prot_H-paniculata_contig2217.5878.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2217.5878.1
Unique Nameprot_H-paniculata_contig2217.5878.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length205
Homology
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: D7FTN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN6_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 3.060e-32
Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 0
Query:   58 TNIHDLIRARQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 177
            ++IH L+R RQ+ G  RF++R   G  S   L    G + + LR+L+LS  L+GH GCVNTVS +PDGKYWI+GSDD K+ IWDCESH+ K    S H +NVFQAR LPYTDNEK+  C  D
Sbjct:  141 SSIHTLLRERQRRGAGRFLTRE--GRRSVCPLHYAYGGNPNTLRRLELSGELRGHDGCVNTVSCSPDGKYWISGSDDLKLMIWDCESHKRKTSFHSRHQNNVFQARFLPYTDNEKIVSCAAD 260          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A6H5KJD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD8_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.070e-31
Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 0
Query:   58 TNIHDLIRARQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 177
            ++IH L+R RQ+ G  RF++R   G  S   L    G +   LR+L+LS  L+GH GCVNTVS +PDGKYWI+GSDD K+ IWDCESH+ K    S H +NVFQAR LPYTDNEK+  C  D
Sbjct:  139 SSIHTLLRERQRRGAGRFLTRE--GRRSVCPLHFAYGGNPITLRRLELSGELRGHEGCVNTVSCSPDGKYWISGSDDLKLMIWDCESHKRKTSFHSRHRNNVFQARFLPYTDNEKIVSCAAD 258          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A3M7KVX0_AUXPR (RING-type domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KVX0_AUXPR)

HSP 1 Score: 95.9 bits (237), Expect = 1.890e-19
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 0
Query:   82 GMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV 173
            G+ SP   +  VG   H L++L L+  L+GH GCVNTV+ TPDG+  ++GSDDQ +K+WD       +   SGHT NVFQARA+P TDN  V
Sbjct:   13 GLLSPSRFRSRVGASLHLLQRLGLTRRLEGHTGCVNTVTFTPDGEGLLSGSDDQLIKLWDWRRGAEVLSYDSGHTDNVFQARAIPGTDNRTV 104          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A1D1ZPA7_AUXPR (Uncharacterized protein (Fragment) n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZPA7_AUXPR)

HSP 1 Score: 95.9 bits (237), Expect = 2.120e-19
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 0
Query:   82 GMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV 173
            G+ SP   +  VG   H L++L L+  L+GH GCVNTV+ TPDG+  ++GSDDQ +K+WD       +   SGHT NVFQARA+P TDN  V
Sbjct:   33 GLLSPSRFRSRVGASLHLLQRLGLTRRLEGHTGCVNTVTFTPDGEGLLSGSDDQLIKLWDWRRGAEVLSYDSGHTDNVFQARAIPGTDNRTV 124          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: Q9FWE0_ORYSJ (Putative WD-repeat containing protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q9FWE0_ORYSJ)

HSP 1 Score: 78.6 bits (192), Expect = 3.330e-15
Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 0
Query:   67 RQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 177
            + +HG      R   G+  P    +        + +L++   L  H GCVNTV    DG   I+GSDDQ V +WD ++  +K+   SGH++NVFQAR +PYT+++ +  C  D
Sbjct:   10 KARHGAADLCLREV-GLLLPRRFARRAAASEDLVMRLQVHRKLNRHTGCVNTVGFNADGDTLISGSDDQMVMLWDWDTGAIKLQFPSGHSNNVFQARFMPYTNDQTIVTCAAD 121          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A7N0U6Q2_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U6Q2_KALFE)

HSP 1 Score: 82.0 bits (201), Expect = 1.150e-14
Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 0
Query:   82 GMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 177
            G  +P   ++T+G     + +L+L   L+ HRGCVNTVS   DG   ++GSDDQ+V +WD  +   K+   SGH  NVFQA+ +P+T++  V  C  D
Sbjct:   23 GAVTPRSFERTLGGSQDLVLRLQLFKKLEKHRGCVNTVSFNADGNILMSGSDDQRVILWDWMTGNAKLTFQSGHADNVFQAKFMPFTEDRSVVTCAAD 120          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A8B7CTM9_PHODC (DDB1- and CUL4-associated factor 8 isoform X1 n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7CTM9_PHODC)

HSP 1 Score: 81.3 bits (199), Expect = 2.250e-14
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 0
Query:   69 KHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 177
            +HG V    R    + +P      +G     + +L++   L  H+GCVNTVS   DG   ++GSDD+ + +WD E+  +++   SGHT NVFQAR +PYTD++ +  C  D
Sbjct:   70 RHGIVDLRQREVGDL-APRTFAHRLGASEGLILRLQILRRLDKHKGCVNTVSFNADGNILVSGSDDRMIMLWDWEAGLVRLSFHSGHTDNVFQARFMPYTDDQTIVTCAAD 179          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A8J5KLQ9_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KLQ9_ZINOF)

HSP 1 Score: 80.1 bits (196), Expect = 5.410e-14
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   99 FLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 177
             + + ++   L  HRGCVNTVS   DG   I+GSDDQKV +WD ++  +K+   SGH++NVF AR +PYTD+  +  C  D
Sbjct:   46 LVMRFRIYRKLDNHRGCVNTVSFNADGDILISGSDDQKVILWDWDAGYIKLSFDSGHSNNVFHARFMPYTDDRTIVTCAAD 126          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A061R2D6_9CHLO (WD repeat-containing protein 42A (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R2D6_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 1.230e-13
Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0
Query:   48 AAAAAGAPRSTNIHDLIRARQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 177
            AA  AG P       +IRAR+      F  R++A        +++ G     +++++L   L GH+GCVNTVS T DG   ++GSDDQ++ +W+  + + +    SGH++NVFQA+ +P+T++  +  C  D
Sbjct:   20 AALTAGRPA------VIRAREMGD---FGKRISASY------RRSAGTGESLVKRMELQRTLDGHQGCVNTVSFTADGATLVSGSDDQRIILWNWNTGKWRTRYPSGHSNNVFQAKMMPHTNSSTIVTCAAD 136          
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A061S7Z4_9CHLO (WD repeat-containing protein 42A n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S7Z4_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 1.480e-13
Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0
Query:   48 AAAAAGAPRSTNIHDLIRARQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 177
            AA  AG P       +IRAR+      F  R++A        +++ G     +++++L   L GH+GCVNTVS T DG   ++GSDDQ++ +W+  + + +    SGH++NVFQA+ +P+T++  +  C  D
Sbjct:   20 AALTAGRPA------VIRAREMGD---FGKRISASY------RRSAGTGESLVKRMELQRTLDGHQGCVNTVSFTADGATLVSGSDDQRIILWNWNTGKWRTRYPSGHSNNVFQAKMMPHTNSSTIVTCAAD 136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN6_ECTSI3.060e-3254.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJD8_9PHAE1.070e-3154.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3M7KVX0_AUXPR1.890e-1950.00RING-type domain-containing protein n=2 Tax=Auxeno... [more]
A0A1D1ZPA7_AUXPR2.120e-1950.00Uncharacterized protein (Fragment) n=2 Tax=Auxenoc... [more]
Q9FWE0_ORYSJ3.330e-1535.40Putative WD-repeat containing protein n=1 Tax=Oryz... [more]
A0A7N0U6Q2_KALFE1.150e-1440.82Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A8B7CTM9_PHODC2.250e-1436.94DDB1- and CUL4-associated factor 8 isoform X1 n=2 ... [more]
A0A8J5KLQ9_ZINOF5.410e-1445.68Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
A0A061R2D6_9CHLO1.230e-1334.09WD repeat-containing protein 42A (Fragment) n=1 Ta... [more]
A0A061S7Z4_9CHLO1.480e-1334.09WD repeat-containing protein 42A n=1 Tax=Tetraselm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 102..141
e-value: 5.1E-9
score: 46.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 105..141
e-value: 4.9E-7
score: 30.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 109..150
score: 14.853
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 49..176
e-value: 4.5E-14
score: 53.8
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 74..175
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 109..150
score: 13.58
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 100..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2217contigH-paniculata_contig2217:14860..17735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2217.5878.1mRNA_H-paniculata_contig2217.5878.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2217 14552..17848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2217.5878.1 ID=prot_H-paniculata_contig2217.5878.1|Name=mRNA_H-paniculata_contig2217.5878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MSDTSIPSPPPKNAEDNNHSRPGSLEDSMPKRKRQRPTQSYRGRHGAAAA
AAGAPRSTNIHDLIRARQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFL
RKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVD
IASGHTHNVFQARALPYTDNEKVCMTDPLYTTYYIHDRNFSPPGQIRIAA
NVFH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf