prot_H-paniculata_contig22349.5948.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22349.5948.1
Unique Nameprot_H-paniculata_contig22349.5948.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: D7G288_ECTSI (D-lactate dehydrogenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G288_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 3.880e-17
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            MKDNV+S+TVVLADGQ VKTSSRAKKSSAGYDLTRLF+GSEGTLG
Sbjct:  119 MKDNVLSMTVVLADGQEVKTSSRAKKSSAGYDLTRLFVGSEGTLG 163          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: A0A1H4JRH8_9HYPH (D-lactate dehydrogenase (Cytochrome) n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4JRH8_9HYPH)

HSP 1 Score: 79.0 bits (193), Expect = 5.190e-16
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            MKDNV+SLTVV+ DG++VKT+SRAKKSSAGYDLTRLFIG+EGTLG
Sbjct:  171 MKDNVLSLTVVMPDGEIVKTASRAKKSSAGYDLTRLFIGAEGTLG 215          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: UPI00126122C6 (FAD-binding protein n=1 Tax=Aureimonas psammosilenae TaxID=2495496 RepID=UPI00126122C6)

HSP 1 Score: 78.6 bits (192), Expect = 7.080e-16
Identity = 38/45 (84.44%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            M++NVV+LTVVLADG+VVKT+SRA+KSSAGYDLTRLF+GSEGTLG
Sbjct:  165 MRENVVALTVVLADGRVVKTASRARKSSAGYDLTRLFVGSEGTLG 209          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: A0A1H0HV71_9HYPH (D-lactate dehydrogenase (Cytochrome) n=2 Tax=Aureimonas TaxID=414371 RepID=A0A1H0HV71_9HYPH)

HSP 1 Score: 78.6 bits (192), Expect = 7.100e-16
Identity = 37/45 (82.22%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            M++NVVSLTVV+ADG++VKT+SRA+KSSAGYDLTRLF+GSEGTLG
Sbjct:  165 MRENVVSLTVVMADGRIVKTASRARKSSAGYDLTRLFVGSEGTLG 209          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: A0A2T1HW62_9HYPH (FAD-binding oxidoreductase n=1 Tax=Alsobacter soli TaxID=2109933 RepID=A0A2T1HW62_9HYPH)

HSP 1 Score: 78.6 bits (192), Expect = 7.110e-16
Identity = 38/45 (84.44%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            M++NV+SLTVVLADG+VVKT+SRA+KSSAGYDLTRLF+GSEGTLG
Sbjct:  169 MRENVLSLTVVLADGRVVKTASRARKSSAGYDLTRLFVGSEGTLG 213          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: N2JJ92_9PSED (Glycolate oxidase, subunit GlcD n=9 Tax=Pseudomonas TaxID=286 RepID=N2JJ92_9PSED)

HSP 1 Score: 78.2 bits (191), Expect = 9.700e-16
Identity = 36/45 (80.00%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            M++NV+SLTVVLADGQ++KT++RA+KSSAGYDLTRLF+GSEGTLG
Sbjct:  165 MRENVLSLTVVLADGQIIKTANRARKSSAGYDLTRLFVGSEGTLG 209          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: UPI0019C44FB5 (Lactate dehydrogenase n=2 Tax=Alsobacter metallidurans TaxID=340221 RepID=UPI0019C44FB5)

HSP 1 Score: 78.2 bits (191), Expect = 9.830e-16
Identity = 37/45 (82.22%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            M++NV++LTVVLADG+VVKT+SRA+KSSAGYDLTRLF+GSEGTLG
Sbjct:  181 MRENVIALTVVLADGKVVKTASRARKSSAGYDLTRLFVGSEGTLG 225          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: UPI000FFCA301 (FAD-binding protein n=1 Tax=Larkinella soli TaxID=1770527 RepID=UPI000FFCA301)

HSP 1 Score: 77.8 bits (190), Expect = 1.310e-15
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            MKDNV+SLTVVL DG VVKT S+A+KSSAGYDLTRLFIGSEGTLG
Sbjct:  154 MKDNVLSLTVVLPDGSVVKTGSKARKSSAGYDLTRLFIGSEGTLG 198          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: A0A512BLJ9_9HYPH (Oxidoreductase n=1 Tax=Microvirga aerophila TaxID=670291 RepID=A0A512BLJ9_9HYPH)

HSP 1 Score: 77.8 bits (190), Expect = 1.330e-15
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            MKD V+SLT VLADGQ+VKT+SRA+KSSAGYDLTRLF+GSEGTLG
Sbjct:  171 MKDAVLSLTAVLADGQIVKTASRARKSSAGYDLTRLFVGSEGTLG 215          
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Match: A0A7V7TXR6_9HYPH (FAD-binding protein n=2 Tax=Aureimonas leprariae TaxID=2615207 RepID=A0A7V7TXR6_9HYPH)

HSP 1 Score: 77.8 bits (190), Expect = 1.370e-15
Identity = 37/45 (82.22%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG 45
            M+DNVVSL VVLADG++V+T++RAKKSSAGYDLTRLF+GSEGTLG
Sbjct:  246 MRDNVVSLAVVLADGRIVRTATRAKKSSAGYDLTRLFVGSEGTLG 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22349.5948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G288_ECTSI3.880e-1791.11D-lactate dehydrogenase, putative n=1 Tax=Ectocarp... [more]
A0A1H4JRH8_9HYPH5.190e-1684.44D-lactate dehydrogenase (Cytochrome) n=2 Tax=Hypho... [more]
UPI00126122C67.080e-1684.44FAD-binding protein n=1 Tax=Aureimonas psammosilen... [more]
A0A1H0HV71_9HYPH7.100e-1682.22D-lactate dehydrogenase (Cytochrome) n=2 Tax=Aurei... [more]
A0A2T1HW62_9HYPH7.110e-1684.44FAD-binding oxidoreductase n=1 Tax=Alsobacter soli... [more]
N2JJ92_9PSED9.700e-1680.00Glycolate oxidase, subunit GlcD n=9 Tax=Pseudomona... [more]
UPI0019C44FB59.830e-1682.22Lactate dehydrogenase n=2 Tax=Alsobacter metallidu... [more]
UPI000FFCA3011.310e-1586.67FAD-binding protein n=1 Tax=Larkinella soli TaxID=... [more]
A0A512BLJ9_9HYPH1.330e-1584.44Oxidoreductase n=1 Tax=Microvirga aerophila TaxID=... [more]
A0A7V7TXR6_9HYPH1.370e-1582.22FAD-binding protein n=2 Tax=Aureimonas leprariae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016169FAD-binding, type PCMH, subdomain 2GENE3D3.30.465.10coord: 1..45
e-value: 1.3E-17
score: 65.9
NoneNo IPR availablePANTHERPTHR11748:SF111D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATEDcoord: 1..45
NoneNo IPR availablePANTHERPTHR11748D-LACTATE DEHYDROGENASEcoord: 1..45
NoneNo IPR availablePANTHERPTHR11748:SF116coord: 1..45
IPR016166FAD-binding domain, PCMH-typePROSITEPS51387FAD_PCMHcoord: 1..45
score: 8.812
IPR036318FAD-binding, type PCMH-like superfamilySUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22349contigH-paniculata_contig22349:196..330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22349.5948.1mRNA_H-paniculata_contig22349.5948.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22349 196..342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22349.5948.1 ID=prot_H-paniculata_contig22349.5948.1|Name=mRNA_H-paniculata_contig22349.5948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MKDNVVSLTVVLADGQVVKTSSRAKKSSAGYDLTRLFIGSEGTLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016169FAD-bd_PCMH_sub2
IPR016166FAD-bd_PCMH
IPR036318FAD-bd_PCMH-like_sf