mRNA_H-paniculata_contig2226.5917.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.040e-80 Identity = 161/432 (37.27%), Postives = 237/432 (54.86%), Query Frame = 1
Query: 1 AGKWRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPFVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETGLPVAVYVDDLVIA-GRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRV----GRHTSEPTSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPDLGIAFGGKSNGHGLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFE 1281
A KW+ A E E+ +L +N TWE LP GRKAI +K +FK + +G + RYK L+A+GFLQ DF ET A V + + +R AA+ L MD+ A+LN +EEE+++K P F ++ V +L ++LYGLKQS R WN T+D+ + IG + T+ C+Y RDD+ + V +YVDDL++A + + K +S+RF M DLG L LG+EV RD +G +++ Q ++ VL ++G +C+ V + T+ G + S +G + +RPD A AV ++ DPC + KR+ RY P GI F G +G L G+ DADWA D E ++ST+GY+F LNGG S+KQR V SSTE EY+A +A +E + + +R +G E
Sbjct: 6 ASKWKEACESEFESLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAM--IFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLKAFMRELGEE 430
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 261 bits (667), Expect = 7.650e-73 Identity = 166/440 (37.73%), Postives = 236/440 (53.64%), Query Frame = 1
Query: 1 AGKWRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPF-VRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETGLPVAVYVDDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRVGRHTSEPTSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPDLGIAFGGKSNGHGLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFECRVSMALFEDN 1314
A W+ +M E+ AL+ N TW D LPAG K I +K +F+ + +G + R+K L+A+G Q +++ET + V R +R F AAE + +DI AYLN+ ++EE++++ P F S + P V +L K++YGLKQS R WNNTLD+ L +G RS+ +CLY + +G + + AVYVDDL+I E ++ K IS +F M D GSLS LG+E++RD G +++ Q +YIR +LK YG CR V F + + S IG + + SRPD +AV + ++ +P + K I RY S +L I + + G + GF DADWA D D+KS +GY F L G A S KQ +V SSTE EYVA A KE Y R LL IG+ M + DN
Sbjct: 830 AQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSSYI--AVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAV-ATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIVALSSTEAEYVALTAAAKEAVYLRRLLAEIGWSAGEPMVINGDN 1259
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: A0A5S6QN85_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QN85_TRIMR) HSP 1 Score: 256 bits (654), Expect = 1.290e-72 Identity = 159/438 (36.30%), Postives = 245/438 (55.94%), Query Frame = 1
Query: 7 KWRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPFVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETGLPVAVYVDDLVIAGRREKVD-EFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRVGRHTSEPTSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPDLGIAFGGKSNGH-GLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFECRVSMALFEDN 1314
KW A+ E +L ++ WE D LP G++ I K +FK + G++ YK L+A+GF Q++ D+ ET A V R +R F AA + + +D+ AYLN ++EELF++ PP FS + D V RL +SLYGLKQS+R WN DAL +G +R + CL FSR+++ T V +YVDDL+IAG ++ + ++ F +KDLG + + LG++V R+ +G+ + Q + +R +LK +G + + V ++ NF + + + IG + ++ +RPD ++AV Q R ME P ++D+ KR+ RY + +P + F +NG L GF+DADWA D D+KST+GY FK+ SRKQ V SSTE EYVAA +A ++ + R +L IG + ++EDN
Sbjct: 371 KWMEAVNAELMSLEKHKVWEIAD---LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDETFAPVVRHETVRILFAVAAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTDGK-VLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRNEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREE-DGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEA-NFLSSTEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDHADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYVAASEACRDLLWIRQVLEDIGIKQVEPTIVYEDN 799
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU) HSP 1 Score: 260 bits (664), Expect = 2.550e-72 Identity = 160/437 (36.61%), Postives = 238/437 (54.46%), Query Frame = 1
Query: 1 AGKWRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPFVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETG--LPVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRVGRHTSEPTSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPDLGIAF---GGKSNGHGLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFECRVS 1293
A W+AA EE A + E D P GRK + K +FK + DGS+ +YK L+A+GF QVE D+ +T A V + + +RT AA D +++ MD+ +A+LN ++EE+++ PP F D V RL KSLYGLKQ+SR W + +G +RS + ++ + E G L +A+YVDD++IAG R +D FK +S+RF M DLGS +LG+E+ RDR T++ISQ YI ++L+R+G CR V + ++ T +P + + L + + SRPD A+AV ++ P + + R+FRY + DL +++ SNG G+ DADWA D D++ST+G F L+GGA S+KQ+ + SSTE EYVA A KE + R LL + +S
Sbjct: 1001 ADMWKAACAEELFAFAKA---ELYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFD---HDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFV----KVENGVILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKPYQSALGSL---MYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLRALLDDLAIPASIS 1424
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 248 bits (632), Expect = 3.450e-72 Identity = 155/449 (34.52%), Postives = 240/449 (53.45%), Query Frame = 1
Query: 1 AGKWRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIP-FVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFS--RDDRGETGLPV-AVYVDDLV-IAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRVGRHTSEPTSFWTVL--SGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPDLGIAF----GGKSNGHGLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFECRVSMALFEDN 1314
A KW+ A++EE+ +L+ N TWE P P G I +K + K + DG+V R+K L+AQG+ Q ++ E + V R S +RT A +++ E+ MD+ A+LN +E ++++ P F ++ P +V +L KSLYGLKQS+R WN TLD L G +S ++C+Y ++D G + AVYVDD++ I+ ++ K + + F M D G + +LG+ ++RDR T+ ISQ Y+ VL R+G C+ + S T + T E F L IG S+ +RPD + AV + M +P ++ + KR+ RY + G+ F NG L G+ DA+WA D + ++ST+GY+FK+ CS+KQ VT S+TE EYVA +A +E + R LL IG + ++EDN
Sbjct: 26 ASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGF--VDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPI-----STPLETTYHKRTEEEEGFDKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDN 464
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: A0A0J7K6W1_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K6W1_LASNI) HSP 1 Score: 259 bits (661), Expect = 4.790e-72 Identity = 161/438 (36.76%), Postives = 240/438 (54.79%), Query Frame = 1
Query: 10 WRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPFVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETGLPVAVYVDDLVIAGRREKVDE-FKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRVGRHTSEPTSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPD--LGIAFGGKSNGHGLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFECRVSMALFEDN 1314
W A EEE +L E+ TWE D LP G+KAI K +FK +L +G V YK L+A+GF Q ED+ ET A V + +R AA + +D+ +AYLN +EEE+F++ PP F + +R L KSLYGLKQS+R WN ++AL +G + CLY +R ++G V +YVDDL++AG +V + ++ + F +KDLG+++ LGI++ R+ +G+ +SQ I ++L+ YG E + + ++ + P + IG + ++ SRPD A AV R +E+P +D+ KR+ RY ++ D L ++ GK+ LE F+DADWA D D+KST+GY+F+L G SRKQ V SSTE EY+AA A KE + R LL+ + + EDN
Sbjct: 823 WITAAEEEIKSLNEHQTWELTD---LPPGKKAITCKWVFKAKLDSEGQVHTYKARLVARGFSQRYGEDYDETFAPVVKHETIRILLLVAAHKGLHVRHLDVKSAYLNGKLEEEIFLEQPPGFQKRGHESKVLRLL-KSLYGLKQSARAWNKRANEALAQLGFQSKNADQCLY-TRKEKGNNTTYVLLYVDDLLVAGTSAEVTQKVSKDLQRHFNIKDLGNVNHYLGIQIERE-ADGSFLLSQKGKISKMLEEYGLLEPKPMATPMETGFLSSEADDSIKLPNNS-QYRKAIGSLLYIATVSRPDIALAVGILCRCVENPTERDWKAVKRVMRYLASTIDKKLQLSSFGKTE---LECFVDADWAGDKTDRKSTSGYVFRLGNGTVAWSSRKQTTVAMSSTEAEYIAASYASKELLWLRQLLKDMNIPAEGPTIINEDN 1250
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: Q6BCY1_IPOBA (Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q6BCY1_IPOBA) HSP 1 Score: 257 bits (657), Expect = 1.560e-71 Identity = 152/428 (35.51%), Postives = 237/428 (55.37%), Query Frame = 1
Query: 7 KWRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPFVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETGLPVAVYVDDLVIAG-RREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGV----PCREKSENFGTRVGRHTSEPTSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPDLGIAFGGKSNGHGLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIG 1275
+W AAM+EE AL +N TW D LP GRK I K +FK + GD V RY+ L+ +G+ Q E DF E + V R++ +R A + LE +D+ A+L+ +EEE+++ L PE + V RL KSLYGLKQ+ R W D + +G +R + C YF R + + + + +YVDD+++AG ++ +DE K +++ F MKDLG +++LG+++ RDR N I +SQ +Y++++L R+ +C+ + P K + + S S +G + +RPD A AV +R M +P R+ + KRI RY D+ + +GG + G++D+D+A D + KSTTGY+FK+ GGA S+ Q +V S+TE EYVAA +A KE + + LL +G
Sbjct: 795 QWTAAMQEEIEALHKNNTW---DLVPLPQGRKPIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDLEEEIYM-LQPEGFEDKENQNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRFGK-DNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSD--FIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELG 1215
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: A0A5S6QJX2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QJX2_TRIMR) HSP 1 Score: 244 bits (624), Expect = 1.610e-71 Identity = 152/427 (35.60%), Postives = 236/427 (55.27%), Query Frame = 1
Query: 40 ALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPFVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETGLPVAVYVDDLVIAGRREKVD-EFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRVGRHTSEPTSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPDLGIAFGGKSNGH-GLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFECRVSMALFEDN 1314
+L + WE D LP G++ I K +FK + G++ YK L+A+GF Q++ D+ +T A V R +R F A + + +D+ AYLN ++EELF++ PP FS + V RL +SLYGLKQS+R WN DAL +G +R + CL FSR ++ T V +YVDDL+IAG ++ + ++ F +KDLG + + LG++V R+ +G+ + Q + +R +LK +G + + V ++ NF + + + IG + ++ +RPD ++AV Q R ME P ++D+ KR+ RY + +P + F +NG L GF+DADWA D D+KST+GY FK+ SRKQ V SSTE EY+AA +A ++ + R +L IG E ++EDN
Sbjct: 2 SLERHKVWEIAD---LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDKTFAPVVRHETVRILFAVVAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTGGK-VLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRSEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREE-DGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEA-NFLSSTEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDQADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYIAASEACRDLLWIRQVLEDIGIEQVEPTIVYEDN 419
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: A0A6S7HIB2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HIB2_PARCT) HSP 1 Score: 256 bits (653), Expect = 2.210e-71 Identity = 160/446 (35.87%), Postives = 243/446 (54.48%), Query Frame = 1
Query: 7 KWRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPFVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETGLPVAVYVDDLVIAGRREKV-DEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRVGRHTSEP---TSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGM-----EDPCRKDFGTCKRIFRYRSTAPDLGIAF-GGKSNGHGLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFECRVSMALFEDN 1314
KW+ A++ E+ A ++N TW G LP GRKAI + +FK + DGSV R+K L+A+G+ Q D+ ET + V + + +R+ A + D E+ MD+ A+LN +EEE+++K P + + V +L KS+YGLKQSSR W NT+D L G +S ++ CLY R+ G+ + +A+YVDDL+ A +++ + K + +RF MKDLG + LGI+V RDR + + Q Y+ + K++G +EC+ P + GT++ + EP T + ++ G+ V + +RPD A A+ G+ +P + + KRI RY D GI F G K G++DADW + +KS +GY+F L GG S+KQ +V SSTE EYVAA A +E + R LL I F + EDN
Sbjct: 605 KWKQALDNEYSAHIKNNTWTL---GNLPEGRKAIDCRWVFKVKYNADGSVERHKARLVAKGYSQEPGLDYDETFSPVAKYTSIRSLLAIANQLDLEVHQMDVSTAFLNGELEEEIYMKQPEGYVKEGEE-DLVCKLNKSIYGLKQSSRCWYNTIDQFLKNSGYVQSSSDPCLYIKRE--GDDIMLIALYVDDLIPASNSKRMLHKEKEALRKRFEMKDLGEVHYCLGIQVERDRNKKRMRLHQSQYLTNLSKKFGMEECK--PAATPVDQ-GTKLLPNEGEPVEKTKYQALIGGLTYAV---TGTRPDLAQALGLVTLGLVNQFCSNPGVEHWTAAKRILRYIKGTIDYGITFDGNKETEVQWNGYVDADWGSNPNGRKSQSGYLFTLCGGVISWASKKQSVVALSSTEAEYVAASLACQEAVWLRVLLEDISFVQNKPTMIKEDN 1038
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Match: A0A6G0HFF8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HFF8_LARCR) HSP 1 Score: 244 bits (622), Expect = 5.370e-71 Identity = 154/439 (35.08%), Postives = 240/439 (54.67%), Query Frame = 1
Query: 1 AGKWRAAMEEEWGALVENGTWESEDPGRLPAGRKAIRTK*IFKQRLKGDGSVARYKVPLMAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLNAPVEEELFIKLPPEFSPFSRDIPFVRRLGKSLYGLKQSSRNWNNTLDDALGGIGLDRSRTNSCLYFSRDDRGETGLPVAVYVDDLV-IAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPCREKSENFGTRVGRHTSEPTSFWTVLSGIGEGVQESSRSRPDTAYAVHQAARGMEDPCRKDFGTCKRIFRYRSTAPDLGIAFGGKSNGHGLEGFIDADWAEDFEDQKSTTGYIFKLNGGAKRGCSRKQRLVTWSSTEEEYVAAGKAGKETAYPRGLLRSIGFECRVSMALFEDN 1314
A +W+ A + E+ +L+EN TW+ + LP RK I ++ +FK + DG V RYK L+A+G+ Q D+ ET + V R S +RT A +N+ + MD+ A+LN +EEE++++ P + ++ V +L KS+YGLKQS R W+ T +++ IG ++S ++ C++ E +AVYVDDL+ I E + E K + ++++MKD+G LS +LGI V +D+ N ++ + Q YI VL++YG D+ V + N + S P + T S +G + + +RPD A AV ++ P KRI RY +L + + +S L GF DADWA D +D++STTG IF L GGA S+KQ V S+ E EYVA +A +E + LL +G + ++ L EDN
Sbjct: 10 AKEWKEAADLEYESLLENETWDLVE---LPKDRKPIGSRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQPDGYIKPGQE-HLVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFVRARQELEI---LAVYVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDKANPVTTPADA-NVKLQKDDGVSNPVNPGTYQSIVGSLLYAAMATRPDIAQAVSAVSKFNAKPNTAHMTAVKRILRYLKGTINLALKYQ-RSESETLLGFSDADWAGDQDDRRSTTGNIFLLGGGAVSWLSKKQNTVALSTAEAEYVALSQAAQECTWLTRLLSDLGMDATPTVIL-EDN 438 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2226.5917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2226.5917.1 >prot_H-paniculata_contig2226.5917.1 ID=prot_H-paniculata_contig2226.5917.1|Name=mRNA_H-paniculata_contig2226.5917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=416bp MAQGFLQVEVEDFFETSALVPRMSKLRTAFRPAAENDFELEGMDIDAAYLback to top mRNA from alignment at H-paniculata_contig2226:5..1584+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2226.5917.1 ID=mRNA_H-paniculata_contig2226.5917.1|Name=mRNA_H-paniculata_contig2226.5917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1580bp|location=Sequence derived from alignment at H-paniculata_contig2226:5..1584+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2226:5..1584+ >mRNA_H-paniculata_contig2226.5917.1 ID=mRNA_H-paniculata_contig2226.5917.1|Name=mRNA_H-paniculata_contig2226.5917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2496bp|location=Sequence derived from alignment at H-paniculata_contig2226:5..1584+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |