mRNA_H-paniculata_contig22255.5915.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: D8LDQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ3_ECTSI) HSP 1 Score: 162 bits (411), Expect = 9.500e-45 Identity = 76/130 (58.46%), Postives = 88/130 (67.69%), Query Frame = 1
Query: 13 LQVIGTHNSYHRRTTVPAAERFWMYRYPSLTEQLDRGIRNLELDIHYDWKTGRLVWQYRCFSSPGHVARVDTRFHVQLLRTWFVYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIELKVYGD 402
LQVIGTHNSYHRRT VPA +W Y YPSLT QLD GIR+LELDIHYDWKTGR WFV+HLS+LDA+++CNC SVCL E+++WSD HP HHILF+ IELK+ GD
Sbjct: 209 LQVIGTHNSYHRRTYVPALSDYWDYHYPSLTAQLDAGIRHLELDIHYDWKTGR----------------------------WFVFHLSILDAVSSCNCLSVCLAEVREWSDTHPTHHILFIEIELKLTGD 310
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: A0A6H5L092_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L092_9PHAE) HSP 1 Score: 160 bits (404), Expect = 6.740e-44 Identity = 75/130 (57.69%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 13 LQVIGTHNSYHRRTTVPAAERFWMYRYPSLTEQLDRGIRNLELDIHYDWKTGRLVWQYRCFSSPGHVARVDTRFHVQLLRTWFVYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIELKVYGD 402
LQVIGTHNSYHRRT VPA +W Y+YPSLT QLD GIR+LELD HYDWKTGR WFV+HLS+LDA+++CNC SVCL EI++WSD HP HHILF+ IE K+ GD
Sbjct: 208 LQVIGTHNSYHRRTFVPALSDYWDYQYPSLTAQLDAGIRHLELDTHYDWKTGR----------------------------WFVFHLSILDAVSSCNCLSVCLAEIREWSDTHPTHHILFIEIEFKLTGD 309
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: A0A6H5KYL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYL9_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 6.580e-20 Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 1
Query: 13 LQVIGTHNSYHRRTTVPAAERFWMYRYPSLTEQLDRGIRNLELDIHYDWKTGR 171
L+V GTHNSYHRRT +P +FW Y +PS+ QLD G+R+LELD+HYDWKTGR
Sbjct: 85 LKVYGTHNSYHRRTNIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGR 137
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: A0A149S9D6_GLUJA (Uncharacterized protein (Fragment) n=2 Tax=Gluconobacter japonicus TaxID=376620 RepID=A0A149S9D6_GLUJA) HSP 1 Score: 86.7 bits (213), Expect = 2.970e-18 Identity = 54/141 (38.30%), Postives = 75/141 (53.19%), Query Frame = 1
Query: 13 LQVIGTHNSYHR------RT----TVPAAERFWMYRYPSLTEQLDRGIRNLELDIHYDWKTGRLVWQYRCFSSPGHVARVDTRFHVQLLRTWF-VYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIELKVYGD 402
LQVIG+HNSYH RT + P R Y++PSL+ QLD G+R LELDI+ D K GR +R PG V + + + + F V H+ +D TC CL +I+ WS HP H +FV +E++ + D
Sbjct: 26 LQVIGSHNSYHAGLDSTIRTQLLASAPDLVRQLDYQHPSLSAQLDGGVRQLELDIYADTKGGRFAHPHRP-GVPGDVWSLSSSDQAIMNQPGFKVMHIPDIDQHATCQPLQQCLSQIRDWSVAHPHHVPVFVILEVEQHND 165
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: UPI001663383E (Ca2+-dependent phosphoinositide-specific phospholipase C n=1 Tax=Asaia siamensis TaxID=110479 RepID=UPI001663383E) HSP 1 Score: 87.4 bits (215), Expect = 1.950e-17 Identity = 54/147 (36.73%), Postives = 70/147 (47.62%), Query Frame = 1
Query: 13 LQVIGTHNSYHRRTT----------VPAAERFWMYRYPSLTEQLDRGIRNLELDIHYDWKTGRLVWQYRCFSSPGHVARVDTRFHVQLLRTWF-------VYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIELKVYGD 402
+QVIG+HNSYH P YR+ SLT QLD GIR +ELD++ D + GR +R PGH D R+ + L V H+ LD TC F+ CL EI WS HP H +FV +E + + D
Sbjct: 56 IQVIGSHNSYHAGIAPARLALIAEDAPQLASLLDYRHASLTNQLDHGIRQIELDLYADTQGGRFATPHR----PGHA---DERWPLSLREEAVMRQPGIKVMHIPDLDQHATCQPFTACLAEISHWSRAHPGHVPIFVILETEQHND 195
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: A0A7D8FGH8_9BACT (Uncharacterized protein n=1 Tax=Granulicella sp. 5B5 TaxID=1617967 RepID=A0A7D8FGH8_9BACT) HSP 1 Score: 85.9 bits (211), Expect = 3.240e-17 Identity = 56/144 (38.89%), Postives = 72/144 (50.00%), Query Frame = 1
Query: 13 LQVIGTHNSYHRRTTVPAAERFWM-----------YRYPSLTEQLDRGIRNLELDIHYDWKTGRLVWQYRCFSSPGHVAR----VDTRFH---VQLLRTWFVYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIELK 390
+QVIGTHNSYH P+ + W Y +PSLT+QLD G+R +ELDI D K GR Y + P VA VD F V L + V H+ +D + C F CL EI+ WS HP H +F+ +E K
Sbjct: 12 IQVIGTHNSYHAGIA-PSESKIWKEKHPKEYEGLDYSHPSLTKQLDSGVRQVELDIFADTKGGR----YAQPAGPEMVAAAGLPVDAPFDPDGVMLKPGFKVMHVQDVDYRSNCQPFIACLSEIRVWSRAHPRHVPIFILVETK 150
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: UPI0004E1A321 (phosphatidylinositol-specific phospholipase C1-like protein n=1 Tax=Bryobacter aggregatus TaxID=360054 RepID=UPI0004E1A321) HSP 1 Score: 84.3 bits (207), Expect = 1.340e-16 Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 13 LQVIGTHNSYHR----------RTTVPAAERFWMYRYPSLTEQLDRGIRNLELDIHYDWKTGRLVWQYRCFSSPGHVARV-------DTRFHVQ-LLRTWF-VYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIELK 390
+Q+IG+HNSYH R P A YR+PSLT+QL+ G+R LELD++ D Q F++P +AR+ D F + L++ F V H+ +D + C F CLEE++ WS HP H +++ IE K
Sbjct: 41 IQIIGSHNSYHSGIEPSQMALIRKANPQAAAALDYRHPSLTQQLNSGVRQLELDVYADP-------QGAAFAAPAGLARIAKAGLPADPPFDAEPLMKPGFKVLHVKDVDYRSNCQPFIACLEEVRAWSKKHPRHLPIYILIENK 178
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: UPI001787A955 (phosphatidylinositol-specific phospholipase C1-like protein n=1 Tax=Dyella acidiphila TaxID=2775866 RepID=UPI001787A955) HSP 1 Score: 84.3 bits (207), Expect = 1.500e-16 Identity = 53/140 (37.86%), Postives = 70/140 (50.00%), Query Frame = 1
Query: 13 LQVIGTHNSYHR----------RTTVPAAERFWMYRYPSLTEQLDRGIRNLELDIHYDWKTGR-----LVWQYRCFSSPGHVARVDTRFHVQLLRTWF-VYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIE 384
LQ IG+HNSYH + T PA Y +PSL+ QLD G+R LELD++ D K GR +V Q R P D + R F V H+ +D + C F+ CL EI+ WS+ HP H LF+ +E
Sbjct: 53 LQYIGSHNSYHAGLAPGEATVWKRTDPATFAMIDYAHPSLSRQLDDGVRQLELDVYGDAKGGRYAHPAIVGQVRAAGLPPDPPFADPAV---MQRPGFKVMHIQDIDQRSNCQPFTACLAEIRTWSNAHPRHLPLFILVE 189
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: UPI00131D2B91 (phosphatidylinositol-specific phospholipase C1-like protein n=1 Tax=Granulicella sp. L60 TaxID=1641866 RepID=UPI00131D2B91) HSP 1 Score: 83.6 bits (205), Expect = 2.460e-16 Identity = 53/144 (36.81%), Postives = 73/144 (50.69%), Query Frame = 1
Query: 13 LQVIGTHNSYHRRTTVPAAERFWM-----------YRYPSLTEQLDRGIRNLELDIHYDWKTGRLVWQYRCFSSPGHVARV----DTRFHVQLLRT---WFVYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIELK 390
+QVIGTHNSYH P+ + W Y++ L +QLD G+R +ELD++ D K GR Y S P +VA D F L + V H+ +D +TC F CL++IKQWS HP H +F+ +E K
Sbjct: 30 IQVIGTHNSYHAGIA-PSETKLWQTNYAEAFKGLDYQHQPLPQQLDSGVRQIELDVYADAKGGR----YAHPSGPKNVAAAGLPADPDFDPNGLMNKPGFKVMHVQDVDYRSTCQPFIGCLDQIKQWSQAHPNHVPIFILVETK 168
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Match: A0A563U2A4_9SPHI (Uncharacterized protein n=2 Tax=unclassified Mucilaginibacter TaxID=2617802 RepID=A0A563U2A4_9SPHI) HSP 1 Score: 83.2 bits (204), Expect = 3.170e-16 Identity = 50/140 (35.71%), Postives = 76/140 (54.29%), Query Frame = 1
Query: 1 PIVALQVIGTHNSYHRRTT------VPAAERFWM----YRYPSLTEQLDRGIRNLELDIHYDWKTGRLVWQYRCFSSPGHVARVDTRFHVQLLRTWFVYHLSVLDAMTTCNCFSVCLEEIKQWSDMHPAHHILFVTIELK 390
PI LQ+IG+HNSY R + A+ M Y + SL+EQL G+RNLE+D++ D G+ +PG A DT + + V+H+ +D T C F++CL+E+K+WS+ HP H +F+T+ K
Sbjct: 26 PINHLQIIGSHNSYKRAIDPKLFKLLQKADSISMSKIDYEHISLSEQLGLGLRNLEIDVYADTAGGKYAHPKGLDMAPGQPA-YDTE-GLMNKPGFKVFHIQDIDYRTNCATFALCLQELKKWSEAHPNHSPVFITMNAK 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22255.5915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22255.5915.1 >prot_H-paniculata_contig22255.5915.1 ID=prot_H-paniculata_contig22255.5915.1|Name=mRNA_H-paniculata_contig22255.5915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp PIVALQVIGTHNSYHRRTTVPAAERFWMYRYPSLTEQLDRGIRNLELDIHback to top mRNA from alignment at H-paniculata_contig22255:296..1416+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22255.5915.1 ID=mRNA_H-paniculata_contig22255.5915.1|Name=mRNA_H-paniculata_contig22255.5915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1121bp|location=Sequence derived from alignment at H-paniculata_contig22255:296..1416+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22255:296..1416+ >mRNA_H-paniculata_contig22255.5915.1 ID=mRNA_H-paniculata_contig22255.5915.1|Name=mRNA_H-paniculata_contig22255.5915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig22255:296..1416+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |