mRNA_H-paniculata_contig22916.6129.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 361 bits (926), Expect = 2.420e-120 Identity = 175/215 (81.40%), Postives = 193/215 (89.77%), Query Frame = 1
Query: 163 VVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
VVGNMQEEI KA +PIIHYGLDLWTCK+SG KYLG+HVFYVDSNF LRH L+ VKHYAPS E Q KASEILFTIF+ATLAEYGI +SDLAGGTTDSGSDVKAMCVNILL L++IWWDWCDCHLADK+AEN FGTSADPQ+SKNK AR+V+KLVIK+AAK+NQST KQKF++ L++L E LKITKHAPQRWLSLV VMERIIRLWHVLRKVY
Sbjct: 205 VVGNMQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVY 419
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 343 bits (881), Expect = 5.860e-110 Identity = 167/229 (72.93%), Postives = 194/229 (84.72%), Query Frame = 1
Query: 121 KHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
KH++VEMY+ATKK VVGNM EI++A +PI+HYG+DLW CK++GLKY+ +HV YV+SN +L+H LL VKHYAPS Q GKASEILF +F + L E+G+ +SDLAGGTTDSGSDVKAMCVN LLA ++ WDWC CHLAD+AAE AFGTSADPQK KNK+AR VV+LVIK+AAKVNQS FKQKFDEAQL + E LKI KHAPQRWLSLVRVMERIIRLWHVLRKVY
Sbjct: 210 KHLLVEMYVATKKAVVGNMLTEIERAPLPIVHYGIDLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVY 438
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 290 bits (741), Expect = 1.280e-88 Identity = 139/269 (51.67%), Postives = 193/269 (71.75%), Query Frame = 1
Query: 1 MLVDRFLPFSFFSSTPSWQELSGVLTADEVPFSPLSARRVKHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
++V++ LPFSFFSS +++E+ T + L RRVKH++ E+Y+ATKK VVGNM +E+++A +PI+H+ +D+WT K SG K+LG+HVFYVD+NF+L+ LL +K YAP + +AS++LF I ++ L E+G+ S LA GTTDSGSDVKA+ N L +Y + W WC CHL KAAE A+G DP KSKN +AR+++K V+K +N+S FK KF++ Q+D+L E K+ KHAPQRWLSL R +ER IRLWHVLRK+Y
Sbjct: 188 LVVEKMLPFSFFSSGGTFKEMMATATGTS-SYPTLPPRRVKHLITELYVATKKVVVGNMVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLY 455
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE) HSP 1 Score: 251 bits (642), Expect = 3.710e-78 Identity = 127/268 (47.39%), Postives = 181/268 (67.54%), Query Frame = 1
Query: 4 LVDRFLPFSFFSSTPSWQELSGVLTADEVPFSPLSARRVKHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
+V++ LPF F+SS ++E+ + L +RVKH++VE+Y +TKK V+G+M E++ A +PI+H+ +D+WT K SG K+LG+H+FYV +NF+L+ L+ KA+E+L I ++ L E+G+ SDLA GTTDSGSDVK++ VN L Y + W+WC CHL KAAE+AFGT DPQKSKN E R+++K VI +++S KF++ Q+DLL E LKI APQRWL+LVR +ER+IRLWHVLRK++
Sbjct: 115 VVEKMLPFHFYSSGEMFREMMAT-HGGNTSYPELPPKRVKHLLVELYCSTKKAVLGDMLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALI-------------SAKAAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLH 368
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.340e-75 Identity = 120/163 (73.62%), Postives = 144/163 (88.34%), Query Frame = 1
Query: 319 RVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
+VKHYAPS Q KAS +LFT+F++ LAE+GI +SDLAGGTTDSGSD+KAMC N LLA + ++WDWC CHLAD+AAE AFGTSADPQKSKNK+AR+VV L+IK+AAKVNQS FKQKFDEAQ+++L ETLKI++HAPQRWLSLVRV+ERIIRLWHVLRK++
Sbjct: 81 QVKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRKLF 243
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE) HSP 1 Score: 229 bits (583), Expect = 2.800e-70 Identity = 116/238 (48.74%), Postives = 166/238 (69.75%), Query Frame = 1
Query: 1 MLVDRFLPFSFFSSTPSWQELSGVLTADEVPFSPLSARRVKHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLL--RVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKE 708
+LV++ LP SFFSS + L ++ + P PL RRVKH++ E+Y+ATKK VVGNM EE++KA +P++H+ +D+WT K SG K+LG+H++YV ++F+++H LL VK Y+P A + +ASE+L I ++ L E G++ SDLA GTTDSGSDVKA+ VN L Y + W+WC CH+ KAAE AFG DP KSKN AR+V+K+VIK +N+S+ + KF++ Q +LL E
Sbjct: 43 LLVEKLLPVSFFSSGDELRTLLALIGDSDFP--PLRPRRVKHLLTELYVATKKVVVGNMLEEVRKAPLPVLHHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACHMMVKAAEQAFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSYLRAKFEDLQTELLGE 278
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 233 bits (595), Expect = 3.440e-69 Identity = 115/211 (54.50%), Postives = 151/211 (71.56%), Query Frame = 1
Query: 175 MQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
M EE++ A +PI+H+ +D+W K SG K+LG+HVFYV +NF+L+ LL +K Y PS +A + KA+E+L I +A L E+G SDLA GTTDSGSDVK++ VN L Y + W+WC CHL KAAE+AFGT DPQKSKN EA ++K +I +++S KF++ Q+DLL E LKI APQRWL+LVR MER+IRLWHVLRK+Y
Sbjct: 1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLY 211
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 209 bits (532), Expect = 9.720e-63 Identity = 114/243 (46.91%), Postives = 151/243 (62.14%), Query Frame = 1
Query: 79 ADEVPFSPLSARRVKHVVVEMYLATKKKVVGNMQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
A P+ L A RVK ++VEMY+ATKK V+ NM EE+K A +PI+H+ +D+WT K SG K L E G +L I +A L E+G+ SDLA GT DSGSDVK++ N L + + W+WC CHL KAAE+ FGT DPQKSKN EAR+++K +I +++S+ FK KFD+ Q+D+L E LKI AP+RWL+LVR +ER+IRLWHVLRK+Y
Sbjct: 10 AGNTPYPELPAERVKDLLVEMYIATKKAVMSNMLEEVKNAPLPILHHMIDIWTDKGSGRKTLW--------------------------ERPRPG----VLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLY 222
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 207 bits (527), Expect = 1.800e-60 Identity = 108/211 (51.18%), Postives = 145/211 (68.72%), Query Frame = 1
Query: 175 MQEEIKKATMPIIHYGLDLWTCKLSGLKYLGIHVFYVDSNFQLRHVLLRVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
M EE++ A +PI+H+ +D+W K SG K+LG+HVFYV +NF+L+ LL +A + KA+E+L I +A L E+G+ SDLA GTTDSGSDVK++ VN L Y + W+WC CHL KAAE+AFGT DPQ SKN EAR ++K +I +++S KF++ Q+DLL E L I APQRWL+LVR MER+IRLW V+RK+Y
Sbjct: 1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSN-LTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLY 202
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 185 bits (470), Expect = 6.080e-52 Identity = 91/163 (55.83%), Postives = 119/163 (73.01%), Query Frame = 1
Query: 319 RVKHYAPSVEAQEQGKASEILFTIFQATLAEYGINVSDLAGGTTDSGSDVKAMCVNILLALYQIWWDWCDCHLADKAAENAFGTSADPQKSKNKEAREVVKLVIKSAAKVNQSTTFKQKFDEAQLDLLKETLKITKHAPQRWLSLVRVMERIIRLWHVLRKVY 807
++K Y+PS +A + ASE+L IF++ L E+G+ SDLA GTTDSGSDVK+ VN L Y + W+WC CHL KAAE+ FGT DPQKSKN EAR+++K VI +N+S+ FK KF++ Q+DLL + LKI APQRWL+ VR +ER+IRLWHVLRK+Y
Sbjct: 9 QIKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLY 171 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22916.6129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22916.6129.1 >prot_H-paniculata_contig22916.6129.1 ID=prot_H-paniculata_contig22916.6129.1|Name=mRNA_H-paniculata_contig22916.6129.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp MLVDRFLPFSFFSSTPSWQELSGVLTADEVPFSPLSARRVKHVVVEMYLAback to top mRNA from alignment at H-paniculata_contig22916:174..1840- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22916.6129.1 ID=mRNA_H-paniculata_contig22916.6129.1|Name=mRNA_H-paniculata_contig22916.6129.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1667bp|location=Sequence derived from alignment at H-paniculata_contig22916:174..1840- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22916:174..1840- >mRNA_H-paniculata_contig22916.6129.1 ID=mRNA_H-paniculata_contig22916.6129.1|Name=mRNA_H-paniculata_contig22916.6129.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at H-paniculata_contig22916:174..1840- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |