mRNA_H-paniculata_contig22274.5921.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: D7FWC7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC7_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 5.290e-21 Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 1
Query: 1 FQIQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
F+IQRAGPDTDHLPT+H CFN LVLP+YS EKL RLLKRAI ECEGFGL+
Sbjct: 1159 FKIQRAGPDTDHLPTAHTCFNTLVLPEYSGEEKLTRLLKRAIAECEGFGLR 1209
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: A0A6H5K2Y9_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y9_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 3.430e-20 Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 1
Query: 7 IQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
IQRAGPDTDHLPT+H CFN L+LP+YS EKL RLLKRA+TECEGFGL+
Sbjct: 1674 IQRAGPDTDHLPTAHTCFNTLMLPEYSGEEKLTRLLKRAVTECEGFGLR 1722
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: A0A7S2GRV6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRV6_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.140e-16 Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 1 FQIQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
F+IQRAGPD+ LPTSH CFN L+LP+Y S +KL L RAI ECEGFGL+
Sbjct: 51 FKIQRAGPDSMQLPTSHTCFNTLLLPEYDSYDKLVDRLSRAILECEGFGLQ 101
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: W7TN24_9STRA (Ubiquitin protein ligase e3a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN24_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.390e-16 Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 7 IQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
IQRAGPD+DHLPT+H CFN L+LP+Y S EKL+ L +AI+EC GFGL+
Sbjct: 1386 IQRAGPDSDHLPTAHTCFNTLLLPEYGSKEKLKERLMKAISECRGFGLQ 1434
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: U6GKA1_EIMAC (HECT domain-containing protein n=1 Tax=Eimeria acervulina TaxID=5801 RepID=U6GKA1_EIMAC) HSP 1 Score: 71.6 bits (174), Expect = 2.280e-15 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 7 IQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
+ R G DTD LPTSH CFN L+LPDYSS EK++RLL AI C GFGL+
Sbjct: 20 VGRHGLDTDRLPTSHTCFNFLLLPDYSSQEKMQRLLLIAIQNCRGFGLR 68
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: A0A7S4QMC4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QMC4_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.390e-15 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 1 FQIQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
F+IQRAGPD+ HLPTSH CFN L+LPDY S +KL + A+ ECEGFGL+
Sbjct: 392 FKIQRAGPDSMHLPTSHTCFNTLLLPDYDSYDKLVDRVSHAVVECEGFGLQ 442
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: F0XWH0_AURAN (HECT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWH0_AURAN) HSP 1 Score: 76.6 bits (187), Expect = 3.990e-15 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 1 FQIQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
F+IQRAGPD+ +LPTSH CFN L+LPDY +K+ LL AI ECEGFGL+
Sbjct: 341 FRIQRAGPDSSNLPTSHTCFNTLLLPDYDPPDKVAHLLNIAIRECEGFGLQ 391
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: A0A482UR49_9ARCH (HECT domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UR49_9ARCH) HSP 1 Score: 72.4 bits (176), Expect = 6.130e-15 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 1 FQIQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
F IQRAGPDT+ LPT+ VCF+VL+LP+Y+S KL L +AI EC GFGLK
Sbjct: 85 FTIQRAGPDTNKLPTASVCFHVLLLPEYASEAKLRDRLTKAIEECTGFGLK 135
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: A0A7S0SGJ8_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGJ8_9CHLO) HSP 1 Score: 76.3 bits (186), Expect = 6.510e-15 Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 1 FQIQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
F +QR+GPDT HLPTSH CFNVL+LP+YSS EKL L AI EGFGL+
Sbjct: 505 FVVQRSGPDTSHLPTSHTCFNVLLLPEYSSREKLRERLLVAIANAEGFGLQ 555
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Match: A0A7S2R9E4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9E4_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 6.540e-15 Identity = 29/51 (56.86%), Postives = 42/51 (82.35%), Query Frame = 1
Query: 1 FQIQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLK 153
F++ R GPD++ LPTSH CFN +++P+YSS KL +L++ A++ECEGFGLK
Sbjct: 879 FKVHRMGPDSEQLPTSHTCFNTMLIPEYSSQAKLNKLVRLAVSECEGFGLK 929 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22274.5921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22274.5921.1 >prot_H-paniculata_contig22274.5921.1 ID=prot_H-paniculata_contig22274.5921.1|Name=mRNA_H-paniculata_contig22274.5921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp FQIQRAGPDTDHLPTSHVCFNVLVLPDYSSAEKLERLLKRAITECEGFGLback to top mRNA from alignment at H-paniculata_contig22274:1065..1220+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22274.5921.1 ID=mRNA_H-paniculata_contig22274.5921.1|Name=mRNA_H-paniculata_contig22274.5921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=156bp|location=Sequence derived from alignment at H-paniculata_contig22274:1065..1220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22274:1065..1220+ >mRNA_H-paniculata_contig22274.5921.1 ID=mRNA_H-paniculata_contig22274.5921.1|Name=mRNA_H-paniculata_contig22274.5921.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=312bp|location=Sequence derived from alignment at H-paniculata_contig22274:1065..1220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |