mRNA_H-paniculata_contig22756.6062.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A7R9ZZ96_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7R9ZZ96_9DINO) HSP 1 Score: 76.3 bits (186), Expect = 1.230e-14 Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 31 YLPQPTFVPRKGAPENAPEDFGYLATFVVNGRDRVTELVILDAQKISKGPVCRLPLKGFIPHTLHG 228
+L +P + PR+GA ED GY+ + ++NGR + TE + DA I GP+CR+PL+ FIPH LHG
Sbjct: 254 FLGEPMYCPRRGAKTGEAEDDGYVVSILLNGRTKTTEFCVFDASNILTGPICRVPLRTFIPHALHG 319
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A7S3QIX9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIX9_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.010e-12 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 40 QPTFVPRKGAPENAPEDFGYLATFVVNGRDRVTELVILDAQKISKGPVCRLPLKGFIPHTLHG 228
+P F RK N ED GY+ + ++NG+++ +E+VILDA KIS+GPV R+PL IPH LHG
Sbjct: 519 EPMFAQRKSDASNGEEDDGYIISILLNGKEKKSEIVILDAAKISEGPVARVPLGVAIPHGLHG 581
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A7S4N2C8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N2C8_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.270e-12 Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 19 LPFFYLPQPTFVPRKGAPENAPE--DFGYLATFVVNGRDRVTELVILDAQ---KISKGPVCRLPLKGFIPHTLHG 228
LP ++ +P F P+ GA + PE D GY+ TFV NGRD T++VI D + + KGPV RLP+ +IP LHG
Sbjct: 98 LPHEFVGEPIFCPKAGADASQPECEDRGYVVTFVTNGRDLTTDMVIFDVEGKGALEKGPVARLPMPTYIPPGLHG 172
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A813FAK8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FAK8_POLGL) HSP 1 Score: 68.6 bits (166), Expect = 9.590e-12 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 40 QPTFVPRKGAPENAPEDFGYLATFVVNGRDRVTELVILDAQKISKGPVCRLPLKGFIPHTL 222
QP FVP+ GA E ED GYL T V +G + +E+V+LDAQ +SKGPVCR PL+ +PH L
Sbjct: 537 QPLFVPKPGAEE---EDAGYLLTVVFDGAAQSSEVVVLDAQAVSKGPVCRFPLQVALPHGL 594
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A7S2J5X0_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2J5X0_9DINO) HSP 1 Score: 68.2 bits (165), Expect = 1.300e-11 Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 40 QPTFVPRKGAPENAPEDFGYLATFVVNGRDRVTELVILDAQKISKGPVCRLPLKGFIPHTL 222
QP FVPR+G ED GYL T V++G R +E+V+LDA+K+S GPVCR+PL+ +PH L
Sbjct: 413 QPVFVPREG---REGEDDGYLLTLVLDGAARRSEVVVLDARKVSAGPVCRIPLEAPLPHGL 470
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A7S4N1Z6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1Z6_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.310e-11 Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 19 LPFFYLPQPTFVPRKGAPENAPE--DFGYLATFVVNGRDRVTELVILDAQ---KISKGPVCRLPLKGFIPHTLHG 228
LP ++ +P F P+ GA + PE D GY+ TFV NGRD T++VI D + + KGPV RLP+ +IP LHG
Sbjct: 526 LPHEFVGEPIFCPKAGADASQPECEDRGYVVTFVTNGRDLTTDMVIFDVEGKGALEKGPVARLPMPTYIPPGLHG 600
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A1L2D737_SCRTR (9-cis-epoxycarotenoid dioxygenase n=1 Tax=Scrippsiella trochoidea TaxID=71861 RepID=A0A1L2D737_SCRTR) HSP 1 Score: 66.6 bits (161), Expect = 4.530e-11 Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 TYLPTHLPFFYLPQPTFVPR-KGAPENAPEDFGYLATFVVNGRDRVTELVILDAQKISKGPVCRLPLKGFIPHTLHG 228
T++P P +L + FVPR E A ED GY+ + +GR R +EL++ DAQ ++ GP+CR+PL+G +PH LHG
Sbjct: 443 TWMPE--PHQFLGESLFVPRCTPDAEAAKEDDGYVVGLLFDGRARRSELLVFDAQSVATGPICRVPLRGQLPHGLHG 517
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: K9S6M5_9CYAN (Dioxygenase n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S6M5_9CYAN) HSP 1 Score: 61.2 bits (147), Expect = 3.570e-9 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 31 YLPQPTFVPRKGAPENAPEDFGYLATFVVNGRDRVTELVILDAQKISKGPVCRLPLKGFIPHTLHG 228
++ +P FVP+ P + ED G+L + V + + +ELVILDAQ++S GP+ RL LK +P+ LHG
Sbjct: 426 FISEPIFVPK---PSSQSEDDGWLLSMVYDSANHCSELVILDAQQVSAGPIARLRLKHHVPYGLHG 488
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A6P0K6Z2_9CYAN (Dioxygenase n=4 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0K6Z2_9CYAN) HSP 1 Score: 60.8 bits (146), Expect = 4.880e-9 Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 31 YLPQPTFVPRKGAPENAPEDFGYLATFVVNGRDRVTELVILDAQKISKGPVCRLPLKGFIPHTLHG 228
Y+ +P FVP+ P ED G++ T V + + +ELVILDA+ +S+GP+ RL LK IP+ LHG
Sbjct: 428 YVSEPVFVPK---PSGLQEDDGWVLTMVYDAQHHRSELVILDARDLSRGPIARLHLKHHIPYGLHG 490
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Match: A0A350X801_9CYAN (Dioxygenase (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11372 TaxID=2055768 RepID=A0A350X801_9CYAN) HSP 1 Score: 57.8 bits (138), Expect = 8.600e-9 Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 31 YLPQPTFVPRKGAPENAPEDFGYLATFVVNGRDRVTELVILDAQKISKGPVCRLPLKGFIPHTLHG 228
++ +P FVPR PE ED G+L T V + ++L ILDA+ +++GPV RL LK +P+ LHG
Sbjct: 60 FVSEPVFVPR---PEAMNEDDGWLLTLVYDSAHHRSDLAILDARDLNRGPVARLHLKHHVPYGLHG 122 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22756.6062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22756.6062.1 >prot_H-paniculata_contig22756.6062.1 ID=prot_H-paniculata_contig22756.6062.1|Name=mRNA_H-paniculata_contig22756.6062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp TYLPTHLPFFYLPQPTFVPRKGAPENAPEDFGYLATFVVNGRDRVTELVIback to top mRNA from alignment at H-paniculata_contig22756:238..468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22756.6062.1 ID=mRNA_H-paniculata_contig22756.6062.1|Name=mRNA_H-paniculata_contig22756.6062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=231bp|location=Sequence derived from alignment at H-paniculata_contig22756:238..468+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22756:238..468+ >mRNA_H-paniculata_contig22756.6062.1 ID=mRNA_H-paniculata_contig22756.6062.1|Name=mRNA_H-paniculata_contig22756.6062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig22756:238..468+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |