mRNA_H-paniculata_contig22705.6047.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE) HSP 1 Score: 257 bits (657), Expect = 4.580e-85 Identity = 124/143 (86.71%), Postives = 130/143 (90.91%), Query Frame = 1
Query: 1 CSVLGGNVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
CSVL G VS+QCGSPGYVAPEILR PYGT VDMWS+GVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTS AKDLIRKLLLVD +RMTA A HPWLLTTG+SLASHNLGKNL+QLRIFNATRKLRGAI+S
Sbjct: 75 CSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQS 217
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI) HSP 1 Score: 254 bits (650), Expect = 7.180e-82 Identity = 123/143 (86.01%), Postives = 128/143 (89.51%), Query Frame = 1
Query: 1 CSVLGGNVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
CSVL G VS+QCGSPGYVAPEILR PYGT VDMWS+GVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTS AKDLIRKLLLVD +RMTA A HPWLLTTG SLA HNLGKNL+QLRIFNATRKLRGAI+S
Sbjct: 232 CSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQS 374
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: D8LP07_ECTSI (Possible CDPK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP07_ECTSI) HSP 1 Score: 214 bits (544), Expect = 5.480e-69 Identity = 101/140 (72.14%), Postives = 115/140 (82.14%), Query Frame = 1
Query: 10 LGGNVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
+GG VS QCG+PGYVAPEILR YGT VDMWSIGVI+Y LLGGYPPFHDENQTRLFR+IKAG+FKFH EYW + S+ AKDLIR+LL VD ++R+TA AV HPWLL+ L HNLG NLEQLR+FNA RKLR AI+S
Sbjct: 1 MGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSISNEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDADLLKHNLGVNLEQLRLFNARRKLRAAIKS 140
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE) HSP 1 Score: 219 bits (557), Expect = 3.820e-68 Identity = 103/142 (72.54%), Postives = 117/142 (82.39%), Query Frame = 1
Query: 4 SVLGGNVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
S++GG VS QCG+PGYVAPEILR YGT VDMWSIGVI+Y LLGGYPPFHDENQTRLFR+IKAG+FKFH EYW +TS AKDLIR+LL VD ++R+TA AV HPWLL+ L HNLG NLEQLR+FNA RKLR AI+S
Sbjct: 209 SIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKS 350
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA) HSP 1 Score: 210 bits (535), Expect = 4.660e-65 Identity = 99/139 (71.22%), Postives = 115/139 (82.73%), Query Frame = 1
Query: 13 GGNVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
G V+ QCG+P YVAPEILR PYGT VDMWSIGVIIY LLGGYPPFHDENQTRLFR+I+AG F+FH+EYW + S AKDLI +LL VD+ R+TAR+AV HPWLLT+ LA+ NLGKNLEQL++FNA RKLR AI+S
Sbjct: 194 GSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKS 332
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: A0A835YRH8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH8_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.460e-63 Identity = 95/136 (69.85%), Postives = 111/136 (81.62%), Query Frame = 1
Query: 22 VSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
V+ QCG+P YVAPEILR PYGT VDMWSIGVIIY LLGGYPPFHDENQTRLFR+I+AGS+KFH EYW S+ AKDLI +LL VD +R+TA +AV HPWLL+ LA+ +L KNLEQL++FNA RKLR AI+S
Sbjct: 2 VTTQCGTPAYVAPEILRHKPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGSYKFHSEYWGGVSNEAKDLISRLLTVDVSKRLTAAEAVVHPWLLSKDIDLAARSLEKNLEQLKLFNARRKLRAAIKS 137
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI) HSP 1 Score: 204 bits (519), Expect = 1.470e-59 Identity = 97/142 (68.31%), Postives = 113/142 (79.58%), Query Frame = 1
Query: 4 SVLGGNVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
SVL G V+DQCG+PGYVAPEILR PYGT VDMWSIGVIIY +L GYPPFHDE+Q RL+R+IKAG ++F EYW++ S AKDLIRKLL VD RR+TA +A HPWL T +L H+LG LE+L+IFNATRKLR AIRS
Sbjct: 529 SVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRS 670
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.670e-58 Identity = 96/142 (67.61%), Postives = 114/142 (80.28%), Query Frame = 1
Query: 4 SVLGGNVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
SVL G V+DQCG+PGYVAPEILRG PYGT VDMWSIGVIIY +L GYPPF DE+Q RL+R+IKAG ++F EYW++ S AKDLIRKLL+VD RR+TA +A HPWL T +L H+LG LE+L+IFNATRKLR AIR+
Sbjct: 524 SVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRT 665
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.690e-53 Identity = 82/137 (59.85%), Postives = 101/137 (73.72%), Query Frame = 1
Query: 19 NVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
N++ QCG+PGYVAPEIL G PYG VDMWSIGVI Y LLGGYPPFHDE Q+ LF +I+AG F FH EYW S+ AKDLIRKLL VD +R+TA +A+ HPW+ ++LA+ NL L +LR FNA RK R +++
Sbjct: 183 NLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKA 319
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Match: A0A6H5JU42_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU42_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.620e-51 Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 1
Query: 22 VSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSDHAKDLIRKLLLVDERRRMTARDAVHHPWLLTTGQSLASHNLGKNLEQLRIFNATRKLRGAIRS 429
+S QCG+PGYVAPE+L+G YG PVD+WSIGVI Y LLGGYPPFHD+NQ +L+++IK G FH +YWS SD AKDLI+K+L +D+ +R+TA A+ HPW++ L H+LG N+ +LR+FNA RK + AI S
Sbjct: 224 LSAQCGTPGYVAPEVLKGEVYGKPVDIWSIGVITYILLGGYPPFHDDNQAKLYQKIKKGKVLFHPQYWSTVSDEAKDLIKKMLTLDKDKRITAEQALEHPWVVGDAAELEKHDLGANMGKLRLFNARRKFKSAISS 359 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22705.6047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22705.6047.1 >prot_H-paniculata_contig22705.6047.1 ID=prot_H-paniculata_contig22705.6047.1|Name=mRNA_H-paniculata_contig22705.6047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp CSVLGGNVSDQCGSPGYVAPEILRGAPYGTPVDMWSIGVIIYTLLGGYPPback to top mRNA from alignment at H-paniculata_contig22705:947..3220+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22705.6047.1 ID=mRNA_H-paniculata_contig22705.6047.1|Name=mRNA_H-paniculata_contig22705.6047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2274bp|location=Sequence derived from alignment at H-paniculata_contig22705:947..3220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22705:947..3220+ >mRNA_H-paniculata_contig22705.6047.1 ID=mRNA_H-paniculata_contig22705.6047.1|Name=mRNA_H-paniculata_contig22705.6047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig22705:947..3220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |