mRNA_H-paniculata_contig2247.5979.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 114 bits (285), Expect = 1.630e-24 Identity = 96/326 (29.45%), Postives = 130/326 (39.88%), Query Frame = 2
Query: 152 LPSSDDAAKMDPFNSKLDK*YARFRKTNRFLIQRRTSVGQKLLQGHEGSHERGC*KFAPPSVQQPRRAHRIGAR-----------------------VYRRCSAS*GTWIKSQSSTR*RWTPCWRRLG*RTRVFLPEATIRSALHLARRYGQWAKGDSVHH---FQRHVVQPLPRRHYGEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECK-----------------------------------------LWLRENWKGRLGT------SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGL 910
+P++ + F K + Y RFRK N F I+RRTSVGQKL +G+EG K V+ RA I AR V S + TWI+ QSSTR RW P WRR P + ++ R A G V F+ P GE+ +S+ EI ANR++ GH NG S+GV E SW D REC W +E W+ T S+ Q+P +LVLDD++CH++ +LN++ NT + P GL
Sbjct: 150 MPANTKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWTTVMKLRETLVK---RAGEIYARRQPPAPDESPIKGEDLTSEQLVSVEAEDSRNSATWIRRQSSTRCRWRPLWRR---------PVRRMLASAQEERVLAVMADGKKVSPRIIFKGMPFIPPTVSGKGESILPRTNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGARASWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVVSTWCKEAWESTPETXRPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGL 463
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 105 bits (261), Expect = 2.130e-21 Identity = 88/263 (33.46%), Postives = 125/263 (47.53%), Query Frame = 2
Query: 188 FNSKLDK*YARFRKTNRFLIQRRTSVGQKLLQGHEGSHERGC*KFAPPSVQQPRRAHRIGARVYRRCSAS*GTWIKSQSSTR*RWTP--CWRRLG*RTRVFLP---EATIRSALHLARRYGQWAKGDSVHH---FQRHVVQPLPRRHYGEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWKGRLGT-SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGLRLIDMGLELSNRI 949
F SK Y RFRK N+F I+RRTSVGQKL +GHEG K ++ RA I A+ Y + SS++ + LG + + +A + A G V F+ P G+A ++SI E+ ANRS+ G G S+GV E SW D RECKLW++ +WK R S+ Q+ +LVLDD+KCH++ +L +EANT + P GL + L+L +R+
Sbjct: 168 FKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLE---RAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERDAGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPL---LQLLDRM 424
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 102 bits (255), Expect = 5.640e-21 Identity = 88/268 (32.84%), Postives = 123/268 (45.90%), Query Frame = 2
Query: 188 FNSKLDK*YARFRKTNRFLIQRRTSVGQKLLQGHEGSHERGC*KFAPPSVQQPRRAHRIGARVYRRCSAS*GTWIKSQSSTR*RW----------------TPCWRRLG*RT---RVFLPEATIRSALHLARRY----GQWAKGDSVHH---FQRHVVQPLPRRHYGEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWKGRLGT-SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGL 910
F K++ Y RFRK N F I+RRTSVGQKL +G+EG K V RRA I AR R A + IK + T + TP + T + +A I + R+ A G V F+ P G++ ++S+ EI ANR++ H NG S+GV E SW D REC W+ +WK R S+ Q+P +LVLDD+KCH++ +L ++ANT ++ P GL
Sbjct: 27 FKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALV---RRAGEIYAR--RHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGL 289
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.820e-20 Identity = 87/277 (31.41%), Postives = 124/277 (44.77%), Query Frame = 2
Query: 152 LPSSDDAAKMDPFNSKLDK*YARFRKTNRFLIQRRTSVGQKLLQGHEGSHERGC*KFAPPSVQQPRRAHRIGARVYRRCSAS*GTWIKSQSSTR*RW----------------TPCWRRLG*RT---RVFLPEATIRSALHLARRY----GQWAKGDSVHH---FQRHVVQPLPRRHYGEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWKGRLGT-SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSP 901
+P++ + F K + Y RFRK N F I+RRTSVGQKL +G EG K V+ RA I AR R A + IK + T + TP + T + +A I + R+ A G V F+ P G++ ++S+ EI ANR++ GH NG S+GV E SW D REC W+ +WK R S+ Q+P +LVLDD+KCH++ +L ++ANT + P
Sbjct: 15 MPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVK---RAGEIYAR--RHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIP 286
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 100 bits (250), Expect = 8.210e-20 Identity = 83/267 (31.09%), Postives = 120/267 (44.94%), Query Frame = 2
Query: 191 NSKLDK*YARFRKTNRFLIQRRTSVGQKLLQGHEG----------------SHERGC*KFAPPSVQQPRRAHRIGARVYRRCSAS*GTWIKSQSSTR*RWTPCWRRLG*RTRVF---LPEATIRSALHLARRY----GQWAKGDSVHH---FQRHVVQPLPRRHYGEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWKGRLGT-SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGL 910
NSK Y RF K N+F I+RRTSVGQKL +GHEG + E ++ P + P R + + + + + T P + T + +A I + R+ A G V F+ P G+A ++SI E+ ANRS+ G G S+GV E SW D RECKLW++++WK R S+ Q+ +LVLDD+KCH++ +L +EANT + P GL
Sbjct: 182 NSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQT-----PVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGL 443
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.300e-18 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 2
Query: 608 GEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWKGRLGT-SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGLRLIDMGLELSNRI 949
G++ ++S+ EI ANR++ GH NG S+GV E SW D REC W +WK R S+ Q+P +LVLDD+KCH++ +L ++ANT + P GL + L+L+ ++
Sbjct: 33 GKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDLNKQM 147
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 3.310e-18 Identity = 95/302 (31.46%), Postives = 130/302 (43.05%), Query Frame = 2
Query: 131 REVLNRRLPSSDDAAKMDPFNSK----------LDK*YARFRKTNRFLIQRRTSVGQKLLQGHEGSHERGC*KFAPPSVQQPRRAHRIGARVYRRCSAS*GTWIKSQSSTR*RWT----------------PCWRRLG*RT---RVFLPEATI---------RSALHLARRYGQWAKGDSVHH---FQRHVVQPLPRRHYGEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWKGRLGT-SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGL 910
REV+N+ L DA P N+K + Y RFRK N F I+RRTSVGQKL +G+EG K V+ RA I AR R A + IK + + P + T + +A I R L LA A G V F+ P G++ ++ + E+ ANR++ GH NG S+GV E SW D REC W+ +WK R S+ Q+P +LVLDD+KCH + +L ++ANT + P GL
Sbjct: 192 REVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVK---RAGEIYAR--RHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVT----ADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGL 484
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 5.630e-18 Identity = 93/305 (30.49%), Postives = 133/305 (43.61%), Query Frame = 2
Query: 131 REVLNRRLPSSDDAAKMDPFNSK----------LDK*YARFRKTNRFLIQRRTSVGQKLLQGHEGSHERGC*KFAPPSVQQPRRAHRIGARVYRRCSAS*GTWIKSQSSTR*R----------------WTPCWRRLG*RTRVFLP---EATIRSALHLARRY----GQWAKGDSVHH---FQRHVVQPLPRRHYGEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWK-----GRLGT----SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGL 910
REV+N+ L DA P N+K + Y RFRK N F I+RR SVGQKL +G+EG K V+ RA I AR R A + IK + T + TP + T + +A I + R+ A G V F+ P G++ ++S+ E+ ANR++ GH NG S+GV E SW +EC W+ +WK G + S+ Q+P +LVLDD+KCH++ +LN++ANT + P GL
Sbjct: 152 REVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVK---RAGEIYAR--RHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGL 451
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5KKC9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC9_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 8.390e-18 Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 2
Query: 608 GEAACTAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWKGRLGT-SMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGL 910
G++ ++S+ EI ANR++ GH NG S+GV E SW D REC W+ +WK R S+ Q+P +LVLDD+KCH++ +L ++ANT + +P GL
Sbjct: 253 GKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFTPGGL 354
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Match: A0A6H5KQD4_9PHAE (Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD4_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.090e-17 Identity = 84/274 (30.66%), Postives = 112/274 (40.88%), Query Frame = 2
Query: 182 DPFNSKLDK*YARFRKTNRFLIQRRTSVGQKLLQGHEGSHERGC*KFAPPSVQQPRRAHRIGARVYRRCSAS*GTWIKSQSSTR*RWTPCWRRLG*RTRVFLPEATIRSALHLARRYGQWAKGDSVHHFQRHVVQ--------PLPRRHYGEAAC-------------TAESSIK*EISLANRSRCGHLPNGTSYGVDENSWYDHRECKLWLRENWKGRLGTSMFSQQPSVLVLDDYKCHRNHKVQGSLNKEANTDTVLSPVGL----RLIDMG 928
D FNS Y RFR + +RRTSVGQKL GHEG K+ ++Q+ R A R A G ++ PC A H G+ + + V Q P+ R EA AE +I E++ NR++ GH G S+GV ENSW D E LW+ E+W+ Q+PS+LVLDD+KCHR+ L K NT +L P GL +L+D G
Sbjct: 1086 DKFNSW----YKRFRARRGYSTRRRTSVGQKLPNGHEGM------KWG--TLQKLRTALRGRA----------GQIFAERN-------PC-------------------ASHELPLDGEELSSEQLESVMEEVFQELGNMDQTPVQREMPVEATLEIRGAKDARISTGAAEGAISAEVAPGNRTKFGHPVGGMSFGVQENSWCDAPEGSLWISESWRLCPNHESIKQRPSILVLDDFKCHRDKAFIDDLGKRCNTSVILIPGGLTPVLQLLDRG 1311 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2247.5979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2247.5979.1 >prot_H-paniculata_contig2247.5979.1 ID=prot_H-paniculata_contig2247.5979.1|Name=mRNA_H-paniculata_contig2247.5979.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp MLPRWTRSTASSTNDTLGFARRTGFLSNAAPASAKSSCRAMRVVMSVGAEback to top mRNA from alignment at H-paniculata_contig2247:4832..6169- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2247.5979.1 ID=mRNA_H-paniculata_contig2247.5979.1|Name=mRNA_H-paniculata_contig2247.5979.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1338bp|location=Sequence derived from alignment at H-paniculata_contig2247:4832..6169- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2247:4832..6169- >mRNA_H-paniculata_contig2247.5979.1 ID=mRNA_H-paniculata_contig2247.5979.1|Name=mRNA_H-paniculata_contig2247.5979.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig2247:4832..6169- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |