prot_H-paniculata_contig2273.6055.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2273.6055.1
Unique Nameprot_H-paniculata_contig2273.6055.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length186
Homology
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.440e-31
Identity = 66/178 (37.08%), Postives = 105/178 (58.99%), Query Frame = 0
Query:    3 YQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRD 180
            +Q I  SL+ L Q  R D+++ V Q  R   NP  +HM + K +LRYL+G P+L I Y +   F L+ F D+S+G    +  RST+G ++FL G ++ + +  Q + AQ+T EAEL  +S  A++ +Y+S  + E+G++ F  V I   + GAL +A    +  R+KH  +RF  LR+
Sbjct:   79 FQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGANP-DNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 254          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: Q9SHR5_ARATH (F28L22.3 protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SHR5_ARATH)

HSP 1 Score: 126 bits (317), Expect = 2.460e-30
Identity = 62/180 (34.44%), Postives = 115/180 (63.89%), Query Frame = 0
Query:    3 YQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRDWI 182
            Y + V S++      R D+A+ +   +R++  P S+H E+VK ++RYLKGA +L + ++++ +F +T +CD++Y   D ++ RS SG ++ + G  V + +SLQ ++A STTEAE I ++  AK+ M++ G+L+++G +    V+I+C ++ A+ L+    Y  R+KH  +RF  +RD +
Sbjct: 1137 YSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAA-DLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDK-VKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVV 1314          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 7.410e-30
Identity = 67/178 (37.64%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    3 YQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRD 180
            +QAI  SL+ L Q  R D+++ V Q  R   NP  +HM + K +LRYL+G P+L I Y +   F L+ F D+S+G    +  RST+G ++FL G ++ + +  Q + AQ+T EAEL  +S  A++ +Y+S  + E+G++ F  V I   + GAL +A    +  R+KH  +RF  LR+
Sbjct:  516 FQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GKFRLSCFTDSSFGANP-DNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 691          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: UPI001AD9288A (secreted RxLR effector protein 161-like n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD9288A)

HSP 1 Score: 119 bits (297), Expect = 9.990e-30
Identity = 69/179 (38.55%), Postives = 108/179 (60.34%), Query Frame = 0
Query:    3 YQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNF-ELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRD 180
            Y+ ++ SL+ LT + R D+ FVV   +R+++ PT +HM++VKRILRYL+G  +L + Y +     EL  F D  Y  GD++  +STSG ++ LS   + +SS  Q +++ STTEAE I  ++CA Q +++  +L+ LGW       I+C N  A+ L+       RSKH  +RF  LR+
Sbjct:   31 YKQVIGSLMYLTVT-RPDLMFVVSLVSRYMEKPTELHMQAVKRILRYLRGTTDLGVCYKKGGKAGELVAFSDNDYA-GDTDDRKSTSGYVFLLSSGAMAWSSKKQPVVSLSTTEAEFISAASCACQAVWMQRVLKSLGWIQSKSTVIYCDNCSAIKLSKNPVMHGRSKHIDVRFHFLRE 207          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.090e-29
Identity = 67/178 (37.64%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    3 YQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRD 180
            +QAI  SL+ L Q  R D+++ V Q  R   NP  +HM + K +LRYL+G P+L I Y +   F L+ F D+S+G    +  RST+G ++FL G ++ + +  Q + AQ+T EAEL  +S  A++ +Y+S  + E+G++ F  V I   + GAL +A    +  R+KH  +RF  LR+
Sbjct:  675 FQAITGSLLYLAQCTRYDMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGANP-DNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 850          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.160e-29
Identity = 67/178 (37.64%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    3 YQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRD 180
            +QAI  SL+ L Q  R D+++ V Q  R   NP  +HM + K +LRYL+G P+L I Y +   F L+ F D+S+G    +  RST+G ++FL G ++ + +  Q + AQ+T EAEL  +S  A++ +Y+S  + E+G++ F  V I   + GAL +A    +  R+KH  +RF  LR+
Sbjct: 1295 FQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGANP-DNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRN 1470          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: UPI00201B2CFE (secreted RxLR effector protein 161-like n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI00201B2CFE)

HSP 1 Score: 117 bits (293), Expect = 1.730e-29
Identity = 72/179 (40.22%), Postives = 105/179 (58.66%), Query Frame = 0
Query:    7 VRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRDWINQE 185
            V SL+ LT + R D+ +VV   ARF++ PT +H ++VKR+LRYLKG   L I Y R     L  + D+ Y  GD +  +STSG ++ LS  VV +SS  Q +++ STTEAE I  + CA Q +++  +L +LG++      IFC N   + L+       RSKH  +RF  LR+ +N E
Sbjct:    2 VGSLMYLT-ATRPDLMYVVSLIARFMEAPTVLHQQAVKRVLRYLKGTAKLGILYKRGDEESLLAYSDSDYA-GDLDGRKSTSGYVFKLSSGVVAWSSKKQPVVSLSTTEAEYITAAACAGQCIWMQRVLEKLGFKQCKCT-IFCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRELVNNE 177          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: A0A6H5JV56_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV56_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.750e-29
Identity = 59/155 (38.06%), Postives = 97/155 (62.58%), Query Frame = 0
Query:   29 ARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRDWIN 183
            AR + +P   H+ ++K I RYL+  PNL + Y +DS FEL  + DASY +  ++  +S +GSM FL+G++++FSS +Q I+AQS++E E   +++ AK G+Y S ++ ELGW      ++    + AL L    T+  RS+H  +R+  LR W++
Sbjct:  690 ARRMSSPREGHLANIKSIFRYLRKRPNLSLVYRKDSRFELPCYSDASYAS--TKDYKSVTGSMVFLAGDLIYFSSRVQRIVAQSSSEGEFFTINSTAKHGVYFSSLMGELGWSQLLKFKLLTDTRSALSLFSNGTFSNRSRHISVRYEALRGWVS 842          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: A0A822XKI1_NELNU (Uncharacterized protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822XKI1_NELNU)

HSP 1 Score: 122 bits (307), Expect = 5.350e-29
Identity = 71/178 (39.89%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    3 YQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRD 180
            Y+ +V S + +T + R D+A+VV   +RF++ PT +H ++VKR+LRYLKG   L I Y R    +L  + D+ Y  GD E  +STSG ++ LS   V +SS  Q ++  STT+AE I +++CA Q +++  IL +LG +      +FC N  A+ L+       RSKH  IRF  LRD
Sbjct: 1018 YKQMVGSFMYMT-ATRPDLAYVVSLISRFMERPTELHQQAVKRVLRYLKGTTELGIFYKRGGEEKLVAYSDSDYA-GDVEDRKSTSGYVFLLSSGAVAWSSKKQPVVTLSTTKAEFIAVASCACQSVWMRRILEKLGHKQSKCTDVFCDNSSAIKLSKNPVMHGRSKHIDIRFHFLRD 1193          
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.180e-28
Identity = 71/183 (38.80%), Postives = 115/183 (62.84%), Query Frame = 0
Query:    3 YQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYLKGAPNLKITYSRDSNFELTDFCDASY-GTGDSEKARSTSGSMYFLSGEVVHFSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFCGNKGALLLAGQDTYRIRSKHTPIRFAGLRDWINQ 184
            YQ IV SL+ LT + R +I + V+   R ++ PT+ HM   KR+LRYL+G P++ + + R   ++L  +CDAS+ G+ +  + RS++G ++ L+G VV  +S+LQ + AQS+  AE+I M+T A++ +YL G+L ELG+   +I  I   + GA+  AG   +R RSK    R+  LR  +N+
Sbjct:  485 YQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRR-GQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGNIP-IHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNK 665          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2273.6055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC04_9PHAE4.440e-3137.08Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
Q9SHR5_ARATH2.460e-3034.44F28L22.3 protein n=1 Tax=Arabidopsis thaliana TaxI... [more]
A0A6H5JF46_9PHAE7.410e-3037.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001AD9288A9.990e-3038.55secreted RxLR effector protein 161-like n=1 Tax=Ro... [more]
A0A6H5K4S9_9PHAE1.090e-2937.64CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KHG5_9PHAE1.160e-2937.64Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
UPI00201B2CFE1.730e-2940.22secreted RxLR effector protein 161-like n=1 Tax=Ri... [more]
A0A6H5JV56_9PHAE3.750e-2938.06Integrase catalytic domain-containing protein n=1 ... [more]
A0A822XKI1_NELNU5.350e-2939.89Uncharacterized protein n=1 Tax=Nelumbo nucifera T... [more]
A0A6H5J897_9PHAE1.180e-2838.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..185
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..181
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2273contigH-paniculata_contig2273:12755..13312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2273.6055.1mRNA_H-paniculata_contig2273.6055.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2273 12755..13312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2273.6055.1 ID=prot_H-paniculata_contig2273.6055.1|Name=mRNA_H-paniculata_contig2273.6055.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp
RDYQAIVRSLILLTQSARMDIAFVVLQTARFVDNPTSIHMESVKRILRYL
KGAPNLKITYSRDSNFELTDFCDASYGTGDSEKARSTSGSMYFLSGEVVH
FSSSLQNIMAQSTTEAELIVMSTCAKQGMYLSGILRELGWRNFHIVRIFC
GNKGALLLAGQDTYRIRSKHTPIRFAGLRDWINQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like