prot_H-paniculata_contig22815.6090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22815.6090.1
Unique Nameprot_H-paniculata_contig22815.6090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
BLAST of mRNA_H-paniculata_contig22815.6090.1 vs. uniprot
Match: D8LMY9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMY9_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 6.510e-53
Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 0
Query:    1 MSPGMDVSLFDCFSDPTGCLVTYFCGCVVSGFNAARVDDRECVPCDIFSNDYQTRQAMRAKYDMGFAPAPDFFSMFCCRFCFIMQTAKEIALKRGDEPVYFGEVSMN 107
            MSPGM+ SLFDCFSDP GC+++  CGC V+GF AARVDDREC  CD FSN YQ RQ++RAKYDMGFAP PDF S++ C  CFIMQ AKE+AL++GDEPVYFGEV MN
Sbjct:   27 MSPGMETSLFDCFSDPVGCIMSCCCGCFVAGFTAARVDDRECNLCDAFSNSYQVRQSLRAKYDMGFAPLPDFVSLYFCGCCFIMQNAKEVALQKGDEPVYFGEVGMN 133          
BLAST of mRNA_H-paniculata_contig22815.6090.1 vs. uniprot
Match: A0A6U1MVS5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MVS5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.350e-26
Identity = 46/111 (41.44%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 MSPGMDVSLFDCFSDPTGCLVTYFCGCVVSGFNAARVDDRECVPCD-IFSNDYQTRQAMRAKYDMGFAPAPDFFSMFCCRFCFIMQTAKEIALKRGDEPVYFGEVSMNVMG 110
            ++PG +  LF C +DP GC+++  CG +V+ F  A V++REC PCD +  + + TRQ +R KY +G+    DF + + C  C + Q A+E+A K+G EPV+FG V  N+ G
Sbjct:   13 LTPGFNEPLFGCMNDPMGCVLSCCCGGIVNAFTQAEVEERECTPCDCLMGSAWFTRQTIRTKYSLGYNEIMDFVAAYFCGCCVVNQMAREVAKKKGKEPVWFGSVKTNLFG 123          
BLAST of mRNA_H-paniculata_contig22815.6090.1 vs. uniprot
Match: A0A6H5L3Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y3_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.530e-21
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 MSPGMDVSLFDCFSDPTGCLVTYFCGCVVSGFNAARVDDRECVPCDIFSNDYQTR 55
            MSPGM+ SLFDCFSDP GC+++  CGC+V+GF AARVDDREC  CD FSN YQ R
Sbjct:   27 MSPGMETSLFDCFSDPVGCIMSCCCGCIVAGFTAARVDDRECNLCDAFSNSYQAR 81          
BLAST of mRNA_H-paniculata_contig22815.6090.1 vs. uniprot
Match: A0A540KDY1_MALBA (Uncharacterized protein n=6 Tax=Maleae TaxID=721813 RepID=A0A540KDY1_MALBA)

HSP 1 Score: 50.1 bits (118), Expect = 6.540e-5
Identity = 34/105 (32.38%), Postives = 49/105 (46.67%), Query Frame = 0
Query:    9 LFDCFSDPTGCLVTYFCGCVVSGFNAARVDDRE--------------CV---PCDIFSNDYQTRQAMRAKYDMGFAPAPDFFSMFCCRFCFIMQTAKEIALKRGD 96
            LFDCFSDP  C +T++C C+  G  A  VD                 CV   PC I+S  Y+++  MR +Y +  +P  D     CC  C + Q  +E+  +  D
Sbjct:   74 LFDCFSDPKNCCITFWCPCITFGQIAEIVDKGSISCGASGALYTLIACVTAFPC-IYSCFYRSK--MRQQYSLEESPCGDCLVHCCCEGCALCQEYRELKFRGFD 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22815.6090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LMY9_ECTSI6.510e-5371.96Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6U1MVS5_9STRA1.350e-2641.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H5L3Y3_9PHAE3.530e-2170.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A540KDY1_MALBA6.540e-532.38Uncharacterized protein n=6 Tax=Maleae TaxID=72181... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006461PLAC8 motif-containing proteinTIGRFAMTIGR01571TIGR01571coord: 8..90
e-value: 2.0E-12
score: 45.7
IPR006461PLAC8 motif-containing proteinPFAMPF04749PLAC8coord: 8..89
e-value: 8.0E-14
score: 52.4
IPR006461PLAC8 motif-containing proteinPANTHERPTHR15907FAMILY NOT NAMEDcoord: 8..97
NoneNo IPR availablePANTHERPTHR15907:SF148coord: 8..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22815contigH-paniculata_contig22815:285..623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22815.6090.1mRNA_H-paniculata_contig22815.6090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22815 240..863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22815.6090.1 ID=prot_H-paniculata_contig22815.6090.1|Name=mRNA_H-paniculata_contig22815.6090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
MSPGMDVSLFDCFSDPTGCLVTYFCGCVVSGFNAARVDDRECVPCDIFSN
DYQTRQAMRAKYDMGFAPAPDFFSMFCCRFCFIMQTAKEIALKRGDEPVY
FGEVSMNVMGDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006461PLAC_motif_containing