mRNA_H-paniculata_contig22333.5942.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE) HSP 1 Score: 247 bits (630), Expect = 3.010e-70 Identity = 196/307 (63.84%), Postives = 205/307 (66.78%), Query Frame = 1
Query: 1 VKVIHKWPRPAL---------------------PTVAEPLPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYEQKILPAEKAAA 858
VKVIHKWPRP L LPPPCLSWGP QP+ A APPMALLARGWGN+IQILAATRV D GG XXXX A WP LAVVKEL+ASA VVAVEWLREQVLAYLD +MELCVLDTRAG ELEHASLSTL ++ SPILPXXXXXXXXXXXXXXXXXXXXXX XXXXXXX GTYHNAFRACEGRL+LLG QELRAVRVQ WSQRV+SLV AGEWLEALAVALDH+EQKILPAE AAA
Sbjct: 642 VKVIHKWPRPPLFSGXXXXXXXXXXXXXXXXXXXXXXGHLPPPCLSWGPSQPSAARAQ------APPMALLARGWGNSIQILAATRV-DAGGRGGAGXXXXRGG--------ARWPGLAVVKELSASAPVVAVEWLREQVLAYLDTDMELCVLDTRAGTELEHASLSTLSVSISPILPXXXXXXXXXXXXXXXXXXXXXXGTQAAGTRSGPAESTLXXXXXXXP-----------------GTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQKILPAENAAA 916
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: D8LRX0_ECTSI (Vps8 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX0_ECTSI) HSP 1 Score: 108 bits (269), Expect = 2.730e-22 Identity = 77/126 (61.11%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1 VKVIHKWPRPALPTVAEP--------LPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQ 354
VKVIHKWPRP L T PPPCLSWGPPQP+ A APPMALLARGWGN+IQILAATRV D GG XXXX A WP LAVVKEL+ASA VVAVEWLREQ
Sbjct: 665 VKVIHKWPRPPLFTGXXXXXXXXXGHFPPPCLSWGPPQPSAARAQ------APPMALLARGWGNSIQILAATRV-DAGGRGGAGXXXXRGG--------ARWPGLAVVKELSASAPVVAVEWLREQ 775
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: K3X190_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X190_GLOUD) HSP 1 Score: 91.3 bits (225), Expect = 1.110e-16 Identity = 83/287 (28.92%), Postives = 124/287 (43.21%), Query Frame = 1
Query: 1 VKVIHKWPRPALPTVAEP-LPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYEQ-KILPAEKAA 855
VKV+++W RP + +P LP +W + G+ R+ P +L+RGWGN +Q L VV GG R WP ++ S ++A++WL +QV+ YL++ E+CV D + ELE +S+L + + ++ N+FR C+ L+LLG +EL+ RVQ W+QR+D+LV GEWLEALA+ALDHYE KI A++AA
Sbjct: 406 VKVLYRWARPDDISPEDPVLPSLAFAW-----ISFPGSSRALAP-----VLSRGWGNHVQFL---EVVFPGGQNHSH-------------SRHGWPTFEEHDQIECSNDLMAIQWLGDQVVVYLNSNDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR------------------------------------------------------------SFSNSFRGCDNILYLLGLKELQTARVQPWTQRIDTLVDEGEWLEALALALDHYEGLKIAAADRAA 606
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: F0VYQ3_9STRA (Vacuolar protein sortingassociated protein 8 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VYQ3_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.950e-16 Identity = 79/276 (28.62%), Postives = 118/276 (42.75%), Query Frame = 1
Query: 1 VKVIHKWPRPALPTVAEP-LPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYE 825
VKVI++W RPA T +P LP SW G+ R P +LAR WG +Q L +V GG R WP + ++ V+A++WL EQ++AYL+A+ E+CV D + ELE +++L + + ++ N+FRAC+ L+LLG QEL++ RVQ W+QR+D+L+ GEW+EALA+ALD++E
Sbjct: 456 VKVIYRWARPADVTDEDPVLPSLAFSW-----VAFPGSARWVAP-----ILARAWGKHVQFL---ELVFTGGPNHSH-------------SRHGWPAFEEHTPVESTQDVMAIQWLGEQIVAYLNAKDEICVYDVLSRQELEIVDVTSLDLVFASYRGKNAR------------------------------------------------------------SFSNSFRACDNGLYLLGLQELKSARVQPWTQRIDTLIDQGEWMEALALALDNFE 645
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: A0A024G3A1_9STRA (Vps8 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3A1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 6.420e-16 Identity = 78/276 (28.26%), Postives = 117/276 (42.39%), Query Frame = 1
Query: 1 VKVIHKWPRPALPTVAEP-LPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYE 825
VKVI +WPRPA + +P LP SW G+ R P +LAR WG +Q L ++ GG R WP + + V+A++WL EQ++AYL+A+ E+CV D + ELE +++L + + ++ N+FRAC+ L+LLG QEL++ RVQ W+QR+D+L+ GEW+EALA+ALD++E
Sbjct: 447 VKVIFRWPRPADVSDEDPVLPSLAFSW-----VAFPGSTRWVAP-----ILARAWGKHVQFL---ELILTGGPNHSH-------------SRHGWPTFEEHAPVENAQDVMAIQWLGEQIVAYLNAKDEICVYDVLSRQELEIVDVASLDLVFASYRGKNAR------------------------------------------------------------SFSNSFRACDNGLYLLGLQELKSARVQPWTQRIDTLIDQGEWMEALALALDNFE 636
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: A0A8K1FDH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDH6_PYTOL) HSP 1 Score: 89.4 bits (220), Expect = 6.430e-16 Identity = 79/286 (27.62%), Postives = 122/286 (42.66%), Query Frame = 1
Query: 1 VKVIHKWPRPALPTVAEP-LPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYEQ-KILPAEKA 852
VK++H+W RP +P LP +W + G+ R+ P +LARGWG +Q L VV GG + WP ++ +S+ +A++WL +QV+ YL++ E+CV D + ELE +S+L + + ++ N+FR C+ L+LLG +EL+ RVQ W+QR+D+LV G+WLEALA+ALDHYE K+ A++A
Sbjct: 397 VKILHRWMRPEEIGADDPVLPSLAFAW-----ISFPGSSRALAP-----VLARGWGKHVQFL---EVVFPGGQNHSH-------------SKHGWPTFEEHDQIESSSDTMAIQWLGDQVVVYLNSHDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR------------------------------------------------------------SFSNSFRGCDNILYLLGLKELQTARVQPWTQRIDTLVEEGQWLEALALALDHYEGLKVAAADRA 596
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: A0A5D6XX63_9STRA (Vps8 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX63_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.660e-16 Identity = 83/287 (28.92%), Postives = 123/287 (42.86%), Query Frame = 1
Query: 1 VKVIHKWPRPALPTVAEP-LPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYEQ-KILPAEKAA 855
VKV+++W RP V +P LP +W + G+ R+ P +LARGWG+ +Q L VV GG R WP +L + ++A++WL +QV+ YL+A E+CV D + ELE +S+L + + ++ N+FR + L+LLG +EL+ RVQ W+QR+D+LV GEWLEALA+ALDHYE K+ A++AA
Sbjct: 416 VKVLYRWARPDDIAVDDPVLPSLAFAW-----ISFPGSSRALAP-----VLARGWGSYVQFL---EVVFPGGPPHMHA-------------RHGWPTFEEHDQLECATDIMAIQWLGDQVVVYLNASDEICVYDVMSRQELEVVDVSSLELVFASYRGKNAR------------------------------------------------------------SFSNSFRGGDNILYLLGLKELQTARVQPWTQRIDTLVDEGEWLEALALALDHYEGLKVAAADRAA 616
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: A0A662WX84_9STRA (Chromo domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WX84_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.190e-15 Identity = 84/286 (29.37%), Postives = 122/286 (42.66%), Query Frame = 1
Query: 1 VKVIHKWPRPALPTVAEP-LPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYEQ-KILPAEKA 852
V+V+++W RP +P LP +W + G+ R+ P +LARGWGN +Q L VV GG R +P ++ S+ V+AV+WL +QV+ YL++ E+CV D + ELE +S+L + + ++ N+FR C L+LLG +EL+ RVQ W+QR+DSLV GEWLEALA+ALDHYE KI A++A
Sbjct: 685 VRVLYRWTRPDDIAADDPVLPSLAFAW-----ISFPGSSRALAP-----VLARGWGNRVQFL---EVVFPGGKGHTHA-------------RHGFPTFDEHDQIECSSDVMAVQWLGDQVVVYLNSHDEICVYDVMSRQELEMVDVSSLELVFASYRGKNAR------------------------------------------------------------SFSNSFRGCYNILYLLGLKELQTARVQPWTQRIDSLVDEGEWLEALALALDHYEGLKIAAADRA 884
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: A0A2P4Y7R6_9STRA (Glucosidase 2 subunit beta (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y7R6_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 5.020e-15 Identity = 86/294 (29.25%), Postives = 124/294 (42.18%), Query Frame = 1
Query: 1 VKVIHKWPRP--------ALPTVAEPLPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYEQ-KILPAEKAA 855
V+VI++W RP LPT+A +W + G+ R+ P +LARGWGN +Q L VV GG R +P ++ +S+AV+AV+WL +QV+ YL++ E+CV D + ELE +S+L + + ++ N+FR C L+LLG +EL+ RV W+QR+D LV GEWLEALA+ALDHYE KI A++AA
Sbjct: 976 VRVIYRWARPDDIAPDDPVLPTLA-------FAW-----ISFPGSSRALAP-----VLARGWGNRVQFL---EVVFPGGKNHSHA-------------RHGFPTFDEHDQIESSSAVMAVQWLGDQVVVYLNSHDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR------------------------------------------------------------SFSNSFRGCYNILYLLGLKELQTARVLPWTQRIDLLVDDGEWLEALALALDHYEGLKIAAADRAA 1176
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Match: G4Z679_PHYSP (Vps8 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z679_PHYSP) HSP 1 Score: 86.7 bits (213), Expect = 5.130e-15 Identity = 86/294 (29.25%), Postives = 124/294 (42.18%), Query Frame = 1
Query: 1 VKVIHKWPRP--------ALPTVAEPLPPPCLSWGPPQPATAAGTPRSGPPAPPMALLARGWGNTIQILAATRVVDVGGXXXXXXXXXXXXXXXXGTKRAVWPRLAVVKELTASAAVVAVEWLREQVLAYLDAEMELCVLDTRAGAELEHASLSTLGIARSPILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEKTPQLPLGTYHNAFRACEGRLFLLGSQELRAVRVQQWSQRVDSLVAAGEWLEALAVALDHYEQ-KILPAEKAA 855
V+VI++W RP LPT+A +W + G+ R+ P +LARGWGN +Q L VV GG R +P ++ +S+AV+AV+WL +QV+ YL++ E+CV D + ELE +S+L + + ++ N+FR C L+LLG +EL+ RV W+QR+D LV GEWLEALA+ALDHYE KI A++AA
Sbjct: 357 VRVIYRWARPDDIAPDDPVLPTLA-------FAW-----ISFPGSSRALAP-----VLARGWGNRVQFL---EVVFPGGKNHSHA-------------RHGFPTFDEHDQIESSSAVMAVQWLGDQVVVYLNSHDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR------------------------------------------------------------SFSNSFRGCYNILYLLGLKELQTARVLPWTQRIDLLVDDGEWLEALALALDHYEGLKIAAADRAA 557 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22333.5942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22333.5942.1 >prot_H-paniculata_contig22333.5942.1 ID=prot_H-paniculata_contig22333.5942.1|Name=mRNA_H-paniculata_contig22333.5942.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp VKVIHKWPRPALPTVAEPLPPPCLSWGPPQPATAAGTPRSGPPAPPMALLback to top mRNA from alignment at H-paniculata_contig22333:344..2445+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22333.5942.1 ID=mRNA_H-paniculata_contig22333.5942.1|Name=mRNA_H-paniculata_contig22333.5942.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2102bp|location=Sequence derived from alignment at H-paniculata_contig22333:344..2445+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22333:344..2445+ >mRNA_H-paniculata_contig22333.5942.1 ID=mRNA_H-paniculata_contig22333.5942.1|Name=mRNA_H-paniculata_contig22333.5942.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1914bp|location=Sequence derived from alignment at H-paniculata_contig22333:344..2445+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |