prot_H-paniculata_contig22345.5947.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22345.5947.1
Unique Nameprot_H-paniculata_contig22345.5947.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: D7G6L3_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L3_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 3.470e-37
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 MPALYDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQWFVCDDQDCRPVDEANVRTAAAYVLFYRRRPL 69
            M ALYDLFAVSNHMGGMGHGHYTAFVRDW+ SGMS+ W VCDD DCRPV EA VRTA AYVLFYRRRPL
Sbjct:  106 MSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPL 174          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A6H5L229_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L229_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 8.690e-34
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 MPALYDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQWFVCDDQDCRPVDEANVRTAAAYVLFYRRRPL 69
            M ALYDLFAVSNHMGGMGHGHYTAFVRDW+ SGMS+ W VCDD DCRPV EA VRTA AYVLFYRRRPL
Sbjct: 1624 MSALYDLFAVSNHMGGMGHGHYTAFVRDWEGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRRPL 1692          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A7S2P145_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P145_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.470e-20
Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    1 MPALYDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQWFVCDDQDCRPVDEANVRTAAAYVLFYRRR 67
            +PA+YDLF V+NH G MG GHYTA  R WDDSGM   W + DD +   +DE NV T AAYVLFYRRR
Sbjct:  524 IPAVYDLFGVTNHYGRMGFGHYTACCRQWDDSGMGEDWSLFDDSNVTEMDETNVITPAAYVLFYRRR 590          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A2D4CH16_PYTIN (Ubiquitin-specific protease, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CH16_PYTIN)

HSP 1 Score: 82.8 bits (203), Expect = 3.140e-19
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    5 YDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQ-WFVCDDQDCRPVDEANVRTAAAYVLFYRRRPL 69
            YDLFAVSNH GGMG GHYTAF R+W+D+G     W+  DD    PV    V+++AAY+LFY+RR L
Sbjct:   20 YDLFAVSNHYGGMGFGHYTAFARNWNDAGEKYPGWYSFDDSQVSPVMPGQVKSSAAYILFYKRRCL 85          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A448ZDP4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDP4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.620e-18
Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    1 MPALYDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQWFVCDDQDCRPVDEANVRTAAAYVLFYRRR 67
            +PA YDLFAV NH G +G GHYT+F   WD++G+S++W   DD    PV+ + V+++AAY+LFYRRR
Sbjct: 1160 VPADYDLFAVVNHYGRLGFGHYTSFAMQWDETGISKEWNAFDDSSVHPVEPSEVQSSAAYILFYRRR 1226          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A7S2A1U5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A1U5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.000e-18
Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    1 MPALYDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQWFVCDDQDCRPVDEANVRTAAAYVLFYRRR 67
            +PA+YDLFAV+NH G MG GHYTA+ R W++ GMS QW   DD +   +  + V T AAYVLFYRRR
Sbjct:  814 VPAIYDLFAVTNHYGRMGFGHYTAYARKWNEDGMSDQWAAFDDSNVGGIKPSMVVTPAAYVLFYRRR 880          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A1Z5JW65_FISSO (Ubiquitin carboxyl-terminal hydrolase 4/11 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JW65_FISSO)

HSP 1 Score: 85.1 bits (209), Expect = 1.050e-17
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 MPALYDLFAVSNHMGGMGHGHYTAFVRDWDD-SGMSRQWFVCDDQDCRPVDEAN--VRTAAAYVLFYRRR 67
            +PA+YDLFAV+NH G +G GHYTAF R W++ +G+S  W + DD   RPV  AN  + T AAYVLFYRRR
Sbjct: 1121 VPAIYDLFAVTNHYGRLGAGHYTAFARSWNERTGISDDWCLFDDSSVRPVSNANDAIVTPAAYVLFYRRR 1190          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A1Z5KR46_FISSO (Ubiquitin carboxyl-terminal hydrolase 4/11 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR46_FISSO)

HSP 1 Score: 84.7 bits (208), Expect = 1.430e-17
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 MPALYDLFAVSNHMGGMGHGHYTAFVRDWDD-SGMSRQWFVCDDQDCRPVDEAN--VRTAAAYVLFYRRR 67
            +PA+YDLFAV+NH G +G GHYTAF R W++ +G+S  W + DD   RPV  AN  + T AAYVLFYRRR
Sbjct: 1127 VPAIYDLFAVTNHYGRLGAGHYTAFARSWNERTGISDDWCLFDDSSVRPVPNANDAIVTPAAYVLFYRRR 1196          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A7S2S141_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S141_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.020e-16
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    1 MPALYDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQWFVCDDQDCRPVDEAN-------VRTAAAYVLFYRRR 67
            +P++YDLFAV+NH G MG GHYTAF R W+++GM   W   DD + + V + +       + T+AAYVLFYRRR
Sbjct:  143 VPSIYDLFAVTNHYGRMGFGHYTAFARRWNENGMESDWANFDDSNVQSVGDGHGHVNGVKMATSAAYVLFYRRR 216          
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Match: A0A6S8PAR9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8PAR9_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.370e-16
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    2 PALYDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQWFVCDDQDCRPVDEANVRTAAAYVLFYRRRPL 69
            PA+YDLF V NH G MG GHYTAF R+W++ G    W + DD     V   NV + AAYVLFYRRRP+
Sbjct: 1072 PAIYDLFGVVNHYGRMGFGHYTAFCREWNELGEMSSWSLFDDSAVSSVVGNNVVSPAAYVLFYRRRPV 1139          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22345.5947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6L3_ECTSI3.470e-3785.51USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L229_9PHAE8.690e-3485.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2P145_9STRA1.470e-2062.69Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2D4CH16_PYTIN3.140e-1957.58Ubiquitin-specific protease, putative n=1 Tax=Pyth... [more]
A0A448ZDP4_9STRA1.620e-1853.73Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2A1U5_9STRA3.000e-1858.21Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dity... [more]
A0A1Z5JW65_FISSO1.050e-1758.57Ubiquitin carboxyl-terminal hydrolase 4/11 n=1 Tax... [more]
A0A1Z5KR46_FISSO1.430e-1758.57Ubiquitin carboxyl-terminal hydrolase 4/11 n=1 Tax... [more]
A0A7S2S141_9STRA1.020e-1650.00Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6S8PAR9_9STRA2.370e-1655.88Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 1..69
e-value: 1.5E-22
score: 82.1
NoneNo IPR availablePANTHERPTHR21646:SF24FI20021P1coord: 4..67
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 4..67
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 5..64
e-value: 1.3E-15
score: 57.6
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 5..22
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..67
score: 18.731
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22345contigH-paniculata_contig22345:2764..2970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22345.5947.1mRNA_H-paniculata_contig22345.5947.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22345 2752..2970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22345.5947.1 ID=prot_H-paniculata_contig22345.5947.1|Name=mRNA_H-paniculata_contig22345.5947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
MPALYDLFAVSNHMGGMGHGHYTAFVRDWDDSGMSRQWFVCDDQDCRPVD
EANVRTAAAYVLFYRRRPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf