mRNA_H-paniculata_contig22779.6066.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: D7FM94_ECTSI (P-type ATPase (PMID 12707717) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM94_ECTSI) HSP 1 Score: 125 bits (315), Expect = 1.370e-36 Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 1
Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPETALR 204
MSFA+SYLFYKSVSWAVPLF+YAF+NGLSGQ FYD+VNS +WALLYTGLPIVL GVYDMDVLP TALR
Sbjct: 1 MSFATSYLFYKSVSWAVPLFVYAFFNGLSGQFFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALR 68
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: A0A0L0H983_SPIPD (Phospholipid-transporting ATPase n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H983_SPIPD) HSP 1 Score: 58.9 bits (141), Expect = 1.670e-8 Identity = 23/59 (38.98%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 25 FYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPETAL 201
F K+V W + LF Y F+ G S Q YD+ + ++ +++TGLP+++ GV+D D+ P + L
Sbjct: 965 FVKNVVWVMVLFWYQFYAGFSAQSVYDFTYTLLYNIVFTGLPVIMIGVFDQDLSPRSIL 1023
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: F0WPS0_9STRA (Phospholipid-transporting ATPase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WPS0_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 5.820e-8 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPETALR 204
MS Y+FYK++ + F Y F++G SGQ FY ++ +YT LPI++ GV+DMDV P T R
Sbjct: 959 MSVLVGYMFYKNILMVLAQFYYTFYSGASGQKFYSEFYFQLYNAMYTTLPILVLGVFDMDV-PWTISR 1025
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: A0A6S7INZ2_PARCT (Phospholipid-transporting ATPase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7INZ2_PARCT) HSP 1 Score: 57.0 bits (136), Expect = 7.760e-8 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 19 YLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPET 195
Y FYK+V + +P +LYAF+N S Q Y V T + + +T LPI+L+G+++ + P+T
Sbjct: 330 YFFYKNVVFTIPQYLYAFFNAYSQQTLYQSVFLTTFNICWTSLPILLYGIFEQHLRPDT 388
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: C4LW20_ENTHI (Phospholipid-transporting ATPase n=8 Tax=Entamoeba TaxID=5758 RepID=C4LW20_ENTHI) HSP 1 Score: 57.0 bits (136), Expect = 7.930e-8 Identity = 25/67 (37.31%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPETAL 201
+S+ Y FYK++ + F + F+NG SG ++ +++ +L+T LPI++FG++D DVLPET +
Sbjct: 834 LSYVILYSFYKNIVMYLTQFSFLFFNGYSGTSLFENWTLSIYNVLFTLLPIIVFGIFDRDVLPETLI 900
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: T2M336_HYDVU (Phospholipid-transporting ATPase n=6 Tax=Hydra vulgaris TaxID=6087 RepID=T2M336_HYDVU) HSP 1 Score: 57.0 bits (136), Expect = 7.940e-8 Identity = 23/61 (37.70%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 19 YLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPETAL 201
Y FYK++++ P F++ +NG SGQ Y V T + +L+T +PI+L+G+++ D+ ET +
Sbjct: 852 YFFYKNIAFITPQFIFQMYNGYSGQPLYAGVFLTTFNILFTSMPILLYGIFEKDLKEETLM 912
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: A0A024GGU9_9STRA (Phospholipid-transporting ATPase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGU9_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 7.960e-8 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDV 183
MS Y+FYK++ + F Y F++G SGQ FY ++ +YT LPI++ GV+DMDV
Sbjct: 961 MSVLVGYMFYKNILMVLAQFYYTFYSGASGQKFYSEFYFQLYNAMYTTLPILVLGVFDMDV 1021
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: A0A507F1B5_9FUNG (P-type phospholipid transporter n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F1B5_9FUNG) HSP 1 Score: 55.8 bits (133), Expect = 2.040e-7 Identity = 22/59 (37.29%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 25 FYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPETAL 201
F K+V W + LF Y F+ G S Q YD+ + ++ +++TGLP+++ GV+D D+ + L
Sbjct: 1491 FVKNVVWVMVLFWYQFYAGFSAQSVYDFTYTLLYNIVFTGLPVIMLGVFDQDLSSRSIL 1549
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: Q54L55_DICDI (Phospholipid-transporting ATPase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54L55_DICDI) HSP 1 Score: 54.3 bits (129), Expect = 7.100e-7 Identity = 24/68 (35.29%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPETALR 204
+S Y F+K+++ + F +A N SG +YD +NS ++ L +T LPI++ GV+D D+ P+ L+
Sbjct: 923 LSLVICYFFFKNLASCLLQFWFAINNQFSGTTYYDSINSMLFNLTFTSLPIIVVGVFDRDLKPQFLLK 990
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Match: A0A7R9U359_9STRA (Phospholipid-transporting ATPase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U359_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 7.130e-7 Identity = 24/67 (35.82%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPIVLFGVYDMDVLPETAL 201
M+ A Y+FYK++ + + F AFWN +SGQ + + ++ + +TG+P++LFG++D DV +A+
Sbjct: 1066 MAKAVLYIFYKNLLFTMTNFWMAFWNLMSGQKYLIEASVQLYNVFFTGVPVLLFGIWDRDVKDTSAI 1132 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22779.6066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22779.6066.1 >prot_H-paniculata_contig22779.6066.1 ID=prot_H-paniculata_contig22779.6066.1|Name=mRNA_H-paniculata_contig22779.6066.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp MSFASSYLFYKSVSWAVPLFLYAFWNGLSGQVFYDYVNSTMWALLYTGLPback to top mRNA from alignment at H-paniculata_contig22779:651..1233- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22779.6066.1 ID=mRNA_H-paniculata_contig22779.6066.1|Name=mRNA_H-paniculata_contig22779.6066.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=583bp|location=Sequence derived from alignment at H-paniculata_contig22779:651..1233- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22779:651..1233- >mRNA_H-paniculata_contig22779.6066.1 ID=mRNA_H-paniculata_contig22779.6066.1|Name=mRNA_H-paniculata_contig22779.6066.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at H-paniculata_contig22779:651..1233- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |