mRNA_H-paniculata_contig22809.6088.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22809.6088.1
Unique NamemRNA_H-paniculata_contig22809.6088.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 4.880e-49
Identity = 119/303 (39.27%), Postives = 169/303 (55.78%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDESKEGN-----SETAAGGSTGELETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTLAEDQVP----S*QTSSAEVPVKAR---EDLLSEWRRVI---KDKALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FLT RAV +LV +  K G      S    G    +LE L +  WLR+ S R+P+ D+ILV  KCDL      +A +  +R+E AC  WL+ +  +G + V +E   SLTSC   G   H  SS      G    K GW CDWR   AD +  PSL++R++ K  G  +R  +MVLP+SW  AL+ L     G R  V + L +   P    + +T+  E  +      EDL  +W+  +   +   +TV N ++ALEGAL IRE++G+++    ++FLDV WLAK+L+P+LNHK
Sbjct:  253 VAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAG---GNAGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESS-----TGSHELKGGWACDWRD-MADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHG-RDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHK 545          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.740e-44
Identity = 112/302 (37.09%), Postives = 166/302 (54.97%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDESK-----EGNSETAAGGSTGELETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTLA---EDQVPS*QTSSAEVPVKAR---EDLLSEWRRVIKD---KALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FLT R+V +LV +  +       ++         +LE L +  WLR+ S R+P  D+ILV  KCDL + + +   Q   R+E AC  WL+ +  +G  +V +E+  SLTSC   G   H  S       G    KQGW CDWR    D   P SL+ R++ K     +R  +MVLP+SW  AL+FL     G RH V + +    +    + +T+     V      E+L + W+  + +   + +TV N E+ALEGAL+IRE++G+++    +VFLDV WLA++L+P+LNHK
Sbjct:  233 VAYTGLLQMFLTPRSVCVLVCNAGEFRQQLGSDNIDQVEEDCRKLEGLRVCDWLRSISCRVPGNDVILVATKCDLVNGNVEETGQ---RIEHACRTWLSSWVRNGMDSVRLERHVSLTSCFPIGASEHGESR-----RGNHALKQGWACDWRDVEGDMSSP-SLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYG-RHPVEMVMLKSPDSDSGATETAGGTTTVYQGITVEELSARWQGTVDELGRRGITVTNAENALEGALSIREFDGSLVCHEKFVFLDVVWLARILKPLLNHK 524          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 2.340e-43
Identity = 114/305 (37.38%), Postives = 167/305 (54.75%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDESKEGNS-ETAAGGSTGE----LETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSC--ARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTLAE----DQVPS*QTSSAEVPVKAR---EDLLSEWRRVIKD---KALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FLT R+V +LV + +  G   E    G   E    LE L +  WLR+ S R+P  D+ILV  KCDL      +A +   RVE AC  WL+ +   G + V +E   S TSC  A GG    V +          G K  W CDW   + D+  PPSL++R++ K  G  +R  +MVLP+SW   L  L     G R  V + L +    D+  + +T+     V      EDL  +W++++ +   + + V N ++ALEGAL+IRE++G+++   ++VFLDV WLA++L+P+LNHK
Sbjct:  203 VAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAG---GNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPAEGGQHGEVGTENH-------GSKGDWACDWHDMK-DDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQG-RDPVEVVLRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHK 495          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 2.440e-43
Identity = 117/308 (37.99%), Postives = 165/308 (53.57%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDESKEGNSETAAGGST------GELETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTL-----------AEDQVPS*QTSSAEVPVKAREDLLSEWRRVI---KDKALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FL+ RAV LLV D    G  +     S        +L+ L +  WLR+ SFR+PD D+++V  KCDL +        AA R+E A  EWL  +S +G  AV VE   SLTSC          ++L  G          W CDWR G + E +P SL++R++    G+ VR   +VLP+SW+ AL  L D  G  R+ V               A + VP+    +  V    R DL ++W  V+   +   ++V  P+ ALEGAL IRE+EG+++   +YVFLDV WLA++L+P+LNH+
Sbjct:  343 VAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAA---GMGTDAAGRIEGAIGEWLESWSGAGMNAVHVEDGVSLTSCFPPTPNEDGGAAL--GKRKSPDEDSTWACDWREGVSVESQP-SLLHRVMYNSKGN-VRGASLVLPRSWNIALEVL-DALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHR 642          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 4.530e-43
Identity = 113/305 (37.05%), Postives = 169/305 (55.41%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDESKEGNSETAAGGSTGE------LETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRP-PSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTLAEDQVPS*QTSSAEVPVKAR-------EDLLSEWRRVIKD---KALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FLT R+V +LV +  + G    +      E      LE L +  WLR+ S R+PD D+ILV  KCDL      +A +  SR+E++C  WL+ +  +G + V +E    LTSC       H   S     AG   +K GW CDWR    ++D+P PS ++R++ K  G  +R  +MVLP+SW  AL+ L     G R  V + L +   P  +    E   KA        E+L ++W+  + +   + +TV N  +ALEGAL+IRE++G+++    +VFLDV WL+++L+P+LNHK
Sbjct:  467 VAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVG---GNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERS-----AGNHVWKGGWACDWRN--VEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHG-RDPVEVVLRKSPEPD-RGDETETGGKADVYQGITVEELGTKWQETVDELERRGITVTNMMNALEGALSIREFDGSLVRHEKFVFLDVVWLSRILKPLLNHK 759          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 5.750e-43
Identity = 114/304 (37.50%), Postives = 162/304 (53.29%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDESKEGNSETAAGGSTGE-----LETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTLAEDQVPS*QTSSAEVPVKAR--------EDLLSEWRRVIKD---KALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FLT R+V +LV +  + G    +      E     L+ L +  WLR+ S R+P  D+ILV  KCDL S    +A +   R+E AC  WL+ +  +G   V +E   SLTSC   G   H  S+      G    KQGW CDWR    D+  P SL+ R++ K     +R  +MVLP+SW  AL+ L     G R  V + L +   P  +    E  V           E+L + WR  + +   + + V N E+ALEGAL+IRE++G+++    +VFLDV WLA++L+P+LNHK
Sbjct:  184 VAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVS---GNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESN-----TGSDASKQGWACDWRHVEGDKSSP-SLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHG-RDPVEMVLLKS--PDSERRPTETGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHK 475          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.530e-42
Identity = 109/303 (35.97%), Postives = 160/303 (52.81%), Query Frame = 1
Query:    4 AYYGLLQLFLTRRAVYLLVWDESKEGNSETA-AGGSTGE----LETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGF--KQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLS------DPSGGERHTVPLTLAEDQVPS*QTSSAEVPVKAREDLLSEWRRVIKDKA---LTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            AY GLLQ+FLT R+V +LV +    G       GG   E    LE L +  WLR+ + R+PD D ILV  KCDL      +A +   R+E AC  WLA +  +G + V +E    LTSC    +  H       G  G      + GW CDWR G   +D  P L++R++ K  G  +R  ++VLP+SW  AL+ L       DP     H +      D       ++        EDL+++W   + + A   +TV + ++ALEGAL+IRE++G+++   ++VFLDV WLA++L+P+LNHK
Sbjct:  326 AYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGGQIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVG---GNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRFGEH-------GERGTANHTVEGGWVCDWR-GHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEALESGRDPVEVVMHKLGNVGRGDAAEMTAANAGGYQGITVEDLIAKWLETVDELARREITVTSAKNALEGALSIREFDGSLVRHETFVFLDVVWLARILKPLLNHK 617          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 4.730e-42
Identity = 114/322 (35.40%), Postives = 169/322 (52.48%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDESKEG---NSETAAG--GSTGELETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSS-------------------GGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTLAEDQVPS*QTSSAEVPVKAR-------EDLLSEWRRVIKD---KALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FLT R+V +LV +  + G   +SE   G  G   +LE L +  WLR+ S R+PD D+ILV  KCDL      +A +  SR+E AC  WL+ +  +                   G + V +E    LTS        H   S     AG  G K GW CDWR    D+  PPS ++R++ K  G  +R  + VLP+SW  AL+ L     G R  V   L +   P  + ++     K         E+L ++W+  + +   + +TV N ++ALEGAL++RE++G+++   ++VFLDV WLA++L+P+LNHK
Sbjct:   69 VAYTGLLQMFLTPRSVCVLVCNAGEFGQRRDSEHCGGVEGDCRKLEELRVCDWLRSISRRIPDNDVILVATKCDLAG---GNAREIGSRMEKACRTWLSGWVRNAXXXXXXXXXXXXXXXXXXGMQPVRLEPHVCLTSSLPVRVDEHGDRS-----AGNHGSKGGWACDWRD-EEDDQPPPSFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHG-RDPVEAVLGKSPDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHK 380          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 9.660e-42
Identity = 111/308 (36.04%), Postives = 163/308 (52.92%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDES----KEGNSETAAGGSTGE----LETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTLAEDQVPS*QTSSAEVPVKAR---------EDLLSEWRRV---IKDKALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FLT RAV ++V +      + G  ET  GG   E    LE L +  WLR+ S R+PD D+ILV  KCD       +A +   R+E A   WLA +  SG + V +E    LTSC           S           + GW CDWR G+ D++  PSL++R++ K  G  +R  +MV+P+SW  AL+ L      ER   P+ +  + +       A      +         EDL ++W+     +  + +TV N ++ALEGAL IRE++G+++   ++VFLDV WLA++L+P+LNHK
Sbjct:  396 VAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCET--GGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVG---GNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERS-----TRNQAMEGGWTCDWRDGK-DDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLE---ALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHK 689          
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 9.780e-42
Identity = 111/299 (37.12%), Postives = 159/299 (53.18%), Query Frame = 1
Query:    1 VAYYGLLQLFLTRRAVYLLVWDESKEGNSETAAGGSTGE-----LETLGILPWLRAFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSGGRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGRADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHTVPLTLAEDQVPS*QTSSAEVPVKAR---EDLLSEWRRVIKD---KALTVPNPESALEGALTIREYEGTVLSLGSYVFLDVGWLAKVLEPVLNHK 864
            VAY GLLQ+FLT R+V +LV +  + G    +      E     LE L +  WLR+ S R+PD ++ILV  KCDL      +A +   R+E AC  WL+ ++     +V +E    LTSC   G   H  SS    L+     K  W CDWR     E  P SLI R++ K     +R  +MVLP+SW  AL+FL     G      + L         T +A+  V      E+L ++W+  +     + +TV N E+ALEGAL+IRE++G+++    +VFLDV WLA++L+P+LNHK
Sbjct:  404 VAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAG---GNAWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLS-----KSCWACDWRDVGGGEPSP-SLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVEMVILKSPDSDRGATETAKTTVYQGITVEELSAKWQETVDGLGRRGITVTNAENALEGALSIREFDGSLVPHEKFVFLDVVWLARILKPLLNHK 693          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22809.6088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSZ8_9PHAE4.880e-4939.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L650_9PHAE1.740e-4437.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G431_ECTSI2.340e-4337.38LRR-GTPase of the ROCO family, incomplete sequence... [more]
D7FL98_ECTSI2.440e-4337.99LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LF46_ECTSI4.530e-4337.05LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FZA1_ECTSI5.750e-4337.50LRR-GTPase of the ROCO family, incomplete sequence... [more]
D7FUC3_ECTSI1.530e-4235.97LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K1K4_9PHAE4.730e-4235.40Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FUD0_ECTSI9.660e-4236.04LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI9.780e-4237.12LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22809contigH-paniculata_contig22809:1415..3924 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score116.7
Seed ortholog evalue1.3e-23
Seed eggNOG ortholog2880.D8LF46
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
KEGG koko:K01188
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003002,GO:0003006,GO:0003674,GO:0004857,GO:0007275,GO:0007389,GO:0008150,GO:0009791,GO:0009908,GO:0022414,GO:0030234,GO:0032501,GO:0032502,GO:0043086,GO:0044092,GO:0048367,GO:0048608,GO:0048731,GO:0048832,GO:0048833,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0061458,GO:0065007,GO:0065009,GO:0090567,GO:0098772
EggNOG OGs2CYK8@1,2S4YE@2759
EC3.2.1.21
CAZyGH1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons3
Model size867
Cds size639
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22809.6088.1prot_H-paniculata_contig22809.6088.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22809 1415..2190 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929635.7581394-CDS-H-paniculata_contig22809:1414..20071622929635.7581394-CDS-H-paniculata_contig22809:1414..2007Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22809 1415..2007 +
1691480945.4909937-CDS-H-paniculata_contig22809:1414..20071691480945.4909937-CDS-H-paniculata_contig22809:1414..2007Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22809 1415..2007 +
1622929635.7698872-CDS-H-paniculata_contig22809:2144..21901622929635.7698872-CDS-H-paniculata_contig22809:2144..2190Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22809 2145..2190 +
1691480945.5025764-CDS-H-paniculata_contig22809:2144..21901691480945.5025764-CDS-H-paniculata_contig22809:2144..2190Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22809 2145..2190 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929635.7813578-UTR-H-paniculata_contig22809:2190..23211622929635.7813578-UTR-H-paniculata_contig22809:2190..2321Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22809 2191..2321 +
1691480945.5115047-UTR-H-paniculata_contig22809:2190..23211691480945.5115047-UTR-H-paniculata_contig22809:2190..2321Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22809 2191..2321 +
1622929635.7997384-UTR-H-paniculata_contig22809:3829..39241622929635.7997384-UTR-H-paniculata_contig22809:3829..3924Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22809 3830..3924 +
1691480945.5213256-UTR-H-paniculata_contig22809:3829..39241691480945.5213256-UTR-H-paniculata_contig22809:3829..3924Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22809 3830..3924 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22809.6088.1

>prot_H-paniculata_contig22809.6088.1 ID=prot_H-paniculata_contig22809.6088.1|Name=mRNA_H-paniculata_contig22809.6088.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp
VAYYGLLQLFLTRRAVYLLVWDESKEGNSETAAGGSTGELETLGILPWLR
AFSFRLPDGDIILVGNKCDLRSRSQDSAVQAASRVESACCEWLARFSSSG
GRAVSVEKVASLTSCARGGWWRHVVSSLFWGLAGIVGFKQGWPCDWRTGR
ADEDRPPSLINRIIRKGPGDSVRAEKMVLPQSWSFALSFLSDPSGGERHT
VPLTLAEDQVPS*
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mRNA from alignment at H-paniculata_contig22809:1415..3924+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22809.6088.1 ID=mRNA_H-paniculata_contig22809.6088.1|Name=mRNA_H-paniculata_contig22809.6088.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2510bp|location=Sequence derived from alignment at H-paniculata_contig22809:1415..3924+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGCCTACTATGGCCTCCTTCAGCTGTTCTTAACGCGCCGAGCGGTGTA TCTCCTGGTGTGGGATGAAAGTAAGGAAGGGAACAGTGAAACAGCCGCGG GTGGGAGCACGGGCGAGCTTGAGACACTGGGTATCCTCCCGTGGCTGCGA GCGTTTTCTTTCCGCCTTCCGGATGGTGACATCATCCTCGTCGGTAACAA GTGCGATTTACGCTCCCGTTCACAGGACTCGGCAGTCCAAGCGGCCTCGA GGGTAGAGTCTGCTTGCTGCGAGTGGCTGGCTCGGTTTTCTTCGTCGGGT GGCCGCGCAGTCAGTGTTGAGAAGGTCGCAAGCCTCACCAGTTGTGCTCG TGGTGGTTGGTGGCGACATGTCGTGTCCAGCTTGTTTTGGGGTCTAGCGG GGATAGTGGGGTTCAAACAAGGGTGGCCTTGTGATTGGCGCACAGGGAGG GCGGATGAGGATAGGCCCCCGAGCCTTATCAACCGCATCATCCGCAAGGG TCCGGGTGACTCCGTGCGGGCAGAGAAAATGGTGTTGCCACAAAGTTGGA GCTTTGCCCTGTCATTTCTCAGCGACCCGAGCGGGGGCGAAAGGTGTGTG CGCGTTTGTTGATGGTTAGGTGATATCTTTGAATGGGGCTCCCAGCTGTG GCTTTGATGATAGTTTCACGTGTTCGTGTTGTAACCTCGCCTACTCATGG GTAGTCATCACTTTCCACCACCATTTGCAGGCACACTGTCCCTTTAACGT TGGCGGAAGATCAAGTGCCATCATAGCAGACGTCGAGCGCCGAAGTCCCC GTCAAGGCGCGCGAGGACCTGCTAAGTGAGTGGAGGCGTGTGATTAAAGA CAAAGCGCTGACTGTCCCGAACCCCGAGAGCGCGTTGGAAGGGGCGCTTA CCATCAGGTCTGATTTAAGTTCATGTCATGGGTACCGTACGTGGATAGGG TATCAATCTATGAAGGATATAGACACAATTAATTATCTATTCAGTTGAGC CTGACGCCGCGCAAAGGTCCAATGGCGCTGTACCGGGTGATGTGGGAATT GCGCCGCACTGTAGGAACAAGCTCGGGCGATGGTCAAAGTACACCACGGA GCAGCCTAAATCCAAATATGTGCAATTTCGAGCTTTTACCTAGGCAAGGG GCATATGATATACACGGAACAGGTAGTTTTTCCAACCGCGACCGAGAAAA TGGCAAAAAAATGGTTGTTTGGTCGTTTTCTGTGTGATGCCTTTTACTCG ACAACTCCCGATGAATACATTGAAACGTGCGACAAATGGTTACTCTTCTC CACTACTAGAAGCGTGCGTTTTTCTTATTTTCGAGAAACCCTCGTTGTCG AGACAGCGCCGTATTTTTGTTGTCATATTTTGGAACCAAACGCAGGGTAT GCCCTAGAACTTGTCCCCGGAGTAACATGTCAAAACGGCAAGCCAGGAAA TCCACTCGAACGTTTTGAAGCGTTCCAAGTCGTGCGTCCGTTTGCTGCGC ATTATTTATGTGAGTTCGGCTTGCTCGAAGTGATTTCAATGCTTCGACGA GTGAACCTCACCTTCGTGGGATGCTTTACCGGCAGAACGACAAGGGGGAA ACTGTAACTTCTGCACACGACGTGTCCAGACACGATAACCTCTGCTCTGC GTTGTCCAAATCTGACCAGAGTGGTCAGCCACTGTCGTAAGCTAATTGTC TCATATTCTGTCAGTACCGTAGCGAACAAGCAAAGTGATCAGCTGCTGCG TGAACGATACTATATATCAAGCGTGTACTGTGCACATTTTACTTTTGGTC ATGAGTTGCGATGGGATGGCGTAACGGGTCTGATACTGGGTCGTAGTTAC GCAAGTCCTTGTAGCAAATTACCGTATTAAACAGCTTCGATTCACGTGAT GAAGGTTGAACAAGCCCAGCTACGGTGATCCAGTTTCCCTGTACATGCCT CCATTCCGGTTACTAGCATCGCGCGACGGTTGCTCATGATGGATGCTCCG ATTTGTACCTGCTCGTTCCGTTGCCAAGAGTCATCAGATATTTTGGAACA GGTGTCGTTTAGAACGGTATTGCACAATTCCTTTGGTGTCAAATACGTGG ACCTTGAACGGCTGCAGTATGGGCACATGATACAACTATCCGTTGAAGTT TGAGAATGAATGGAAGCTGTGACCGATTTCCTTCATGTACCCCCGCTGCG TACATGTGGTTCCATATGTGTAGGCAGTATCGTCAACAGAGAAGTGGCTC GATCGAGATCGAATCTGCGCTGGCACTCTGTCGCGGACACTGTTGCATGT CCATTTTTGACTGCATATATGCGAGTCGGGGTTGATGGCATCGGATATTA TTAATTACACATTCCTCTGGATTTGTGTGGAATATCTAATTTTGGAAACT TCTTTGCTACCGCAGGGAATACGAGGGGACAGTGCTGTCGCTCGGAAGTT ACGTTTTCCTCGATGTAGGCTGGTTGGCGAAGGTGCTCGAGCCGGTGCTG AATCACAAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig22809:1415..3924+

>mRNA_H-paniculata_contig22809.6088.1 ID=mRNA_H-paniculata_contig22809.6088.1|Name=mRNA_H-paniculata_contig22809.6088.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1278bp|location=Sequence derived from alignment at H-paniculata_contig22809:1415..3924+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGCCTACTATGGCCTCCTTCAGCTGTTCTTAACGCGCCGAGCGGTGTA
TCTCCTGGTGTGGGATGAAAGTAAGGAAGGGAACAGTGAAACAGCCGCGG
GTGGGAGCACGGGCGAGCTTGAGACACTGGGTATCCTCCCGTGGCTGCGA
GCGTTTTCTTTCCGCCTTCCGGATGGTGACATCATCCTCGTCGGTAACAA
GTGCGATTTACGCTCCCGTTCACAGGACTCGGCAGTCCAAGCGGCCTCGA
GGGTAGAGTCTGCTTGCTGCGAGTGGCTGGCTCGGTTTTCTTCGTCGGGT
GGCCGCGCAGTCAGTGTTGAGAAGGTCGCAAGCCTCACCAGTTGTGCTCG
TGGTGGTTGGTGGCGACATGTCGTGTCCAGCTTGTTTTGGGGTCTAGCGG
GGATAGTGGGGTTCAAACAAGGGTGGCCTTGTGATTGGCGCACAGGGAGG
GCGGATGAGGATAGGCCCCCGAGCCTTATCAACCGCATCATCCGCAAGGG
TCCGGGTGACTCCGTGCGGGCAGAGAAAATGGTGTTGCCACAAAGTTGGA
GCTTTGCCCTGTCATTTCTCAGCGACCCGAGCGGGGGCGAAAGGTTGCCT
ACTATGGCCTCCTTCAGCTGTTCTTAACGCGCCGAGCGGTGTATCTCCTG
GTGTGGGATGAAAGTAAGGAAGGGAACAGTGAAACAGCCGCGGGTGGGAG
CACGGGCGAGCTTGAGACACTGGGTATCCTCCCGTGGCTGCGAGCGTTTT
CTTTCCGCCTTCCGGATGGTGACATCATCCTCGTCGGTAACAAGTGCGAT
TTACGCTCCCGTTCACAGGACTCGGCAGTCCAAGCGGCCTCGAGGGTAGA
GTCTGCTTGCTGCGAGTGGCTGGCTCGGTTTTCTTCGTCGGGTGGCCGCG
CAGTCAGTGTTGAGAAGGTCGCAAGCCTCACCAGTTGTGCTCGTGGTGGT
TGGTGGCGACATGTCGTGTCCAGCTTGTTTTGGGGTCTAGCGGGGATAGT
GGGGTTCAAACAAGGGTGGCCTTGTGATTGGCGCACAGGGAGGGCGGATG
AGGATAGGCCCCCGAGCCTTATCAACCGCATCATCCGCAAGGGTCCGGGT
GACTCCGTGCGGGCAGAGAAAATGGTGTTGCCACAAAGTTGGAGCTTTGC
CCTGTCATTTCTCAGCGACCCGAGCGGGGGCGAAAGGCACACTGTCCCTT
TAACGTTGGCGGAAGATCAAGTGCCATCATAGGCACACTGTCCCTTTAAC
GTTGGCGGAAGATCAAGTGCCATCATAG
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