mRNA_H-paniculata_contig2268.6035.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A6H5KVP7_9PHAE (Dynamin_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVP7_9PHAE) HSP 1 Score: 725 bits (1872), Expect = 8.300e-255 Identity = 369/514 (71.79%), Postives = 424/514 (82.49%), Query Frame = 2
Query: 185 SWRLTAAKPCCRGLSSLDGKVQAEIMDRCNELHASFIQPLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGS--DSTRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRGQGVDLTGDGNNTSPALSSGLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWRYGTTLASLSAGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAPVQFSFFGTSSK 1720
SW ++ R S++D KVQAEI+++C++LHASFIQPLND GPLEKL TGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPG +D+DQDGPA+VGDPDMGF GLRQFGPTL HHTELK+RSG STNSFMMVDSPGMIDSP+SR+ + D P+ RG D++RGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSL G DHKLY+VLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVK R G G+G +LSSGL DL+ TRDDV AEVMKAPKRRIDN+ITRLTDSVHLLQVHT VLD +Q D R A++ R+GTT A L+AG GL G SVFL AP E+ G GL++ AGG+QF N KALKA E M S+EGLN +F + Y RE++EGDESIT++W R+R GLH TL+SLG+DGV +VK+ E++EL++ILD +IP+LRR+AAPV+FSFFGT S+
Sbjct: 31 SWETDGSRHQRRRQSTVDSKVQAEILEKCDDLHASFIQPLNDKTAGPLEKLQTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGPSDLDQDGPALVGDPDMGFSGLRQFGPTLTHHTELKVRSGISTNSFMMVDSPGMIDSPMSRSIYERSD--------PDSPAGRGKGVDTSRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLAGKDHKLYVVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKSRDGGA---GEGE-VELSLSSGLHDLEATRDDVAAEVMKAPKRRIDNIITRLTDSVHLLQVHTTVLDALQKDFRNAKLVRHGTTFAVLAAGGGLFGGSVFLGAPIEMAVGAAGLALASAGGLQFHNSKALKATHEEMISVEGLNHYFGKIYTREVSEGDESITASWRRIRHGLHLTLASLGIDGVSRVKASEQRELQKILDTDIPSLRRQAAPVRFSFFGTKSR 532
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A836CHQ6_9STRA (Dynamin_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ6_9STRA) HSP 1 Score: 626 bits (1614), Expect = 1.240e-215 Identity = 327/527 (62.05%), Postives = 395/527 (74.95%), Query Frame = 2
Query: 167 ITNGTPSWRLTAAKPCCR-GLSSLDGKVQAEIMDRCNELHASFIQPLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGSDSTRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRGQ---------GVDLTGDGNNTSPALSSGLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWRYGTTLASLSAGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAPVQFSFFGTSS 1717
I G PS R+ R ++LD +QAEIM +C +L + FIQPLND + GPL+K ++GGY++TK+PFVFVLGNHSSGKSSFIN+ +GR IQT GVAPTDDSFTIIAPG DIDQDGPA++GDPDMGF GLRQFGP L+HHT LK+R +T++FMMVDSPGMIDSPV+R SA+D+G + R S S RGYDFE VV+WFA+RADVILLFFDPDKPGTTGETLSILTNSLPG+DHKLYIVLNKAD+FE+IHDFARA+GSLCWNLSKVI RKDLPRIYTMCLP DR Q G S L SGLQDL+ TR V +EV KAPKRRIDN+ITRLTDSVHLLQVH +++++Q D RRA+ + GTTLA + AG G +G S++LSAP EL A V L+V+ AGG+ F + L+ KEE+M S+EGLN F + YA ELAEGDE I S W R+RE L TL + GL+ + VK+ + K+L+RILD +IP+LRR AAPVQF++ G +
Sbjct: 2 IAQGVPSLRINPRVLSTRDSAATLDTSLQAEIMSKCEDLSSKFIQPLNDRLRGPLDKSSSGGYRTTKLPFVFVLGNHSSGKSSFINHCIGRTIQTTGVAPTDDSFTIIAPGPKDIDQDGPALIGDPDMGFSGLRQFGPALIHHTCLKVRRDIATSTFMMVDSPGMIDSPVTRA--SAFDSGGGAHNR--------SLSDRGYDFEAVVKWFADRADVILLFFDPDKPGTTGETLSILTNSLPGLDHKLYIVLNKADKFERIHDFARAFGSLCWNLSKVIQRKDLPRIYTMCLPEADRQQQXXXXXXXXXXXXXGGDAGESSRLGSGLQDLESTRVTVLSEVFKAPKRRIDNIITRLTDSVHLLQVHATIVEDLQRDYRRAKWGQRGTTLAVVGAGAGAAGASMYLSAPLELPAAVGVLTVLLAGGVHFMTSRTLRQKEEHMLSVEGLNMRFSKCYATELAEGDEMINSVWKRIRESLKLTLGTSGLNAIPSVKANDLKQLQRILDQDIPSLRRSAAPVQFTYEGAKA 518
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A7S2EBB6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EBB6_9STRA) HSP 1 Score: 541 bits (1394), Expect = 7.750e-182 Identity = 286/493 (58.01%), Postives = 354/493 (71.81%), Query Frame = 2
Query: 236 DGKVQAEIMDRCNELHASFIQPLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGSDSTRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRG-QGVDLTGDGNNTSPALSSGLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARM-W----RYGTTLASLSAGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAPVQF 1696
+GK+Q EI+D+C+ELH+S + P+N+ + GPL K + G T +PFV ++GNHSSGKSSF+NYVLGR +QTAGVAPTDD FT+IAPG +D+DQDGPA+VGDPDMGF LRQFGPTL+HHT+LK+RS N+FM+VDSPGMIDSPVS G S Y G + RGYDF+GVV+WFAERADV+LLFFDPDKPGTTGETLSIL +SL GMDHKL IVLNKADQF KIHDFARAYGSLCWNLSKVIPRKDLPRI+TMCLP D TG P + SGL DL +TRDDV AEVMKAPKRRIDNVIT L DSVHLL +H R++++ + R +RM W + G TLA+ G L+ ++ S P E T GVV +V+G GG+ ++N LKA E+N+ + E L F+R ++RE++E DE +S W R+R+ L +L ++GLD V S + L +ILD +IP LRR A+P F
Sbjct: 106 EGKIQREILDKCSELHSSLM-PMNEKLRGPLAKHSDRG---TSLPFVLLVGNHSSGKSSFVNYVLGRKVQTAGVAPTDDCFTVIAPGPSDVDQDGPALVGDPDMGFANLRQFGPTLIHHTQLKVRSDIQNNNFMLVDSPGMIDSPVSAGGMSQYGGG--------------AIMDRGYDFQGVVKWFAERADVVLLFFDPDKPGTTGETLSILLHSLGGMDHKLMIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIFTMCLPASSTTTSSTDETGA--TVPPPIGSGLADLHQTRDDVVAEVMKAPKRRIDNVITHLNDSVHLLLMHARIVEDTRS--RYSRMVWENRVQEGGTLAT---GASLTALGMYFSLPVEFTGGVVAATVLGVGGMHWYNSSKLKAHEDNLLTPEELGASFQRTHSREVSEADEFTSSVWQRIRDPLMVSLRTVGLDNTPTVGSKDIYALNQILDEDIPRLRRLASPTHF 573
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A7S3V588_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V588_9STRA) HSP 1 Score: 538 bits (1387), Expect = 2.260e-181 Identity = 279/489 (57.06%), Postives = 346/489 (70.76%), Query Frame = 2
Query: 230 SLDGKVQAEIMDRCNELHASFIQPLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGSDSTRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRGQGVDLTGDGNNTSPALSSGLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWRYGTTLASLSAGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAPVQF 1696
++ VQ++I+D C+ LH S I PLN+ + GPL K + ++T +PFVF++GNHSSGKSSFINYVLGR+IQTAGVAPTDD FT++APG D DQDGPA++GDPDMGF GLRQFGPTL+HHT+LK+R+ T+T SFMMVDSPGMIDSPVS+ G P+ G G RGYDF+GVVRWF+ERADV+LLFFDPDKPGTTGETL++L +SL GMDHKL IVLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRI+TMCLP K G T ++ GL+DL +TRDDV EVMKAPKRR+DN++T L DSVHLL +H +V +++Q + L S++AGIGLS + P E T L+VVG GG+++FN L E + SME L+ F+R ++RE+++ DE S W R+R+ L +L S GL S E +LRRILD EIP LRR A+P F
Sbjct: 77 NISPSVQSQILDECSSLHRS-IMPLNEKIRGPLAKNSD---KNTALPFVFLVGNHSSGKSSFINYVLGRSIQTAGVAPTDDCFTVVAPGPDDTDQDGPALIGDPDMGFSGLRQFGPTLIHHTQLKVRADTNTPSFMMVDSPGMIDSPVSQAGI------------PQGYGS-GQSMDRGYDFQGVVRWFSERADVVLLFFDPDKPGTTGETLNVLLHSLSGMDHKLLIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIFTMCLPNKTDG-----------TDGSIGDGLKDLHQTRDDVLLEVMKAPKRRVDNIVTHLNDSVHLLLMHAQVAEDVQKKYSKIVWNNRVQELGSMTAGIGLSVLGFYAQLPMEFTGSAAALTVVGVGGMKWFNDTKLDEAESQLVSMEELSASFQRTHSREISDADEYTASIWQRIRDNLQLSLKSEGLSSYPSASSSEMDDLRRILDEEIPRLRRLASPNHF 537
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A7S2UYE7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYE7_9STRA) HSP 1 Score: 536 bits (1380), Expect = 2.930e-180 Identity = 308/544 (56.62%), Postives = 372/544 (68.38%), Query Frame = 2
Query: 167 ITNGTPSWRLT--AAKPCCRG----LSSLDGK-------------VQAEIMDRCNELHASFIQPLNDNVNGPLEKLNTGGY------QSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGSDSTRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDR-GQG-----VDLTGDGNNTSPALSSGLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWR--YGTTLASLSAGIGLSGCSVFLSAPQELTA--GVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAPVQ 1693
+T P W L AA CRG S++ K Q I+ RC ELHA+ +QPLN+ GPL TGG ++TK+PFVF+LGNHSSGKSSFINYVL R IQTAGVAPTDDSFTII+PG DIDQDGPA+VGDPDMGF GLR FGP L+HH +LK+RSG +TNSFMMVDSPGMIDSPVSR SA+++ +S + R+ RGYDFE VRWFA+RADV+LLFFDPDKPGTTGETLSILTNSL G+DHKLYI+LNKADQF +IHDFARAYGSLCWNLSKVI RKDLPRI+TMCLP +DR G +DL N S GLQDL +TR+DV AEV KAPKRRIDNVITRLTDS HLL+VH VL ++Q R +WR T A+L A G + + L+ P E+ A G GL VVG G +N + L + + + EGLNT F YA LAEGDE + + W R+R+ L +L++ G +GV KV++G+ +EL R+L+ E+P+LRR A+P Q
Sbjct: 5 LTGLVPRWHLLRGAASRICRGNLAGFSTMSDKGSAPKFTIDLSEETQKTILKRCGELHAT-LQPLNEGTRGPL----TGGGGMGLDGRTTKLPFVFLLGNHSSGKSSFINYVLQRKIQTAGVAPTDDSFTIISPGPQDIDQDGPALVGDPDMGFSGLRHFGPALIHHIQLKVRSGVATNSFMMVDSPGMIDSPVSRV--SAFESATASYEGGYDTDRQ-RQFDRGYDFEAAVRWFADRADVVLLFFDPDKPGTTGETLSILTNSLAGLDHKLYIILNKADQFRRIHDFARAYGSLCWNLSKVITRKDLPRIFTMCLPEQDRLADGGPTARLDLDAGANGES----GGLQDLHETRNDVVAEVFKAPKRRIDNVITRLTDSAHLLEVHCTVLQQLQKSRNR-HVWRGRLALTGATLVAA-GAAAAAATLTMPTEVLAATGAAGLMVVG--GTHLYNRRVLADETAQLLTSEGLNTAFEACYAPRLAEGDEFVLAVWKRIRDNLKVSLTTAGFEGVDKVRAGQLQELARVLEEEVPSLRRLASPHQ 532
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A7S2UGL1_9STRA (Hypothetical protein n=3 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGL1_9STRA) HSP 1 Score: 516 bits (1330), Expect = 3.370e-174 Identity = 273/467 (58.46%), Postives = 329/467 (70.45%), Query Frame = 2
Query: 299 PLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGSDSTRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRGQGVDLTGDGNNTSPALSSGLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWRYGTT-LASLSAGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAPVQF 1696
PLND GPL K + G T +PFVF++GNHSSGKSSF+NYVLGR +QTAGVAPTDDSFT+IAPG D DQDGPA++GDPDMGF LRQFGPTL+HHT+LK+RSG + +FMMVDSPGMIDSPVS GFS N + RGYDF+GVVRWFAERADV+LLFFDPDKPGTTGETLSIL +SL GMDHKL IVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVK G+ + GL DL +TRDDV AEVMKAPKRRIDNVIT L DSVHLL +H + ++++ + +W + T + + AG GL+ S++ P E + GV ++V+GAGG+++ N L E + + E L+ F+R +ARE++E DE S W R+R L +L S+GL + V S E +L ILD +IP LRR A+P F
Sbjct: 2 PLNDQWRGPLAKHSDRG---TSLPFVFLVGNHSSGKSSFVNYVLGRKVQTAGVAPTDDSFTVIAPGPEDTDQDGPALIGDPDMGFSNLRQFGPTLIHHTQLKVRSGINNGNFMMVDSPGMIDSPVSSGGFSGQTN----------------TTDRGYDFQGVVRWFAERADVVLLFFDPDKPGTTGETLSILLHSLGGMDHKLLIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKG----------GDTAQKEIMQGLADLHQTRDDVVAEVMKAPKRRIDNVITHLNDSVHLLMMHALISEDVRKRYSKV-VWDHRTQEVGTAVAGGGLAALSLYAGIPTEFSFGVFCVTVLGAGGLRWHNSIQLTEAEAQLLTTEELSASFQRTHAREISEADEFTASVWQRIRGPLQMSLQSIGLANIPSVSSSEWAQLNNILDQDIPKLRRLASPTHF 438
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: B8BQ51_THAPS (Dynamin_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ51_THAPS) HSP 1 Score: 519 bits (1336), Expect = 1.040e-172 Identity = 284/487 (58.32%), Postives = 337/487 (69.20%), Query Frame = 2
Query: 257 IMDRCNELHASFIQPLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFS-AYDNGPSSSGRPEEMGRRGSDST--------RGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRGQGVDLTGDGNNTSPALSS-GLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWRYGTTLASLSAGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAP 1687
I+ + LH+S I PLN + GPL K + G T +PFVF++GNHSSGKSSFINYVLGR++QTAGVAPTDD FT+IAPG D+DQDGPA+VGDPD+GF GLRQFGPTL+HH +LK+R G +FMMVDSPGMIDSPVS G S Y MG G S+ RGYDF+GVVRWFAERADV+LLFFDPDKPGTTGETLSIL +SL GMDHKL IVLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRI+TMCLPVK T N AL L DL +TRDDV AEVMKAPKRRIDNVIT L DSVHLL +H V ++++ + + +SL AG+GL+ + S P + T GVV +VVG GG+++FN LK EE + S+E L+ F+R + RE+ E DE S W RVR+ L +L GL VK G+ + L+ ILD EIP LRR A+P
Sbjct: 131 IISQVTNLHSS-IMPLNTTLRGPLAKNSDRG---TSLPFVFLVGNHSSGKSSFINYVLGRSVQTAGVAPTDDCFTVIAPGPKDVDQDGPALVGDPDIGFEGLRQFGPTLIHHAQLKVREGIQNQNFMMVDSPGMIDSPVSSGGMSMGY-----------SMGNSGMHSSSTSSAVMDRGYDFQGVVRWFAERADVVLLFFDPDKPGTTGETLSILLHSLGGMDHKLLIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIFTMCLPVKRDDNDASST---NIAQEALDQRALADLHQTRDDVVAEVMKAPKRRIDNVITNLHDSVHLLLMHAVVAEDVRSRYSKRQWENRIQEFSSLVAGVGLAALGLHFSVPPQFTGGVVAATVVGVGGLRWFNSSKLKDAEEQLLSVEELSASFQRTHPREVNEADEFYASVWQRVRDPLKLSLWRTGLSDFPAVKKGDLQHLQMILDEEIPRLRRLASP 599
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A7S2VHD5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHD5_9STRA) HSP 1 Score: 513 bits (1322), Expect = 2.280e-171 Identity = 272/482 (56.43%), Postives = 341/482 (70.75%), Query Frame = 2
Query: 245 VQAEIMDRCNELHASFIQPLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGSDSTRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRGQGVDLTGDGNNTSPALSS-GLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWRYGTTLASLSAGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAP 1687
VQ I+++C+ELH+S I P N ++ GPL K + G T +PFVF++GNHSSGKSSFINYVLGR++QTAGVAPTDD FT+IAPG D+DQDGPA+VGDPD+GF GLRQFGPTL+HHT+LK+R G FM++DSPGMIDSPV+ G + ++ SS M RGYDF+GVVRW AERADV+LLFFDPDKPGTTGETL+IL +SL GMDHKL IVLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRI+TMCLPV G + T+ AL L DL ++RDDV AEVMKAPKRRIDNVIT L DSVHLL +H V ++++ + + ++SL G+GLS + P + T GVV +V+G GG+ +FN LK EE +TS+E L+ F+R + +E++E DE ++ W R+R+ L +L GL V + +L+ ILD EIP LRR A+P
Sbjct: 80 VQQSILNQCSELHSS-IMPFNTSLQGPLAKNSDKG---TSLPFVFLVGNHSSGKSSFINYVLGRSVQTAGVAPTDDCFTVIAPGPKDVDQDGPALVGDPDIGFEGLRQFGPTLIHHTQLKVRDGIRNQDFMIIDSPGMIDSPVNYGGMVSNNSKDRSSTSSAIM-------DRGYDFQGVVRWMAERADVVLLFFDPDKPGTTGETLNILLHSLGGMDHKLLIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIFTMCLPVASTTDGEAKSA---TTTEALDRHALADLHQSRDDVLAEVMKAPKRRIDNVITNLHDSVHLLLMHAVVAEDVRARYSKRQWENRMQEVSSLVLGVGLSALGIHFDVPLQFTGGVVAATVIGVGGMHWFNSSKLKDAEEQLTSIEELSASFQRTHPQEVSEADEFYSAIWARIRDPLRLSLWRTGLSDFPAVSKSDVAKLQNILDQEIPRLRRLASP 547
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A4D9CUF5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUF5_9STRA) HSP 1 Score: 513 bits (1320), Expect = 3.900e-170 Identity = 283/519 (54.53%), Postives = 350/519 (67.44%), Query Frame = 2
Query: 209 PCCRGLSSLDGKV----------QAEIMDRCNELHASFIQPLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGSDSTRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRGQGVD-------LTGDGNNTSPALSSGLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWRYGTTLASLS-AGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGK---VKSGERKELRRILDVEIPALRRRAAPVQFSF 1702
P R LS+ DG Q ++ RC+EL S++QP+ND + GPLEK + ++ +PFVF+LGNHSSGKSSF+NYV R IQTAGVAPTDDSFTIIAPG ADIDQDGP+ +GDPDMGF GLR FGP L+HHT+LKIR+G +T FM+VDSPGMIDSP + + + S+S + + + RGYDF+GV +WFA+RADVILLFFDPDKPGTTGETLSILT SL GMDHKLYIVLNKADQF KIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLP + Q L G+ P+L GL DL+++R++V EV+KAPKRRIDNVITRL DSVHL+Q+H VL+ ++ D R +WR+ ASL AG+G G ++L + L +GAGG + N K LK + S EGL F R YAR + EGDE + S W R L L++ +GK V E +E++ IL+ ++PALRR AAPV ++F
Sbjct: 35 PLERSLSTDDGNTTHSGTIKLDSQRRVLQRCDELQ-SYLQPINDRLRGPLEKCSD---KAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPADIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPSPSSLISASYKEDNTRSARNHLDRGYDFQGVCKWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSHSSRPAALGGELEIEGPSLGLGLADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFAR-ELWRFRAGAASLCLAGVGAVGGGMYLGVALQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGQDLGKLPKVSKAELQEIQCILEEDVPALRRLAAPVSWTF 548
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Match: A0A7S1BVP1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVP1_9STRA) HSP 1 Score: 506 bits (1302), Expect = 1.550e-168 Identity = 285/502 (56.77%), Postives = 343/502 (68.33%), Query Frame = 2
Query: 233 LDGKVQAEIMDRCNELHASFIQPLNDNVNGPLEKLNTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGSADIDQDGPAIVGDPDMGFLGLRQFGPTLVHHTELKIRSGTSTNSFMMVDSPGMIDSPVSRTGFSAYDNGPSSSGRPEEMGRRGSDST----RGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKDRGQGVDLTGDGNNTSPA------LSSGLQDLQKTRDDVKAEVMKAPKRRIDNVITRLTDSVHLLQVHTRVLDEMQGDMRRARMWR----YGTTLASLSAGIGLSGCSVFLSAPQELTAGVVGLSVVGAGGIQFFNMKALKAKEENMTSMEGLNTHFRRGYARELAEGDESITSAWIRVREGLHATLSSLGLDGVGKVKSGERKELRRILDVEIPALRRRAAPVQF 1696
+D VQ E++ C++LHA + PLN+ + GPLEK QST +PFV ++GNHSSGKS+FIN+VLGR +QT+GVAPTDD FTIIAPG DIDQDG A +GDPDMGF LRQFGP L+HHT+LKIRS T SFMMVDSPGMIDSP S G M RR D RGYDFEGVVRW++ERADVILLFFDPDKPGTTGETLSIL ++L GMDHKL IVLNKADQF +IHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPV D G D T ++ SP L GL DL+ R +V AEVMKAPKRRIDN ITRL DSV+LL++H + ++++ R +W + T L S SA S S +L ++TA V S+ A ++N + L+ E ++ S +GL+ FRR YAR++AEGDE S W RVR L LS++GL V VK+GE ++L RIL+ EIP LRR A+P F
Sbjct: 62 VDPAVQTEVLRACSDLHAGVL-PLNEKIRGPLEK---SASQSTALPFVLLVGNHSSGKSTFINHVLGRTVQTSGVAPTDDCFTIIAPGPQDIDQDGHAALGDPDMGFGSLRQFGPALIHHTQLKIRSDVKTRSFMMVDSPGMIDSPASHEGM---------------MLRRSKDDRALMDRGYDFEGVVRWYSERADVILLFFDPDKPGTTGETLSILVHALGGMDHKLLIVLNKADQFRRIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVSD---GPDET-PSDDPSPEEDGDLPLGQGLADLRMARREVVAEVMKAPKRRIDNAITRLGDSVNLLRMHAVLTEDLRSRYVR-EVWSSRLYFSTVLVSGSAA---SAGSFYLGQDLKVTAAVASASLAVAALTGWYNSQLLRRAEADLASPDGLSASFRRSYARQIAEGDEFTASLWERVRGSLELNLSAVGLANVPAVKAGEVEDLDRILEEEIPRLRRLASPSHF 536 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2268.6035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2268.6035.1 >prot_H-paniculata_contig2268.6035.1 ID=prot_H-paniculata_contig2268.6035.1|Name=mRNA_H-paniculata_contig2268.6035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=543bp MSSALHLCARRVTTSSSPIARWTITNGTPSWRLTAAKPCCRGLSSLDGKVback to top mRNA from alignment at H-paniculata_contig2268:9430..14250- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2268.6035.1 ID=mRNA_H-paniculata_contig2268.6035.1|Name=mRNA_H-paniculata_contig2268.6035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4821bp|location=Sequence derived from alignment at H-paniculata_contig2268:9430..14250- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2268:9430..14250- >mRNA_H-paniculata_contig2268.6035.1 ID=mRNA_H-paniculata_contig2268.6035.1|Name=mRNA_H-paniculata_contig2268.6035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3258bp|location=Sequence derived from alignment at H-paniculata_contig2268:9430..14250- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |