mRNA_H-paniculata_contig22252.5914.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 136 bits (342), Expect = 5.820e-37 Identity = 71/144 (49.31%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 10 FVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGSTGFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 441
F D+D+ DV+ RK TTGYVF + GAI WCSR+QQ + S+TEAEYVAA E KE ++LR +L + L+ DN+SA+ L K H +TKHI VR+H I++ + G + ++YV++ DQLADILTK L VKF +LR
Sbjct: 104 FSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNKLR 247
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 142 bits (359), Expect = 1.600e-36 Identity = 69/142 (48.59%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 10 FVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGSTGFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQR 435
+VDADW DV DR+ +GY F L GGA+ W S+KQ SSTEAEY+AA KE +LR LG G C +T L DN+SAM +++ H +TKHI VR+H +R+ + G + L+YV TGDQ+AD+LTKGL + K +
Sbjct: 986 YVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A4Z0A7X3_9AGAM (Uncharacterized protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A7X3_9AGAM) HSP 1 Score: 133 bits (334), Expect = 5.660e-36 Identity = 68/142 (47.89%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 10 FVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGSTGFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQR 435
+VDADW DV DR +GY F L GGAI W S+KQ SSTEAEY+AA KE +L L G C +T L DN+SAM ++ H QTKHI VR+H +R+ + G + L+YV GDQ+AD+LTKGL + K +
Sbjct: 82 YVDADWAGDVNDRHSISGYTFLLAGGAISWSSKKQNMTALSSTEAEYIAAAHAAKEATWLCTFLSEIGRPCKAATLLLMDNQSAMAIAWNPVFHVQTKHIDVRYHFLREKVEAGAINLQYVPMGDQVADVLTKGLVKAKHDK 223
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: UPI001EE6E994 (secreted RxLR effector protein 161-like n=1 Tax=Neodiprion lecontei TaxID=441921 RepID=UPI001EE6E994) HSP 1 Score: 132 bits (332), Expect = 1.890e-35 Identity = 68/147 (46.26%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 1 LEEFVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGSTGFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 441
L ++ DAD+ ED E R+ TTGYVF+L GG I W S++Q+ VT S+TEAEYV A +E ++LR++L + C +T +F DN+SA+ L + H +TKHI +R+H IR+ + E IL ++YVQT Q DI TK R +F LR
Sbjct: 96 LVDYSDADYAEDAETRRSTTGYVFQLAGGPITWASQRQKLVTLSTTEAEYVVASVTSREAIWLRKLLLDIEYPCADATVIFVDNQSAIRLVRNPEFHKRTKHIDIRYHYIREKVVEKILKIEYVQTKQQKGDIFTKAQPRERFCMLR 242
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 132 bits (333), Expect = 2.770e-35 Identity = 77/154 (50.00%), Postives = 93/154 (60.39%), Query Frame = 1
Query: 10 FVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILG---STGFGCTGSTT----LFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLRNLL 450
+ DADW D DR+ T+ YVFKL GGAI WCSRKQQ + SSTEAEYVA KE ++L +L S F S + DN+SAM L+K S H +TKHI VR H IR + G L ++YV TGDQ+AD+LTK L R K NLL
Sbjct: 128 YSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTKSLAREKHTYFTNLL 281
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM) HSP 1 Score: 134 bits (336), Expect = 2.870e-35 Identity = 66/142 (46.48%), Postives = 88/142 (61.97%), Query Frame = 1
Query: 10 FVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGSTGFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQR 435
+VDADW DV DR+ +GY F L GGAI W S+KQ SSTEAEY+ A KE +LR L G C +T L DN+SAM ++ H +TKHI +R+H +R+ + G + L+YV TGDQ+AD+L KGL + K +
Sbjct: 180 YVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGLVKAKHNK 321
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A176WI96_MARPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WI96_MARPO) HSP 1 Score: 136 bits (342), Expect = 7.490e-35 Identity = 75/148 (50.68%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 1 LEEFVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGST-GFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 441
L+ F DADW D+ DRK TTGY+F L G I W SRKQ V SSTE+EY+A E KE V+LR +LG STT+ DN+ ++NL++ H +TKHI VR H IR+ I G + L YV T +QLADILTK L ++ F+RLR
Sbjct: 361 LQVFTDADWAADMHDRKSTTGYIFFLRGTPITWNSRKQPTVALSSTESEYMAVTEGAKEAVWLRRLLGKIHALDLQASTTIHGDNQGSLNLAQNPIYHGRTKHIEVRHHFIREKIASGEINLAYVSTNEQLADILTKPLGKIAFERLR 508
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: UPI001E1BA65C (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA65C) HSP 1 Score: 129 bits (323), Expect = 1.240e-34 Identity = 70/147 (47.62%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 1 LEEFVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGSTGFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 441
L+ F DAD+ D + RK TTGYVF LNG AI W +KQ+ S+TEAE+VA+ E GKE V++ L LF DN+SA+ + + H +TKHI VR+H IR+ +G++ KYV T +QLADILTK L +FQRLR
Sbjct: 51 LKAFSDADYAGDSDSRKSTTGYVFLLNGAAISWSGKKQKCTAQSTTEAEFVASSEAGKEAVWILRGLKELEGDVPTPMELFMDNQSAIRIIRNPELHQRTKHIDVRYHFIRELQEQGVIDAKYVNTNEQLADILTKPLAAPRFQRLR 197
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH) HSP 1 Score: 135 bits (341), Expect = 4.300e-34 Identity = 70/144 (48.61%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 10 FVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGSTGFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 441
FVD+D+ DV+DRK T+GYVF L GGAI W S+KQ VT S+TEAE+V+A + V+LR +L G G T +F DN S + LSK H ++KHI VR+H +R+ ++EG + L Y T DQ+ADI+TK ++R F+ LR
Sbjct: 1181 FVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELR 1324
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901) HSP 1 Score: 127 bits (319), Expect = 7.610e-34 Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 1
Query: 1 LEEFVDADWEEDVEDRKFTTGYVFKLNGGAIRWCSRKQQ*VTWSSTEAEYVAAGEVGKEIVYLREILGSTGFGCTGSTTLFEDNKSAMNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLRNLL 450
+E +VDAD+ ED+E R+ TTGYVF L GA+ W +++Q+ VT S+TEAEYVAA KE ++LR +L C +T +F DN+S + L + S H +TKHI VR H IR+ + G + K V T Q AD+ TK L R +F+ L L+
Sbjct: 59 IEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCVNTTKQKADLFTKALPRDRFKALCQLI 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22252.5914.1 >prot_H-paniculata_contig22252.5914.1 ID=prot_H-paniculata_contig22252.5914.1|Name=mRNA_H-paniculata_contig22252.5914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGback to top mRNA from alignment at H-paniculata_contig22252:2947..3402+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22252.5914.1 ID=mRNA_H-paniculata_contig22252.5914.1|Name=mRNA_H-paniculata_contig22252.5914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=456bp|location=Sequence derived from alignment at H-paniculata_contig22252:2947..3402+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22252:2947..3402+ >mRNA_H-paniculata_contig22252.5914.1 ID=mRNA_H-paniculata_contig22252.5914.1|Name=mRNA_H-paniculata_contig22252.5914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=390bp|location=Sequence derived from alignment at H-paniculata_contig22252:2947..3402+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |