mRNA_H-paniculata_contig22319.5937.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A4S4K685_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K685_9APHY) HSP 1 Score: 230 bits (587), Expect = 1.650e-67 Identity = 143/440 (32.50%), Postives = 216/440 (49.09%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSP----------------------------------------------------------------FLSRHT--VYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTE-YGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKG---STTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQR 1110
VA+GF+Q+EG D ET AP ++ ++C++ +L A HD ++ MDV +A+LN + +E++++ PP F +S HT + + K D+ F M DLG +L +E+ RDRP T+T++Q Y +L C + +++ S+ G + Y M+GSLMYA+TG RPD+AY V ++ P + + KR++RYL D I+++ + + G VDA+WA DV R+S TGY+F L GGAISW S+KQ S+TE EY+AA + KE ++LR LL FGC S L +N+S I L K + H RTKHI +R+H IR+ G + + Y DQ+A I+T+ L+R K +R
Sbjct: 62 VARGFTQIEGIDYNETFAPVSKFTSICSLLALTAHHDLEIHQMDVKSAFLNGDLNKEIYMQCPPGFEAKDSKVWKLNKSLYGLKQASRKWYKRVCAKFKAMGFTRSDYDHAIFFKLEDGHLLIAAVYVNDMLLVSDHTPVIQKLKSDLSTRFEMTDLGEAHWILNMEIVRDRPRNTLTLTQRQYTETILN------CFSLALSTPMVPNKKLEKLSKPEDGIDVKLYQSMLGSLMYAMTGTRPDLAYTVGVLSQHSATPGNAHINAMKRVYRYLRGTLDYRIVYSSERHSDLI-GYVDADWAADVSSRQSITGYVFLLAGGAISWSSKKQSSTALSTTEAEYMAASDASKEAIWLRGLLHE--FGCLNPSYSVLLMIDNQSAIALVKNAEFHSRTKHIAIRYHFIRKIHDRGDILVEYCPTGDQVADIMTKALAREKHER 492
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: X1WUQ9_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WUQ9_ACYPI) HSP 1 Score: 236 bits (601), Expect = 3.030e-66 Identity = 131/399 (32.83%), Postives = 222/399 (55.64%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPA----------------------------FSPFLSRHTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQRL 1113
VAQGFSQ EG D ++T +P A++ TL + ++A + ++ L+ +DV A+L + E+++++ P F ++++ E K + F M+D G L+ LG+++ D+ G + I+Q Y+ +VLK + D C + S + +QE ++ + Y +VGSLMYA+ G+RPD++YA++ R P + +++ KR+ RY+ + G+ F +SN L G VDA+WA DRKSTTGY+FK+ +SW +++Q V SSTE EY+A E +++R+LL+ + G LFE+N+ I+LS H R+KHI + H +RE+++E L+++ Y+ S+QLA +L++GL +F+RL
Sbjct: 586 VAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMILKLNKSLYGLKQASKCWHERFDNYIAK---LEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLN--IQEDNKQECNQP--YRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNKCHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKVKEELIELKYIPTSNQLADLLSKGLGNEQFKRL 977
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A438FT54_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FT54_VITVI) HSP 1 Score: 227 bits (578), Expect = 1.000e-65 Identity = 146/444 (32.88%), Postives = 232/444 (52.25%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAF-----------------------SPFLSR----------------HTVY------------------------------EFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQRLRNLL 1125
VA+G+ Q G D E AP A++ T+ V S+AA++ + + +DV +A+L+ +EEE+++ PP + + SR HT+Y +FK+ +++ F M D+G + LGIEV + + + ISQ Y E+L + +C + S++G + +S G+ ST Y +VGSLMY LT RPDI +AV+ +R ME+P + KRIFRYL D GI++ R L G D+++A D+ DRKST+G +F L+ GAI+W S+KQQ+VT S+TE E+VAA + ++LR LLE + +G T ++ +N S I LSK H R+KHI +R+H +R+ ++G++ + + + DQ+A ILT+ L + F +LR++L
Sbjct: 93 VAKGYKQEFGVDYKEVFAPVAKLDTIRLVLSMAAQNSWSIHQLDVKSAFLHGELEEEVYIDQPPGYVKQGYENQVYKLKKALYGLKQAPRAWYSRIDAYFIEEGFIKCPYEHTLYTKYGVDKKILIVCLYVDDLIYTSNNKTMLADFKKSMMKGFDMTDMGLMHYFLGIEVVQS--SAGVFISQKKYALEILDKFMLKDCNSVI--TPSEVGLKLSKSGAGKRVDSTLYKQIVGSLMY-LTSTRPDIMHAVNLISRYMENPTEVHLLAAKRIFRYLKGTVDFGILYK-RGERSSLIGFSDSDYAGDLDDRKSTSGAVFMLNSGAITWSSKKQQIVTLSTTEAEFVAAASSSCQAIWLRRLLEVLYNQQQGPTVIYCDNLSAIKLSKNLVLHGRSKHIDVRYHFLRDLCKDGVIDLVFCKSEDQIADILTKPLKPVVFMKLRSML 530
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A3S3PWW7_9ACAR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PWW7_9ACAR) HSP 1 Score: 226 bits (576), Expect = 3.650e-65 Identity = 146/440 (33.18%), Postives = 222/440 (50.45%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAF---------------------SPFLSRHTVYEF----------------------------------------------KQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRS-GKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQRLR 1116
VA+G++Q G D ET AP A+ T+ + ++AA D +++ M V A+L ++EE +++ P F +P + T+++F K D+ + F M DLG L+ LGIE+ R R +I +SQ YI +LK + E + ++ + + G QE S +S + Y +VGSLMYA+ R DIA +V +R M + +F KR+ RYL+ D +M + L G DA+W + DRKST+GY+F+L G ++SW S+KQQ V SSTE EY+A +E V+LR LL+ IGF + TT+FE+N++ I L+K + H RTKHI +R H IRE++ GL++I Y+ + +A ILT+ L +FQ LR
Sbjct: 141 VAKGYTQKYGIDFEETFAPVAKFTTIRTLLTIAAMMDLEIKQMGVKTAFLYGEMQEEAYMEQPEGFVIPGKEHLVCKLRKSIYGLKQAPRMWNSTIHKFFIKNGFKQCQSDWCLYVQTVEKVLFVLIYVDDLIIASSNTQAIEKLKNDMSKIFSMTDLGELNYFLGIEIIRIREKKSILLSQKRYIMRLLKRFHMQESKPAITPI--EFGYKFQEKSEEKSQNEKIPYREIVGSLMYAMVCTRRDIAASVGILSRYMNNFTHSHFKAAKRVLRYLNGTRDFALML--KPENEALIGYSDADWGGNTDDRKSTSGYLFQLGGSSLSWNSKKQQTVALSSTEAEYMALSTATQECVWLRNLLQEIGFKQEMPTTIFEDNQACIKLTKSTKNHARTKHIDIRHHFIREKVDSGLVEIEYMSSEEMIADILTKPLPGPRFQILR 576
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 233 bits (595), Expect = 5.040e-65 Identity = 148/438 (33.79%), Postives = 213/438 (48.63%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLSR-----HTVYEFKQ----------------------------------------------DII-----------------RCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQR 1110
VA+GF+QVEG D ET AP + +L + +LAA+ D ++ MDV AYL+ +EEE++++ P F + +VY KQ DII R F M DLG + VLG+EV RDR TI +SQ Y+ E+L+ G+ + R L++ ++ Y +GSLMYA+ G RPD+AY V ++ P + R F+YL D ++F G+ L G VDA+WA DV DR+S +GY F L GGA+SW S+KQ SSTE EY+AA KE +LR L IG CK +T L +N+S + +++ H RTKHI +R+H +RE++ G + + YV DQ+A +LT+GL + K +
Sbjct: 694 VAKGFTQVEGIDFDETFAPVVKFTSLRTLLALAAKEDLEVHQMDVKTAYLHGELEEEIYLQPPAGFGVPEGKVWKLIKSVYGLKQAGRVWYLRIKSEFEKLGYTRIDSDHSFFTKWAREDGTILYAAIYVDDIILVSNSMDALLEAKEALKRLFNMSDLGEVHWVLGLEVIRDRNARTIALSQRRYVEEILERAGYSDARPIATPALANEHMAKVDAPEV---DVLTYQSGIGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQRALVRAFKYLRGTADYQLVFDGKKPWE-LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU) HSP 1 Score: 233 bits (595), Expect = 8.290e-65 Identity = 151/448 (33.71%), Postives = 221/448 (49.33%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAF--------------------------------------------SPFLS----------------------RHTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMF---AGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGF---------GCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQR 1110
VA+GF+QVEG D +T AP ++ ++ V +LAA +D ++ MDV +A+LN ++EE+++ PP F S F+ R T+ FK + F M DLGS +LG+E+ RDR T++ISQ YI ++L+ +G CR + ++ E + Y +GSLMYA+ G+RPD+A+AV ++ P +++ R+FRYL DL + + + SNG G DA+WA DV DR+ST+G F L GGA+SW S+KQQ + SSTE EYVA KE ++LR LL+ + G K + L +N+S + L+K S H RTKHI +R H IR+ I G L+ YV DQ+A +LT+ L+R K R
Sbjct: 1057 VAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENGVILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNL---KLEKLSEATIDPKPYQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLRALLDDLAIPASISRSSPGSKVTPLLLVDNQSAMALAKNSTFHDRTKHIAVRHHFIRDEIERGTLEAEYVPTDDQVADVLTKALAREKHVR 1501
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A2N9GEP0_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GEP0_FAGSY) HSP 1 Score: 227 bits (578), Expect = 3.350e-64 Identity = 131/376 (34.84%), Postives = 214/376 (56.91%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLSRHTVYEFKQD---IIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSG----KSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQ 1107
VA+G+SQ G D E +P R ++ AV +L A+ D +LE +DV A+L+ +EEE+F+ P F + + V K+ + + F MKDLG+ ++LG+E+ RDR + +SQ +YI++VL+ + + + ++ + + + Y VG LMYA+ RPD+A+AV +R M +P R++++ K IFRYL + GI+F+ + + + G VDA++A +V DR+STTGY+F L G I W S Q +V S+TE EY+A E KE ++L+ L++ +G +G + +++S I L+K H RTKHI +R+H IRE I G + + V S+ A +LT+ ++ KF+
Sbjct: 355 VAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENLVCRLKKLKSLLYKEFEMKDLGAAKKILGMEIHRDRDARKLWLSQKNYIKKVLEKFSMLDAKPVSTSLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSEGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVTIAKFK 729
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A6A3CDW5_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CDW5_HIBSY) HSP 1 Score: 230 bits (587), Expect = 8.710e-64 Identity = 126/372 (33.87%), Postives = 221/372 (59.41%), Query Frame = 1
Query: 10 GFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLS---RHTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECR--GSLWAVLSDIGAGVQESSRGRSGKSTE--YGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKF 1104
G++Q EG D E +P R+ T+ V ++ A D LE +DV A+L+ ++EE+++ L P ++ + + E K + R F MKDLGS +++L +++ RDR N I +SQ +Y++++L + +C+ + + + + + SS K + Y VGSLM+A+ RPDIA AV +R M +P +++++T KRI RY+ ++ + + G + + G VD+++A D+ KSTTGY+FK+ GGA+SW S+ Q +V S+TE EYVAA + KE ++L+ LLE +G + ++F +++S ++L++ H RTKHI +++H IRE++ EG + + + D +A +T+ ++ KF
Sbjct: 717 GYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATLDLHLEQLDVKTAFLHGNLKEEIYM-LQPEDDMLVAGPNKDHIEELKAQLAREFEMKDLGSANKILEMQIHRDRSNRKIWLSQKNYLKKILSRFNMQDCKLISTPLPINFKLSSSMSPSSEEERMKMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMTNPGKEHWNTVKRILRYIKGTSNVALCYGG--SNLLINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQSVVATSTTEAEYVAATQASKEAIWLKMLLEELGHNQE-YVSVFCDSQSALHLARNPSFHSRTKHIRVQYHFIREKVEEGTVDMQKIHTKDNIADFMTKAINADKF 1084
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR) HSP 1 Score: 226 bits (575), Expect = 1.820e-63 Identity = 138/436 (31.65%), Postives = 213/436 (48.85%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLS-----RHTVYEFKQ-------------------------------------------------------------DIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQR 1110
VA+GF+QVEG D +T AP + ++ A+ +LAA+ D ++ MDV +A+LN ++EE+F+ PP F + R +Y KQ D+ + M DLG R+L I++ RDR TI ++Q Y+ +L G +CR + ++ + +T Y +GSLMYA+ G RPD+A+AV ++ P ++++ +++YL DL +++ G + G VDANWA DV DR+S TGY++ + G AISW S+KQ SSTE EY+A KE ++LR L+ I +T L +N+S + L+K + H RTKHI +R H IR+ + EG ++ YV DQ+A +LT+ L+R K R
Sbjct: 350 VAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEIFMACPPGFQGARNIVWQLRKALYGLKQASREWYKKIRAEFESLGFTRSNADHSVFYKNEDGVLLIVAVYIDDMLIFCNSLPAVEALKADLGSHYDMTDLGEARRILNIKIIRDRARRTIELTQRQYVESILTHQGMADCRPVSTPMAQNLKLLKLSDAEI---DATPYQSALGSLMYAMLGTRPDLAFAVGALSKHAAHPGEEHWTALMHVYKYLRATTDLRLVYDGNAKGEFPLCYVDANWASDVNDRRSVTGYVYIMSGAAISWSSKKQPSTALSSTEAEYMAMAGATKEALWLRTFLDEIQQLPAAATLLLVDNQSAMALAKNAAFHDRTKHIAVRHHFIRDELEEGHIRAEYVPTGDQVADVLTKALAREKHVR 782
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH) HSP 1 Score: 229 bits (584), Expect = 2.270e-63 Identity = 147/440 (33.41%), Postives = 224/440 (50.91%), Query Frame = 1
Query: 1 VAQGFSQVEGEDSFETSAPTARMPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAF------------------------------------------------------SPFL--------------SRHTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI*YVQISDQLAGILTEGLSRIKFQRLR 1116
VA+G+ Q G D +E AP A+ T+ + LAAE + + +DV +A+L+ ++E++FV+ P F S FL S + FK ++ F M DLG + LG+EV +D I I+Q Y E++K YG + C ++ G + ++ G + TE+ ++GSL Y LT RPD+ ++V+ +R ME P ++ KRI RY+ DLGI + R L G VD+++A DV DRKST+GY+F L GGAI+W S+KQ +VT S+TE E+V+A G + V+LR +LE IG +G T +F +N S I LSK H R+KHI +R+H +RE ++EG +++ Y +DQ+A I+T+ + R F+ LR
Sbjct: 891 VAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERG--IFINQRKYAAEIIKKYGMEGCNSVKNPIVP--GQKLTKAGAGDAVDPTEFKQLIGSLRY-LTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYE-RGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELR 1324 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22319.5937.1 >prot_H-paniculata_contig22319.5937.1 ID=prot_H-paniculata_contig22319.5937.1|Name=mRNA_H-paniculata_contig22319.5937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp MPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLSRback to top mRNA from alignment at H-paniculata_contig22319:2373..3777+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22319.5937.1 ID=mRNA_H-paniculata_contig22319.5937.1|Name=mRNA_H-paniculata_contig22319.5937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1405bp|location=Sequence derived from alignment at H-paniculata_contig22319:2373..3777+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22319:2373..3777+ >mRNA_H-paniculata_contig22319.5937.1 ID=mRNA_H-paniculata_contig22319.5937.1|Name=mRNA_H-paniculata_contig22319.5937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at H-paniculata_contig22319:2373..3777+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |