mRNA_H-paniculata_contig22307.5935.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: A0A6H5KMW9_9PHAE (Vacuolar protein sorting-associated protein 35 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMW9_9PHAE) HSP 1 Score: 426 bits (1094), Expect = 5.610e-141 Identity = 208/227 (91.63%), Postives = 220/227 (96.92%), Query Frame = 1
Query: 1 QDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGEGGTVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDTLPRDMDAFRMLNDCVTRLVAERPKLELSEIILMQVCM 681
+DILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPD GSPYEG+GG+VDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYK DILP +LEQVVGCKDTIAQSYLMDCLIQVFPDEFHLA+L FL+GVCRLKEKVRVRP+LESLMERIGNYVEEHPD LP+D+DAFR+LNDCVTRLV+ERPKLELSEIILMQV +
Sbjct: 123 RDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDAGSPYEGDGGSVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKTDILPPVLEQVVGCKDTIAQSYLMDCLIQVFPDEFHLASLEAFLDGVCRLKEKVRVRPVLESLMERIGNYVEEHPDALPKDVDAFRLLNDCVTRLVSERPKLELSEIILMQVAL 349
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: A0A7S2HPW3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPW3_9STRA) HSP 1 Score: 264 bits (674), Expect = 3.590e-86 Identity = 132/213 (61.97%), Postives = 166/213 (77.93%), Query Frame = 1
Query: 40 VQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGE-GGTVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDT-LPRDMDAFRMLNDCVTRLVAERPKLELSEIILMQ 672
VQHPMRGLFLRNY +H+ RDKLPDVGS Y + GG V DS++F+++NF E N+LWVRM Q GP KDKKRRE+ER+DLR+LVGTNLVRLSQLEGVD YK LP ILEQV CKD+IAQSYLMDC+I VFPD+FHLA L FL+ +LKEKV VR ILES+M+R+ Y + + +P D++AF++ N CVT+L+ ER L+L+EI+ ++
Sbjct: 1 VQHPMRGLFLRNYLAHIARDKLPDVGSEYSIDAGGDVQDSLDFIIQNFSETNRLWVRMQNQ-GPVKDKKRREKERQDLRILVGTNLVRLSQLEGVDVHLYKETALPRILEQVANCKDSIAQSYLMDCIIHVFPDDFHLATLDAFLQTCTQLKEKVNVRGILESMMDRLSGYADGNKGVVIPDDIEAFQIFNQCVTKLLNERTNLDLAEILRLE 212
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: W7TDU3_9STRA (Vacuolar protein sorting-associated protein 35 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDU3_9STRA) HSP 1 Score: 282 bits (721), Expect = 4.340e-86 Identity = 139/227 (61.23%), Postives = 177/227 (77.97%), Query Frame = 1
Query: 1 QDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGE-GGTVDDSVEFVLENFVEANKLWVRMHGQ--KGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDTLPRDMDAFRMLNDCVTRLVAERPKLELSEIILMQ 672
+DILKDL+EM+KGVQHPMRGLFLRNY S V+RDKLPDVG+PYEGE GG+V D+ EF+L+NF EAN+LW RM Q +KDKKRRE+ER++LR+LVGTNLVRLSQL+GV+ A YK ILP +LEQVV CKDT+AQSYLM+C++QVF DEFH+A L FL +LKEKV VR ILE +M+R+ + E +P +P + F M N CV++L+ ERP + E++ +Q
Sbjct: 122 RDILKDLVEMSKGVQHPMRGLFLRNYLSQVSRDKLPDVGTPYEGEEGGSVQDAYEFILQNFSEANRLWCRMQQQPTNAHNKDKKRREKERQELRILVGTNLVRLSQLQGVEAATYKEHILPRLLEQVVQCKDTLAQSYLMECIVQVFGDEFHIATLDLFLAACTQLKEKVNVRAILEGVMDRLATFAEANPAAIPPHLRTFDMFNTCVSKLLEERPGYSVVEVLRLQ 348
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: A0A7S2XXV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXV8_9STRA) HSP 1 Score: 266 bits (681), Expect = 5.740e-84 Identity = 139/228 (60.96%), Postives = 170/228 (74.56%), Query Frame = 1
Query: 7 ILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGE------GGTVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDTLPRDMDAFRMLNDCVTRLVAERPKLELSEIILMQ 672
+L DLLEMTKGVQHPM GLFLR+Y +H TRDKLPDVGS Y G V D+ EFVL+NF EAN+LWVR+ Q G SKD+KRRERER+ LR+LVGTNLVRLSQLEG+D Y + ILP ILEQV GC+D++AQ+YLMDC+IQVFPDEFHL L PFL+ + +LKEKV VR ILESLMER+ N+ E P+ P + + + VT L+ RP++ +SE IL+Q
Sbjct: 129 VLADLLEMTKGVQHPMWGLFLRHYLAHQTRDKLPDVGSEYADPEDPACGGSGVADAYEFVLQNFQEANRLWVRLQHQ-GASKDRKRRERERQALRILVGTNLVRLSQLEGIDQDTYAQVILPRILEQVSGCRDSLAQTYLMDCIIQVFPDEFHLTTLRPFLDTLTQLKEKVNVRTILESLMERLINFAENSPEDKPPGTEVYELFVVSVTSLLTNRPQMTMSEKILLQ 355
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: A0A7S3H9X6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9X6_9STRA) HSP 1 Score: 270 bits (690), Expect = 7.100e-83 Identity = 131/226 (57.96%), Postives = 177/226 (78.32%), Query Frame = 1
Query: 1 QDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGEGGTVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDT--LPRDMDAFRMLNDCVTRLVAERPKLELSEIILMQ 672
+DILKDL+E+ KGVQHPMRGLFLRNY + V++ KLPDVGSPYEG GG++ D+ F+L+NF+E N+LWVR+ G +KDKK+RE+ER DLR+LVGTNLVRLSQLEG+D + YK ++LP ILE+V+ CKDTIAQSYLMDC+IQVFPD+FHL L L+ V LKEKV VR ILE+LM+R+ + + T + ++++F++ NDC+T L+ +R + L+E + +Q
Sbjct: 124 KDILKDLIEVIKGVQHPMRGLFLRNYLTLVSKGKLPDVGSPYEGVGGSIQDAYSFLLQNFIETNRLWVRLQTA-GVNKDKKKREKERMDLRILVGTNLVRLSQLEGLDVSDYKSNVLPKILEEVLSCKDTIAQSYLMDCIIQVFPDDFHLNTLELLLQTVSSLKEKVNVRAILEALMDRLAAHAANNAATGAVGAEINSFKLFNDCITTLIEDRASMSLTETLRLQ 348
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: A0A835Z7F2_9STRA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F2_9STRA) HSP 1 Score: 273 bits (699), Expect = 8.100e-82 Identity = 147/281 (52.31%), Postives = 175/281 (62.28%), Query Frame = 1
Query: 7 ILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGEGGT-----------------------------------------------------------VDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDTLPRDMDAFRMLNDCVTRLVAERPKLELSEIILMQ 672
+L DLLEM KGVQ PMRGLFLR Y S VT+DKLPD G+PYEGEGG+ V D +EFVLENF E+N+LWVRMH Q KDK+RRERER+DLR+LVGTNL RLS+LEGVD YK +LP +L+QVV C+DTIAQSYLMDC++Q FPDEFH+ AL FLE + +LKEKVRVR ILESLM+R+ Y E LP D F LNDCV RL+ ERP ++L+EI+L+Q
Sbjct: 137 VLSDLLEMAKGVQQPMRGLFLRFYLSQVTKDKLPDTGTPYEGEGGSASATAAPAQLTARASCASVRSAATVELEQFKGAPANRVNAQLIARPARIRLRNGLSARSVSDCLEFVLENFAESNRLWVRMHAQ-AAVKDKRRRERERRDLRVLVGTNLERLSELEGVDAEMYKTAVLPRVLDQVVTCRDTIAQSYLMDCIVQGFPDEFHIHALPVFLESLLKLKEKVRVRLILESLMQRLSKYAETDGSALPGDASTFTQLNDCVARLIQERPSMDLAEIVLLQ 416
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: A0A812U7I6_SYMMI (VPS35B protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U7I6_SYMMI) HSP 1 Score: 259 bits (661), Expect = 6.390e-80 Identity = 126/204 (61.76%), Postives = 158/204 (77.45%), Query Frame = 1
Query: 61 LFLRNYFSHVTRDKLPDVGSPYEGEGGTVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDTLPRDMDAFRMLNDCVTRLVAERPKLELSEIILMQ 672
LFLRNY SH T+ +LPDVGSP+EG GG+V D+ +FVL NF E+N+LWVR+ Q G SKD+K+RE+ER+DLR+LVGTNLVRLSQLEG+D +YK +LP ILEQVV CKDTIAQSYLMDC IQVFPDEFHLA L PFL+ LK+KV VR ILES+M+R+ Y + +P ++ AF+M NDC+T L+ R L L+E + +Q
Sbjct: 1 LFLRNYLSHCTKSRLPDVGSPFEGVGGSVQDATDFVLTNFTESNRLWVRLQNQ-GASKDRKKREKERQDLRILVGTNLVRLSQLEGLDLHEYKSSVLPRILEQVVLCKDTIAQSYLMDCTIQVFPDEFHLATLEPFLQTCTNLKDKVNVRAILESMMDRLAYYAASNSGQIPAEVKAFKMFNDCITTLIENRTNLTLTETLRLQ 203
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: L8H265_ACACA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H265_ACACA) HSP 1 Score: 261 bits (668), Expect = 7.300e-79 Identity = 122/225 (54.22%), Postives = 167/225 (74.22%), Query Frame = 1
Query: 1 QDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGEGGTVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDTLPRDMDAFRMLNDCVTRLVAERPKLELSEIILMQV 675
+D+L+DL+EM +GVQHP RGLFLR Y S +T+DKLPDVGS YEG GG V+DS+ F+L+NF E NKLWVRM Q GP +DK RRE+ER++LRLLVG NL RLSQL+GVD A YK +LP I EQVV C+D IAQ YLM+ LIQ+FPD FHL L PFL+ +L+ V V+ I+ S+++R+ N+ + P PR++D F++ + +T ++ +RPK+ +++ + V
Sbjct: 155 KDVLRDLVEMCRGVQHPTRGLFLRTYLSEMTKDKLPDVGSDYEGAGGDVNDSISFILQNFTEMNKLWVRMQHQ-GPVRDKARREQERRELRLLVGKNLARLSQLDGVDVAIYKEAVLPRITEQVVNCRDQIAQQYLMEILIQIFPDHFHLQTLEPFLDTCAKLQPTVDVKSIVVSMLDRLANFAAQEPTNFPREIDVFKIFSSAITNIIEQRPKMTAEDMLALYV 378
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: G5DWG7_SILLA (Vacuolar sorting protein (Fragment) n=2 Tax=Silene latifolia TaxID=37657 RepID=G5DWG7_SILLA) HSP 1 Score: 245 bits (625), Expect = 7.410e-76 Identity = 120/225 (53.33%), Postives = 162/225 (72.00%), Query Frame = 1
Query: 1 QDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGEGGTVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDTLPR--DMDAFRMLNDCVTRLVAERPKLELSEIILM 669
+DILKDL+EM +G+QHP+RGLFLR+Y S V+RDKLPD+GS YEG+ TV D+VEFV++NF E NKLWVRM Q GP+++K RRE+ER +LR LVG NL LSQ+EGVD YK +LP +LEQVV CKD +AQ YLMDC++QVFPDE+HL L L +L+ V ++ +L SLMER+ NY P+ LP +DAF LN + +++ +P + + ++ +
Sbjct: 124 KDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVTDAVEFVIQNFTEMNKLWVRMRHQ-GPAREKDRREKERSELRDLVGKNLHVLSQIEGVDLDMYKDTVLPRVLEQVVNCKDDLAQYYLMDCMVQVFPDEYHLQTLDILLGACPQLQPTVDIKSVLSSLMERLSNYAATSPEVLPEFLHVDAFSRLNSVIGKVIEAQPDMPVVAVVTL 347
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Match: A0A176W3K4_MARPO (Vacuolar protein sorting-associated protein 35 n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176W3K4_MARPO) HSP 1 Score: 249 bits (637), Expect = 1.140e-74 Identity = 123/229 (53.71%), Postives = 167/229 (72.93%), Query Frame = 1
Query: 1 QDILKDLLEMTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGEGGTVDDSVEFVLENFVEANKLWVRMHGQKGPSKDKKRRERERKDLRLLVGTNLVRLSQLEGVDGAKYKRDILPVILEQVVGCKDTIAQSYLMDCLIQVFPDEFHLAALGPFLEGVCRLKEKVRVRPILESLMERIGNYVEEHPDTLPR--DMDAFRMLNDCVTRLVAERPKLELSEIILMQVCM 681
+D+LKDL+EM++GVQHP+RGLFLR+Y S ++RDKLPDVGS YEGEGG V D+VEFVL+NF E NKLWVRM Q GP+++K++RE+ER +LR LVG NL LSQLEGVD YK +LP +LEQVV CKD +AQ YLMDC+IQVFPD+FHL L L +L+ V ++ ++ LMER+ NY P+ LP ++AF L++ V +++ +P++ L + + V +
Sbjct: 84 KDVLKDLVEMSRGVQHPIRGLFLRSYLSQISRDKLPDVGSEYEGEGGNVMDAVEFVLQNFTEMNKLWVRMQHQ-GPAREKEKREKERSELRDLVGKNLHVLSQLEGVDLEMYKEVVLPRVLEQVVNCKDDLAQYYLMDCIIQVFPDDFHLQTLETLLGACPQLQPNVDIKTVMSQLMERLSNYAASSPEVLPEFLQVEAFTKLSNSVVKVIEAQPEMSLVGAVSLHVAL 311 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22307.5935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22307.5935.1 >prot_H-paniculata_contig22307.5935.1 ID=prot_H-paniculata_contig22307.5935.1|Name=mRNA_H-paniculata_contig22307.5935.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp MTKGVQHPMRGLFLRNYFSHVTRDKLPDVGSPYEGEGGTVDDSVEFVLENback to top mRNA from alignment at H-paniculata_contig22307:648..3663- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22307.5935.1 ID=mRNA_H-paniculata_contig22307.5935.1|Name=mRNA_H-paniculata_contig22307.5935.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3016bp|location=Sequence derived from alignment at H-paniculata_contig22307:648..3663- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22307:648..3663- >mRNA_H-paniculata_contig22307.5935.1 ID=mRNA_H-paniculata_contig22307.5935.1|Name=mRNA_H-paniculata_contig22307.5935.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig22307:648..3663- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |