mRNA_H-paniculata_contig22916.6129.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22916.6129.1
Unique NamemRNA_H-paniculata_contig22916.6129.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 2.420e-120
Identity = 175/215 (81.40%), Postives = 193/215 (89.77%), Query Frame = 1
Query:  163 VVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            VVGNMQEEI KA +PIIHYGLDLWTCK+SG KYLG+HVFYVDSNF LRH L+ VKHYAPS E Q   KASEILFTIF+ATLAEYGI +SDLAGGTTDSGSDVKAMCVNILL L++IWWDWCDCHLADK+AEN FGTSADPQ+SKNK AR+V+KLVIK+AAK+NQST  KQKF++  L++L E LKITKHAPQRWLSLV VMERIIRLWHVLRKVY
Sbjct:  205 VVGNMQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVY 419          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 5.860e-110
Identity = 167/229 (72.93%), Postives = 194/229 (84.72%), Query Frame = 1
Query:  121 KHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            KH++VEMY+ATKK VVGNM  EI++A +PI+HYG+DLW CK++GLKY+ +HV YV+SN +L+H LL VKHYAPS   Q  GKASEILF +F + L E+G+ +SDLAGGTTDSGSDVKAMCVN LLA ++  WDWC CHLAD+AAE AFGTSADPQK KNK+AR VV+LVIK+AAKVNQS  FKQKFDEAQL +  E LKI KHAPQRWLSLVRVMERIIRLWHVLRKVY
Sbjct:  210 KHLLVEMYVATKKAVVGNMLTEIERAPLPIVHYGIDLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVY 438          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 1.280e-88
Identity = 139/269 (51.67%), Postives = 193/269 (71.75%), Query Frame = 1
Query:    1 MLVDRFLPFSFFSSTPSWQELSGVLTADEVPFSPLSARRVKHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            ++V++ LPFSFFSS  +++E+    T     +  L  RRVKH++ E+Y+ATKK VVGNM +E+++A +PI+H+ +D+WT K SG K+LG+HVFYVD+NF+L+  LL +K YAP   +    +AS++LF I ++ L E+G+  S LA GTTDSGSDVKA+  N L  +Y + W WC CHL  KAAE A+G   DP KSKN +AR+++K V+K    +N+S  FK KF++ Q+D+L E  K+ KHAPQRWLSL R +ER IRLWHVLRK+Y
Sbjct:  188 LVVEKMLPFSFFSSGGTFKEMMATATGTS-SYPTLPPRRVKHLITELYVATKKVVVGNMVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLY 455          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 3.710e-78
Identity = 127/268 (47.39%), Postives = 181/268 (67.54%), Query Frame = 1
Query:    4 LVDRFLPFSFFSSTPSWQELSGVLTADEVPFSPLSARRVKHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            +V++ LPF F+SS   ++E+          +  L  +RVKH++VE+Y +TKK V+G+M  E++ A +PI+H+ +D+WT K SG K+LG+H+FYV +NF+L+  L+               KA+E+L  I ++ L E+G+  SDLA GTTDSGSDVK++ VN L   Y + W+WC CHL  KAAE+AFGT  DPQKSKN E R+++K VI     +++S     KF++ Q+DLL E LKI   APQRWL+LVR +ER+IRLWHVLRK++
Sbjct:  115 VVEKMLPFHFYSSGEMFREMMAT-HGGNTSYPELPPKRVKHLLVELYCSTKKAVLGDMLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALI-------------SAKAAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLH 368          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.340e-75
Identity = 120/163 (73.62%), Postives = 144/163 (88.34%), Query Frame = 1
Query:  319 RVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            +VKHYAPS   Q   KAS +LFT+F++ LAE+GI +SDLAGGTTDSGSD+KAMC N LLA + ++WDWC CHLAD+AAE AFGTSADPQKSKNK+AR+VV L+IK+AAKVNQS  FKQKFDEAQ+++L ETLKI++HAPQRWLSLVRV+ERIIRLWHVLRK++
Sbjct:   81 QVKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRKLF 243          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 2.800e-70
Identity = 116/238 (48.74%), Postives = 166/238 (69.75%), Query Frame = 1
Query:    1 MLVDRFLPFSFFSSTPSWQELSGVLTADEVPFSPLSARRVKHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLL--RVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKE 708
            +LV++ LP SFFSS    + L  ++   + P  PL  RRVKH++ E+Y+ATKK VVGNM EE++KA +P++H+ +D+WT K SG K+LG+H++YV ++F+++H LL   VK Y+P   A  + +ASE+L  I ++ L E G++ SDLA GTTDSGSDVKA+ VN L   Y + W+WC CH+  KAAE AFG   DP KSKN  AR+V+K+VIK    +N+S+  + KF++ Q +LL E
Sbjct:   43 LLVEKLLPVSFFSSGDELRTLLALIGDSDFP--PLRPRRVKHLLTELYVATKKVVVGNMLEEVRKAPLPVLHHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACHMMVKAAEQAFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSYLRAKFEDLQTELLGE 278          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 3.440e-69
Identity = 115/211 (54.50%), Postives = 151/211 (71.56%), Query Frame = 1
Query:  175 MQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            M EE++ A +PI+H+ +D+W  K SG K+LG+HVFYV +NF+L+  LL +K Y PS +A  + KA+E+L  I +A L E+G   SDLA GTTDSGSDVK++ VN L   Y + W+WC CHL  KAAE+AFGT  DPQKSKN EA  ++K +I     +++S     KF++ Q+DLL E LKI   APQRWL+LVR MER+IRLWHVLRK+Y
Sbjct:    1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLY 211          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 9.720e-63
Identity = 114/243 (46.91%), Postives = 151/243 (62.14%), Query Frame = 1
Query:   79 ADEVPFSPLSARRVKHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            A   P+  L A RVK ++VEMY+ATKK V+ NM EE+K A +PI+H+ +D+WT K SG K L                           E    G    +L  I +A L E+G+  SDLA GT DSGSDVK++  N L   + + W+WC CHL  KAAE+ FGT  DPQKSKN EAR+++K +I     +++S+ FK KFD+ Q+D+L E LKI   AP+RWL+LVR +ER+IRLWHVLRK+Y
Sbjct:   10 AGNTPYPELPAERVKDLLVEMYIATKKAVMSNMLEEVKNAPLPILHHMIDIWTDKGSGRKTLW--------------------------ERPRPG----VLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLY 222          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.800e-60
Identity = 108/211 (51.18%), Postives = 145/211 (68.72%), Query Frame = 1
Query:  175 MQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            M EE++ A +PI+H+ +D+W  K SG K+LG+HVFYV +NF+L+  LL         +A  + KA+E+L  I +A L E+G+  SDLA GTTDSGSDVK++ VN L   Y + W+WC CHL  KAAE+AFGT  DPQ SKN EAR ++K +I     +++S     KF++ Q+DLL E L I   APQRWL+LVR MER+IRLW V+RK+Y
Sbjct:    1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSN-LTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLY 202          
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 6.080e-52
Identity = 91/163 (55.83%), Postives = 119/163 (73.01%), Query Frame = 1
Query:  319 RVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
            ++K Y+PS +A  +  ASE+L  IF++ L E+G+  SDLA GTTDSGSDVK+  VN L   Y + W+WC CHL  KAAE+ FGT  DPQKSKN EAR+++K VI     +N+S+ FK KF++ Q+DLL + LKI   APQRWL+ VR +ER+IRLWHVLRK+Y
Sbjct:    9 QIKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLY 171          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYQ2_9PHAE2.420e-12081.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1G0_9PHAE5.860e-11072.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJJ9_9PHAE1.280e-8851.67Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KS21_9PHAE3.710e-7847.39Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KZ46_9PHAE1.340e-7573.62Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KZ81_9PHAE2.800e-7048.74Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JB08_9PHAE3.440e-6954.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8D8_9PHAE9.720e-6346.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ66_9PHAE1.800e-6051.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE6_9PHAE6.080e-5255.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22916contigH-paniculata_contig22916:174..1840 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score131.7
Seed ortholog evalue5e-28
Seed eggNOG ortholog2880.D7G3L2
Hectar predicted targeting categoryother localisation
EggNOG OGs2CZK4@1,2SARG@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size807
Cds size807
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22916.6129.1prot_H-paniculata_contig22916.6129.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22916 174..1840 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929640.451213-CDS-H-paniculata_contig22916:173..6591622929640.451213-CDS-H-paniculata_contig22916:173..659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22916 174..659 -
1691480947.2151363-CDS-H-paniculata_contig22916:173..6591691480947.2151363-CDS-H-paniculata_contig22916:173..659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22916 174..659 -
1622929640.468083-CDS-H-paniculata_contig22916:1055..12171622929640.468083-CDS-H-paniculata_contig22916:1055..1217Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22916 1056..1217 -
1691480947.2240632-CDS-H-paniculata_contig22916:1055..12171691480947.2240632-CDS-H-paniculata_contig22916:1055..1217Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22916 1056..1217 -
1622929640.482914-CDS-H-paniculata_contig22916:1681..18401622929640.482914-CDS-H-paniculata_contig22916:1681..1840Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22916 1682..1840 -
1691480947.2320452-CDS-H-paniculata_contig22916:1681..18401691480947.2320452-CDS-H-paniculata_contig22916:1681..1840Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22916 1682..1840 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22916.6129.1

>prot_H-paniculata_contig22916.6129.1 ID=prot_H-paniculata_contig22916.6129.1|Name=mRNA_H-paniculata_contig22916.6129.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp
MLVDRFLPFSFFSSTPSWQELSGVLTADEVPFSPLSARRVKHVVVEMYLA
TKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQ
LRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTT
DSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNK
EAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLS
LVRVMERIIRLWHVLRKVY
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mRNA from alignment at H-paniculata_contig22916:174..1840-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22916.6129.1 ID=mRNA_H-paniculata_contig22916.6129.1|Name=mRNA_H-paniculata_contig22916.6129.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1667bp|location=Sequence derived from alignment at H-paniculata_contig22916:174..1840- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTGTGGACAGGTTTTTGCCCTTTAGCTTCTTTTCATCCACCCCCTC GTGGCAGGAGCTATCGGGGGTTTTAACCGCCGACGAAGTGCCTTTCTCGC CGCTCTCTGCCAGGCGCGTCAAGCACGTCGTTGTGGAGATGTACCTCGCC ACAAAGAAGGTCAGCTGTGATTTTTTGTTTTTATTTTCCATATGACAGCA GCACGCGTACGTTGTGTGTGATTTTCATTTCAGTTTCTCGCTCTCTTGTT ACGATGATACGAAGTAATAACAATTACTCCTGTCTCTTCCTGTACAATTA ATACTTCGTTCCTCTGTCCCATACTTTTGTTTCAAAGTTTATATTTCCTG CCGCACCGCGGTTGAATCAACGTGACCGACATCCCTCCAAATTTAGCAGG GTTTTATTTTGGATTGCATATTTATATTTTTATTTATATTTATACTCCGA AGTATTTAATAGTTATATTTCTCCGCACAGGTTGTTGTTCGAAGAGACAT CCCAAAAATCAAAACAGATATGATATGCCGAGAACACAAACACTACTGCA TAGGAAATCACAATCACAATCATAATTTATCATCACTCATCGATTCCTTC ATATCTAACTGCCGGCCCCGCAGAAAGTGGTCGGGAACATGCAGGAGGAG ATCAAGAAGGCAACGATGCCCATCATCCACTACGGGCTCGACCTTTGGAC GTGCAAGCTCTCGGGGCTGAAATACCTCGGAATCCACGTCTTCTATGTGG ACAGCAATTTCCAGCTGCGGCACGTTCTTCTTCGTGTAAGTGAGGTTGAC TCACCCACGACCCTGGCCCATGGCCGACTTGATCCCCCCCCACATGTGCG GCCATGCATGGATGCGTGTGTGTGTGCGCGCGTCCCCGCGTGTGTGTATG TGTGTGGTTTCGTCCCATTTAGTCTGTAGTATATCGTGCACTTTTTCAGT GCACGATATCTTTCCGTGTGTGTCCTACACCAGTGGTGTTGTTTCGTAAG GACGTAAACTGAAACTTGTTAGCCGGGGGAGGTAAACACAGACAGTATTG TTTTTTCACTTTTAGCCCCGTGCGTGCCTTCATATTTTTTTGCACTGAAC TTTTTTTTATTTTACCTGTCGTGCCACTAAAACCCTTTCTTTTCTTCACC TCCCCCCCCCCAATTATTGCGTAATTTACAGGTGAAGCACTACGCCCCTT CGGTGGAGGCGCAGGAGCAGGGAAAGGCAAGCGAGATCCTCTTCACCATT TTCCAGGCGACGCTGGCGGAGTACGGCATCAATGTGTCTGACCTTGCTGG TGGAACGACGGACAGTGGCTCCGACGTCAAGGCGATGTGCGTCAACATCC TCCTGGCGCTGTACCAGATCTGGTGGGATTGGTGCGACTGCCACCTGGCC GACAAGGCTGCCGAGAACGCCTTCGGCACCTCGGCGGACCCCCAGAAGTC GAAAAACAAGGAAGCTCGCGAGGTTGTCAAACTCGTAATCAAGAGCGCGG CGAAGGTGAACCAGTCCACCACCTTCAAGCAGAAGTTCGACGAGGCCCAG CTCGACTTGCTCAAGGAGACCTTGAAGATCACCAAACACGCGCCCCAGCG ATGGCTGAGCCTCGTTCGCGTCATGGAGCGCATCATTCGTCTGTGGCACG TCCTCCGGAAGGTCTAC
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Coding sequence (CDS) from alignment at H-paniculata_contig22916:174..1840-

>mRNA_H-paniculata_contig22916.6129.1 ID=mRNA_H-paniculata_contig22916.6129.1|Name=mRNA_H-paniculata_contig22916.6129.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at H-paniculata_contig22916:174..1840- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTGTGGACAGGTTTTTGCCCTTTAGCTTCTTTTCATCCACCCCCTC
GTGGCAGGAGCTATCGGGGGTTTTAACCGCCGACGAAGTGCCTTTCTCGC
CGCTCTCTGCCAGGCGCGTCAAGCACGTCGTTGTGGAGATGTACCTCGCC
ACAAAGAAGATGCTTGTGGACAGGTTTTTGCCCTTTAGCTTCTTTTCATC
CACCCCCTCGTGGCAGGAGCTATCGGGGGTTTTAACCGCCGACGAAGTGC
CTTTCTCGCCGCTCTCTGCCAGGCGCGTCAAGCACGTCGTTGTGGAGATG
TACCTCGCCACAAAGAAGAAAGTGGTCGGGAACATGCAGGAGGAGATCAA
GAAGGCAACGATGCCCATCATCCACTACGGGCTCGACCTTTGGACGTGCA
AGCTCTCGGGGCTGAAATACCTCGGAATCCACGTCTTCTATGTGGACAGC
AATTTCCAGCTGCGGCACGTTCTTCTTCGTAAAGTGGTCGGGAACATGCA
GGAGGAGATCAAGAAGGCAACGATGCCCATCATCCACTACGGGCTCGACC
TTTGGACGTGCAAGCTCTCGGGGCTGAAATACCTCGGAATCCACGTCTTC
TATGTGGACAGCAATTTCCAGCTGCGGCACGTTCTTCTTCGTGTGAAGCA
CTACGCCCCTTCGGTGGAGGCGCAGGAGCAGGGAAAGGCAAGCGAGATCC
TCTTCACCATTTTCCAGGCGACGCTGGCGGAGTACGGCATCAATGTGTCT
GACCTTGCTGGTGGAACGACGGACAGTGGCTCCGACGTCAAGGCGATGTG
CGTCAACATCCTCCTGGCGCTGTACCAGATCTGGTGGGATTGGTGCGACT
GCCACCTGGCCGACAAGGCTGCCGAGAACGCCTTCGGCACCTCGGCGGAC
CCCCAGAAGTCGAAAAACAAGGAAGCTCGCGAGGTTGTCAAACTCGTAAT
CAAGAGCGCGGCGAAGGTGAACCAGTCCACCACCTTCAAGCAGAAGTTCG
ACGAGGCCCAGCTCGACTTGCTCAAGGAGACCTTGAAGATCACCAAACAC
GCGCCCCAGCGATGGCTGAGCCTCGTTCGCGTCATGGAGCGCATCATTCG
TCTGTGGCACGTCCTCCGGAAGGTCTACGTGAAGCACTACGCCCCTTCGG
TGGAGGCGCAGGAGCAGGGAAAGGCAAGCGAGATCCTCTTCACCATTTTC
CAGGCGACGCTGGCGGAGTACGGCATCAATGTGTCTGACCTTGCTGGTGG
AACGACGGACAGTGGCTCCGACGTCAAGGCGATGTGCGTCAACATCCTCC
TGGCGCTGTACCAGATCTGGTGGGATTGGTGCGACTGCCACCTGGCCGAC
AAGGCTGCCGAGAACGCCTTCGGCACCTCGGCGGACCCCCAGAAGTCGAA
AAACAAGGAAGCTCGCGAGGTTGTCAAACTCGTAATCAAGAGCGCGGCGA
AGGTGAACCAGTCCACCACCTTCAAGCAGAAGTTCGACGAGGCCCAGCTC
GACTTGCTCAAGGAGACCTTGAAGATCACCAAACACGCGCCCCAGCGATG
GCTGAGCCTCGTTCGCGTCATGGAGCGCATCATTCGTCTGTGGCACGTCC
TCCGGAAGGTCTAC
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