G G T+ + DE A+G G G R + + CADCG+ +PDW SLNLGV++CI+CS G+HRSLG HVSKVRSL LD + E + +L E+GN K N IWE L Q GW+KP + K ++++KY+WKGFVE
Sbjct: 64 NSNLRWCFEIISPNSKSYMLQACGPNDFKMWVGGIRSCIGKITPRK---FGRNGA------------RGGTQTESISFDEGGDAEGNASGHG--GAR------LALFDNDFVCADCGNVDPDWASLNLGVVLCIECS-GVHRSLGVHVSKVRSLRLDTISEFEYKLLLELGNDKVNQIWEAGLHHQKGWTKPKGGATRRVKEEWIKSKYLWKGFVE 255
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: A0A448Z6Q3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6Q3_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.190e-41 Identity = 91/228 (39.91%), Postives = 124/228 (54.39%), Query Frame = 1
Query: 31 QEAHSADALYCFEVISA-NRRSYTLQAEGPDELKSWTLAIRRSIESQVRA---KHALFFRGGGGXXXXXXXXVSGNGTLDTDDFTSDEEAWPHRGANGGGENGGRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVEGSSN 702
+E +CFEV S +++ LQA GPDE K W IR+ IE Q+ + H RG +D + + H + + L ++M+ANP CADCG+ NPDWVSLNLGVL+CI CS G+HRSLG HVSKVRSL LDAL E + +V+ +GN +N IWE + Q GW KP S + K ++++KY+WKGF+ S +
Sbjct: 1204 KEGTKGGPRFCFEVHSPMSQKPLVLQARGPDEFKKWVDIIRKGIEHQLASGNTTHITPKRGMPARSDSNESFQDETENVDMPELHDIDNQLCHEELDA-------KNTSLTPKLMKANPTCADCGAENPDWVSLNLGVLICIDCS-GVHRSLGVHVSKVRSLKLDALTEFEANVILAIGNENANGIWEEGVLMQKGWKKPIASSNRKTKEEWIKSKYLWKGFLNVSDD 1423
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: A0A2R5GGS8_9STRA (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGS8_9STRA) HSP 1 Score: 163 bits (412), Expect = 5.870e-41 Identity = 94/217 (43.32%), Postives = 124/217 (57.14%), Query Frame = 1
Query: 49 DALYCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQVRAKHALFFRGGGGXXXXXXXXVSGNGTLDTDDFTSDEEAWPHRGANGGGENGGRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVEGSS 699
D +CFE++S NRR+Y +QAE ++ W IR S E + F G VS + TD T EEA + A G +P + V +AN CADCG+ PDW S+NLGVL+CI+CS GIHRSLG HVSKVRS+ LD+ + +VL +GN NAI+E L +Q W+KP P +P K RF+QAKYVWK F+E ++
Sbjct: 1125 DMSFCFEILSPNRRTYVMQAENEISMREWIDTIRTSTERLITD-----FGG--------QSQVSRTSEVSTDPGT--EEATKTKFAAGQ-----LCSDPQLLAVQEANTTCADCGAAQPDWASINLGVLVCIECS-GIHRSLGVHVSKVRSMTLDSWTDASKAVLEALGNEAVNAIFEAHLSEQEEWAKPEPDAPRRVKERFIQAKYVWKAFLEDAA 1320
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: A0A7S1ZFW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZFW7_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.520e-40 Identity = 98/270 (36.30%), Postives = 136/270 (50.37%), Query Frame = 1
Query: 40 HSADALYCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQV-----------------RAKHALF------------------FRG-------------GGGXXXXXXXXVSGNGTL--DTDDFTSDEEAWPHRGANGGGENGGRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVEGSS 699
+S +CFE+IS N R Y LQA GP E + W +IR +IE Q+ + A F F G G SG+ D DDF+ + N RNPLV++++ ANP CADCG+P+PDW S+NLGVL+CI+CS G+HRSLG HVSKVRS+ LD L E + +L +GN K+N IWE + Q GW KP + + K+ ++++K++WKGF+E S+
Sbjct: 556 NSGGLRFCFEIISPNSRPYMLQACGPQEFRIWVDSIRSAIEKQLVQGGVPPDSMLLGAGKPTRRRASFSNPFSDIGNSSMGSTDDEFSGEDDNLGSLYRKSIDGSEAAISSMMQSGSAPFMRDDDDFSVMTSTTSIQPCN---------RNPLVKKILDANPICADCGAPSPDWASINLGVLLCIECS-GVHRSLGVHVSKVRSVRLDELSEPEARLLLALGNEKANRIWEAATGIQAGWKKPNANDSQKLKQDWIKSKFLWKGFLEYSA 815
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: A0A7R9UG56_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG56_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.010e-39 Identity = 88/222 (39.64%), Postives = 121/222 (54.50%), Query Frame = 1
Query: 31 QEAHSADAL-YCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQVRAKHALFFRGGGGXXXXXXXXVSGNGTLDTDDFTSDEEAWPHRGANGGGENGGRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFVEG 693
+E H L +CFE++SANRRSY LQAEGPDEL +W AIR I Q+ + T ++D ++ +R A V E+ + + CADC + +PDWV +N+G L+CI+CS GIHRSLG HVSKVRS+ LD LD D+ VLR +GN N + E L Q GW +P +K +F+++KYV++GF G
Sbjct: 541 REVHQNPELRFCFEILSANRRSYMLQAEGPDELAAWVEAIRSCIARQLATGESE--------------------TRGSEDGDAEGPGCGYREA--------------VNELCRRSSRCADCDAADPDWVIINIGCLVCIECS-GIHRSLGVHVSKVRSVVLDRLDAVDMRVLRRLGNYAVNRLMEAGLPSQTGWKRPVVGDSRADKEKFIRSKYVYRGFTSG 727
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Match: A0A7S1BVQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVQ1_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.030e-39 Identity = 94/238 (39.50%), Postives = 129/238 (54.20%), Query Frame = 1
Query: 58 YCFEVISANRRSYTLQAEGPDELKSWTLAIRRSIESQVR---------------AKHALFFRGG------GGXXXXXXXXVSGNGTLDTDDFTSDEEA---WPHRGANGGGENG----GRERNPLVQEVMQANPECADCGSPNPDWVSLNLGVLMCIQCSAGIHRSLGTHVSKVRSLGLDALDETDLSVLREVGNAKSNAIWEHSLDQQGGWSKPTPHSPAEEKRRFVQAKYVWKGFV 687
+CFE+I+ N R Y LQA GP + K W +IR +I +++ + GG GG S + + T++ A PH G G N GR+ + +++++ AN CADCG+ +PDW SLN+GV++CI+CS G+HRSLG HVSKVRSL LD + + VL+E+GN K N I E SLD GW+KPTP K F++AKY WKGFV
Sbjct: 375 FCFEIITPNNRPYMLQARGPRDFKMWVESIRNAIGNELAHGPMSLPNQGDATEDGVNGWVLEGGSGDEATGGSSKLIMNAPSYDSDMPLSPTTTEGSADVPSPH----GTGRNSMAPVGRDSS-SIRDLLSANLTCADCGAKDPDWASLNMGVIVCIECS-GVHRSLGVHVSKVRSLTLDKISVLECRVLKELGNEKINTIMEASLDTAEGWTKPTPEVSRVRKEAFIKAKYQWKGFV 606 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22955.6150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22955.6150.1 >prot_H-paniculata_contig22955.6150.1 ID=prot_H-paniculata_contig22955.6150.1|Name=mRNA_H-paniculata_contig22955.6150.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=336bp LFIYFLVLLKQEAHSADALYCFEVISANRRSYTLQAEGPDELKSWTLAIRback to top mRNA from alignment at H-paniculata_contig22955:305..3951+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22955.6150.1 ID=mRNA_H-paniculata_contig22955.6150.1|Name=mRNA_H-paniculata_contig22955.6150.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3647bp|location=Sequence derived from alignment at H-paniculata_contig22955:305..3951+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22955:305..3951+ >mRNA_H-paniculata_contig22955.6150.1 ID=mRNA_H-paniculata_contig22955.6150.1|Name=mRNA_H-paniculata_contig22955.6150.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2016bp|location=Sequence derived from alignment at H-paniculata_contig22955:305..3951+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |