prot_H-paniculata_contig22469.5978.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A2H9ZYF2_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZYF2_9ASPA) HSP 1 Score: 96.3 bits (238), Expect = 1.550e-20 Identity = 56/142 (39.44%), Postives = 86/142 (60.56%), Query Frame = 0
Query: 3 VFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEE---DFETSHRGQPEH--DGTRHMEGLFSAPAEEVI--------GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDF 131
+F+GY +++ YR+YNP K + +SR+V FDE D++ + + H + + ME SA + G+AAI +KW+ + K DGSV +YKARLV +G++Q D+FET +PVARM T+RT+ SLAA ++
Sbjct: 505 IFIGYSQETKGYRVYNPITKQLYVSRDVIFDENACWDWKPTCFEEAIHREEWKQSMEEEISAINKNKTWALTDLPEGKAAIGLKWVFRVKYNVDGSVHKYKARLVVKGYAQQAGIDYFETFSPVARMETIRTVLSLAAHYNW 646
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A6L2NKU3_TANCI (Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NKU3_TANCI) HSP 1 Score: 89.7 bits (221), Expect = 2.770e-18 Identity = 56/134 (41.79%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 3 VFLGYDEDSPSYRIYNPENKSVQL------SRNVGFDEEDFETSHRGQPEHDGTRHMEGLFSAPAEEVIGRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELD 130
+F+GY E S YR Y E L SR+ FDEE F + R + G+ + ++ KWILKRK+K DGS+ +YKARLV QGF Q DFF+T APVAR+ST+R + +LAA D
Sbjct: 219 IFIGYAEHSKCYRFYVIEPNDYVLVNSIIESRDAIFDEERFTSIPRPR----------GMIQPSSSKITEDEVEGCKWILKRKMKVDGSIDKYKARLVIQGFRQKNGIDFFDTYAPVARISTIRLLLALAAIHD 342
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A5A7SLT1_CUCME (Putative copia-type polyprotein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7SLT1_CUCME) HSP 1 Score: 85.1 bits (209), Expect = 1.250e-16 Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = 0
Query: 3 VFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEE-------DFETSHRGQPEHDGTRHMEGLFSAPAEEVI----------------GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE 132
VF+GYD S Y++YNP K +SR+V FDEE E +P + + +E I G+ A+ +KW+ K K E G V RYKARLVA+G+SQ + D+ E APVAR+ T+R + +LAA+ +++
Sbjct: 599 VFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWNDKLEDYKFFEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWK 751
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: UPI000E1C253E (uncharacterized protein LOC112939069 n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=UPI000E1C253E) HSP 1 Score: 84.0 bits (206), Expect = 3.160e-16 Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = 0
Query: 3 VFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEEDFETSH-RGQPEHDGTRHM-------------EGLFSAPAEEVI---------------GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAE 128
+F+GY + YR+YN E K + ++R+V F+E TS RG +H+ + + A +E+ R I +KW+ K KL DGSV +YKARLVA+GF Q D++ET A VAR+ T+ TI +LAA+
Sbjct: 474 IFVGYADGIKGYRLYNLEKKKIIINRDVIFNENAKSTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAHVARLETIHTIIALAAQ 628
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A5D3BEI7_CUCME (Putative copia-type polyprotein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3BEI7_CUCME) HSP 1 Score: 82.8 bits (203), Expect = 7.980e-16 Identity = 56/156 (35.90%), Postives = 80/156 (51.28%), Query Frame = 0
Query: 3 VFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEEDFETSHRGQPEHDGTRHMEGLFSAPA-----------EEVI---------------GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE 132
VF+GYD S Y++YN K +SR+V FDEE S E + + E L A EE+ G+ A+ +KW+ K K E G V RYKARLVA+G+SQ + D+ E APVAR+ T+R + +LAA+ +++
Sbjct: 416 VFVGYDASSKGYKLYNLVTKKTIVSRDVVFDEE---ASWNWNDEPEDYKFFEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWKLSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWK 568
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A5S9XFM1_ARATH (Uncharacterized protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A5S9XFM1_ARATH) HSP 1 Score: 82.8 bits (203), Expect = 8.100e-16 Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 0
Query: 3 VFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEEDFETSHRGQPEHDGTRHMEGLFSAPAEEVIGRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAA 127
VFLGY Y++ + + V +SRNV F E F P HD T + P + V+G KW+ K DG+V RYKARLVA+GF+Q E D+FET +PVA++++++ I LAA
Sbjct: 618 VFLGYASGYKGYKVLHLDTNLVSVSRNVIFHEHVF-------PFHDIT-----IAHPPGKNVVG-----CKWVFTIKYNSDGTVERYKARLVAKGFTQQEGVDYFETFSPVAKLASVKLILGLAA 725
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: UPI00155AC425 (uncharacterized protein LOC117909087 n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155AC425) HSP 1 Score: 82.4 bits (202), Expect = 1.080e-15 Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = 0
Query: 1 MGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEEDFETSHRGQPEHDGTRHMEGLFSAPAEEVI-GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDF 131
+G FL YD+ SP++R + +Q+ RN+ +E F+ + R +E + ++ G+ + KWI K K DG+V RYKARLVA+GF+Q D+ ET APVA+++T+R + SLAA LD+
Sbjct: 537 IGNFLSYDKLSPTFRAFTSSITEIQVPRNI---QEAFKYPKWKAAVDEEVRELEKNGTWEITDLPRGKKPVGCKWIFTVKYKADGNVDRYKARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDW 665
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A2K3M5H6_TRIPR (Retrotransposon protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M5H6_TRIPR) HSP 1 Score: 82.0 bits (201), Expect = 1.310e-15 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 0
Query: 66 GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE 132
G+ AI +KW+ K K EDGSV +YKARLVA+G+SQ DF ET APVARM T+RT+ +LAA+L+ +
Sbjct: 22 GKEAIGLKWVYKTKYNEDGSVQKYKARLVAKGYSQQPGVDFNETFAPVARMETIRTVLALAAQLELQ 88
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A2N9EW08_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EW08_FAGSY) HSP 1 Score: 82.0 bits (201), Expect = 1.480e-15 Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 0
Query: 66 GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE 132
GR I +KWI K K KEDGS+ ++KARLVA+G++Q R DF ET APV RM T+RT+ +LAA+++ +
Sbjct: 628 GREVIGLKWIYKTKFKEDGSIQKHKARLVAKGYAQQPRVDFHETFAPVVRMETIRTVLALAAQMELQ 694
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: Q94EV3_MAIZE (Fourf gag/pol protein n=2 Tax=Zea mays TaxID=4577 RepID=Q94EV3_MAIZE) HSP 1 Score: 82.0 bits (201), Expect = 1.510e-15 Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 0
Query: 53 MEGLFSAPAEEVIGRAAICM----KWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAA 127
ME + S EV+ R C KWI K+KL+ DG++ RYKARLVA+G++Q E EDFF+T +PVAR++T+RT+ ++AA
Sbjct: 790 MESIMSNGTWEVVDRPYGCQPIGCKWIFKKKLRPDGTIERYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRTLIAVAA 868 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig22469.5978.1 ID=prot_H-paniculata_contig22469.5978.1|Name=mRNA_H-paniculata_contig22469.5978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bpback to top |