mRNA_H-paniculata_contig2217.5878.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2217.5878.1
Unique NamemRNA_H-paniculata_contig2217.5878.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: D7FTN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN6_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.570e-30
Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 3 
Query:  285 TNIHDLIRARQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 644
            ++IH L+R RQ+ G  RF++R   G  S   L    G + + LR+L+LS  L+GH GCVNTVS +PDGKYWI+GSDD K+ IWDCESH+ K    S H +NVFQAR LPYTDNEK+  C  D
Sbjct:  141 SSIHTLLRERQRRGAGRFLTRE--GRRSVCPLHYAYGGNPNTLRRLELSGELRGHDGCVNTVSCSPDGKYWISGSDDLKLMIWDCESHKRKTSFHSRHQNNVFQARFLPYTDNEKIVSCAAD 260
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A6H5KJD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD8_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 5.390e-30
Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 3 
Query:  285 TNIHDLIRARQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 644
            ++IH L+R RQ+ G  RF++R   G  S   L    G +   LR+L+LS  L+GH GCVNTVS +PDGKYWI+GSDD K+ IWDCESH+ K    S H +NVFQAR LPYTDNEK+  C  D
Sbjct:  139 SSIHTLLRERQRRGAGRFLTRE--GRRSVCPLHFAYGGNPITLRRLELSGELRGHEGCVNTVSCSPDGKYWISGSDDLKLMIWDCESHKRKTSFHSRHRNNVFQARFLPYTDNEKIVSCAAD 258
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A3M7KVX0_AUXPR (RING-type domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KVX0_AUXPR)

HSP 1 Score: 95.9 bits (237), Expect = 4.160e-18
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 3 
Query:  357 GMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV 632
            G+ SP   +  VG   H L++L L+  L+GH GCVNTV+ TPDG+  ++GSDDQ +K+WD       +   SGHT NVFQARA+P TDN  V
Sbjct:   13 GLLSPSRFRSRVGASLHLLQRLGLTRRLEGHTGCVNTVTFTPDGEGLLSGSDDQLIKLWDWRRGAEVLSYDSGHTDNVFQARAIPGTDNRTV 104
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A1D1ZPA7_AUXPR (Uncharacterized protein (Fragment) n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZPA7_AUXPR)

HSP 1 Score: 95.9 bits (237), Expect = 5.170e-18
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 3 
Query:  357 GMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV 632
            G+ SP   +  VG   H L++L L+  L+GH GCVNTV+ TPDG+  ++GSDDQ +K+WD       +   SGHT NVFQARA+P TDN  V
Sbjct:   33 GLLSPSRFRSRVGASLHLLQRLGLTRRLEGHTGCVNTVTFTPDGEGLLSGSDDQLIKLWDWRRGAEVLSYDSGHTDNVFQARAIPGTDNRTV 124
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: UPI001F5DE9A2 (DDB1- and CUL4-associated factor 8 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DE9A2)

HSP 1 Score: 88.2 bits (217), Expect = 1.320e-15
Identity = 56/163 (34.36%), Postives = 81/163 (49.69%), Query Frame = 3 
Query:  408 FLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTDPLYTTYYIHDRNFSPPGQIRIAANVFH*KKLSIRLSFRRSPYFLYAPDHPRLLIMFVNRVDRGTSLYVSAHSQTRTNTSSFL 890
             + +L++   L  H GCVNTV    DG   I+GSDDQKV +WD ++  +K+   SGH  NVFQAR +PYTD+  +  C  D       + D   +    +       H  KL+I      SPY  Y+     L+  F  R +  T L+V  +S T++  SS +
Sbjct:   36 LVMRLQIHRKLDRHTGCVNTVGFNADGDTLISGSDDQKVMLWDWDTGAVKMQFHSGHGDNVFQARFMPYTDDRTIVTCAADGQVRVAKVQDDGDALTTLLAEHDGRAH--KLAIEPG---SPYIFYSCGEDGLVQHFDLRTNTATELFVCRNSLTKSGYSSHV 193
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: J3N4K5_ORYBR (Uncharacterized protein n=6 Tax=Oryza TaxID=4527 RepID=J3N4K5_ORYBR)

HSP 1 Score: 85.1 bits (209), Expect = 1.310e-14
Identity = 53/163 (32.52%), Postives = 83/163 (50.92%), Query Frame = 3 
Query:  408 FLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTDPLYTTYYIHDRNFSPPGQIRIAANVFH*KKLSIRLSFRRSPYFLYAPDHPRLLIMFVNRVDRGTSLYVSAHSQTRTNTSSFL 890
             + +L++   L  H GCVNTV    DG   I+GSDDQ V +W+ ++  +K+   SGH+ NVFQAR +PYTD++ +  C  D       + D    P   +       H  KL+I      SPY  Y+     L+  F  R +  T+L++  +S +++  SS +
Sbjct:    3 LVMRLQIHRKLNRHTGCVNTVGFNADGDTLISGSDDQMVMLWNWDTGAVKLQFHSGHSDNVFQARFMPYTDDQTIVTCAADGEVRLAKVADGGDVPTTLLGDHDGRAH--KLAIEPG---SPYIFYSCGEDGLVQHFDLRTNTATNLFLCRNSLSKSGLSSSI 160
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A0E0MAB5_ORYPU (Integrase-type domain-containing protein n=12 Tax=Oryzinae TaxID=1648021 RepID=A0A0E0MAB5_ORYPU)

HSP 1 Score: 85.1 bits (209), Expect = 1.460e-14
Identity = 56/178 (31.46%), Postives = 85/178 (47.75%), Query Frame = 3 
Query:  357 GMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTDPLYTTYYIHDRNFSPPGQIRIAANVFH*KKLSIRLSFRRSPYFLYAPDHPRLLIMFVNRVDRGTSLYVSAHSQTRTNTSS 884
            G+  P    +        + +L++   L  H GCVNTV    DG   I+GSDDQ V +WD ++  +K+   SGH++NVFQAR +PYT+++ +  C  D       I D    P   +       H  KL+I      SPY  Y+     L+  F  R +  T L+   +S +++  SS
Sbjct:   27 GLLLPRRFARRAAASEDLVMRLQVHRKLNRHTGCVNTVGFNADGDTLISGSDDQMVMLWDWDTGAIKLQFHSGHSNNVFQARFMPYTNDQTIVTCAADGEVRLAKIGDGGDVPTTLLGDHDGRAH--KLAIEPG---SPYIFYSCGEDGLVQHFDLRTNTATKLFQCRNSFSKSGHSS 199
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A8B7CTM9_PHODC (DDB1- and CUL4-associated factor 8 isoform X1 n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7CTM9_PHODC)

HSP 1 Score: 84.7 bits (208), Expect = 2.320e-14
Identity = 54/187 (28.88%), Postives = 86/187 (45.99%), Query Frame = 3 
Query:  318 KHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTDPLYTTYYIHDRNFSPPGQIRIAANVFH*KKLSIRLSFRRSPYFLYAPDHPRLLIMFVNRVDRGTSLYVSAHSQTRT 872
            +HG V    R    + +P      +G     + +L++   L  H+GCVNTVS   DG   ++GSDD+ + +WD E+  +++   SGHT NVFQAR +PYTD++ +  C  D       +        GQ+       H  ++        SP+  Y+     L+  F  R    T L++    Q R+
Sbjct:   70 RHGIVDLRQREVGDL-APRTFAHRLGASEGLILRLQILRRLDKHKGCVNTVSFNADGNILVSGSDDRMIMLWDWEAGLVRLSFHSGHTDNVFQARFMPYTDDQTIVTCAADG-----EVRHAQLREGGQVATMMLAQHEGRVHKMAIEPGSPHIFYSCGEDGLVQHFDLRTKCATRLFICRSFQDRS 250
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: Q9FWE0_ORYSJ (Putative WD-repeat containing protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q9FWE0_ORYSJ)

HSP 1 Score: 78.6 bits (192), Expect = 3.290e-14
Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 3 
Query:  312 RQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTD 644
            + +HG      R   G+  P    +        + +L++   L  H GCVNTV    DG   I+GSDDQ V +WD ++  +K+   SGH++NVFQAR +PYT+++ +  C  D
Sbjct:   10 KARHGAADLCLREV-GLLLPRRFARRAAASEDLVMRLQVHRKLNRHTGCVNTVGFNADGDTLISGSDDQMVMLWDWDTGAIKLQFPSGHSNNVFQARFMPYTNDQTIVTCAAD 121
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BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Match: A0A7N0U6Q2_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U6Q2_KALFE)

HSP 1 Score: 83.6 bits (205), Expect = 4.990e-14
Identity = 54/168 (32.14%), Postives = 83/168 (49.40%), Query Frame = 3 
Query:  357 GMWSPDELQQTVGRDGHFLRKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVDIASGHTHNVFQARALPYTDNEKV--CMTDPLYTTYYIHDRNFSPPGQIR---IAANVFH*KKLSIRLSFRRSPYFLYAPDHPRLLIMFVNRVDRGTSLY 845
            G  +P   ++T+G     + +L+L   L+ HRGCVNTVS   DG   ++GSDDQ+V +WD  +   K+   SGH  NVFQA+ +P+T++  V  C  D       +     S  G++    +A +     KL+I      SP+  Y+     L+  F  R    T L+
Sbjct:   23 GAVTPRSFERTLGGSQDLVLRLQLFKKLEKHRGCVNTVSFNADGNILMSGSDDQRVILWDWMTGNAKLTFQSGHADNVFQAKFMPFTEDRSVVTCAADG-----QVRHVEISDGGRVETTLLAKHEARAHKLAIEPG---SPHIFYSCGEDGLVQHFDLRTPTATELF 182
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2217.5878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN6_ECTSI1.570e-3054.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJD8_9PHAE5.390e-3054.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3M7KVX0_AUXPR4.160e-1850.00RING-type domain-containing protein n=2 Tax=Auxeno... [more]
A0A1D1ZPA7_AUXPR5.170e-1850.00Uncharacterized protein (Fragment) n=2 Tax=Auxenoc... [more]
UPI001F5DE9A21.320e-1534.36DDB1- and CUL4-associated factor 8 n=1 Tax=Lolium ... [more]
J3N4K5_ORYBR1.310e-1432.52Uncharacterized protein n=6 Tax=Oryza TaxID=4527 R... [more]
A0A0E0MAB5_ORYPU1.460e-1431.46Integrase-type domain-containing protein n=12 Tax=... [more]
A0A8B7CTM9_PHODC2.320e-1428.88DDB1- and CUL4-associated factor 8 isoform X1 n=2 ... [more]
Q9FWE0_ORYSJ3.290e-1435.40Putative WD-repeat containing protein n=1 Tax=Oryz... [more]
A0A7N0U6Q2_KALFE4.990e-1432.14Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2217contigH-paniculata_contig2217:14552..17848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score133.7
Seed ortholog evalue1e-28
Seed eggNOG ortholog2880.D7FTN6
Preferred nameDCAF8
KEGG koko:K11795,ko:K11804,ko:K22204
KEGG TC1.A.46.1
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0031461,GO:0031974,GO:0031981,GO:0032991,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:0080008,GO:1901564,GO:1902494,GO:1990234
EggNOG free text desc.protein modification by small protein conjugation or removal
EggNOG OGsKOG1334@1,KOG1334@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04121
Exons2
Model size1036
Cds size615
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2217.5878.1prot_H-paniculata_contig2217.5878.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2217 14860..17735 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929611.209661-UTR-H-paniculata_contig2217:14551..148591622929611.209661-UTR-H-paniculata_contig2217:14551..14859Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2217 14552..14859 -
1691480935.1877856-UTR-H-paniculata_contig2217:14551..148591691480935.1877856-UTR-H-paniculata_contig2217:14551..14859Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2217 14552..14859 -
1622929611.2677655-UTR-H-paniculata_contig2217:17735..178481622929611.2677655-UTR-H-paniculata_contig2217:17735..17848Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2217 17736..17848 -
1691480935.2226179-UTR-H-paniculata_contig2217:17735..178481691480935.2226179-UTR-H-paniculata_contig2217:17735..17848Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2217 17736..17848 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929611.2291343-CDS-H-paniculata_contig2217:14859..150601622929611.2291343-CDS-H-paniculata_contig2217:14859..15060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2217 14860..15060 -
1691480935.197886-CDS-H-paniculata_contig2217:14859..150601691480935.197886-CDS-H-paniculata_contig2217:14859..15060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2217 14860..15060 -
1622929611.2474558-CDS-H-paniculata_contig2217:17321..177351622929611.2474558-CDS-H-paniculata_contig2217:17321..17735Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2217 17322..17735 -
1691480935.2074997-CDS-H-paniculata_contig2217:17321..177351691480935.2074997-CDS-H-paniculata_contig2217:17321..17735Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2217 17322..17735 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2217.5878.1

>prot_H-paniculata_contig2217.5878.1 ID=prot_H-paniculata_contig2217.5878.1|Name=mRNA_H-paniculata_contig2217.5878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MSDTSIPSPPPKNAEDNNHSRPGSLEDSMPKRKRQRPTQSYRGRHGAAAA
AAGAPRSTNIHDLIRARQKHGRVRFVSRVAAGMWSPDELQQTVGRDGHFL
RKLKLSAVLKGHRGCVNTVSATPDGKYWITGSDDQKVKIWDCESHELKVD
IASGHTHNVFQARALPYTDNEKVCMTDPLYTTYYIHDRNFSPPGQIRIAA
NVFH*
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mRNA from alignment at H-paniculata_contig2217:14552..17848-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2217.5878.1 ID=mRNA_H-paniculata_contig2217.5878.1|Name=mRNA_H-paniculata_contig2217.5878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3297bp|location=Sequence derived from alignment at H-paniculata_contig2217:14552..17848- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCTTGCCTTACACAGAAAATGGAGAGAACCATCATAGCCCACCGCTGAC
CGTCTCTCACTTGGATTCAGCTGCTGATACTCCTTCGTTTGATTCAGAAG
CTGCCTCAACGCCATGTCTGATACTTCTATTCCATCTCCTCCTCCCAAAA
ATGCAGAGGACAACAATCACAGTCGCCCAGGGAGCCTCGAAGACAGCATG
CCTAAGCGCAAGCGGCAGAGACCTACGCAGTCCTATAGGGGGAGGCATGG
TGCAGCGGCAGCGGCGGCCGGCGCACCCCGAAGCACCAACATCCATGATC
TGATACGCGCCAGACAGAAGCACGGGCGCGTGCGGTTCGTGTCTCGAGTG
GCTGCCGGCATGTGGAGTCCTGATGAATTGCAGCAGACGGTGGGCAGAGA
CGGTCATTTCTTGCGCAAGTTGAAGCTGTCGGCCGTGCTGAAGGGACACC
GAGGGTGCGTGAACACGGTCTCTGCCACGCCGGACGGAAAATACTGGATT
ACGGGAAGTGACGATCAGAAGGTTAAGGTCAGTGAAGTTGGGCTGCGCGG
GGGGTGGGCAGGGGTGGAAGTTGGGGTGGAATGGGGATGACTAACCATAA
GTTTGTAAGTAGTTTGTGATGCAGTGAAGATGTACGGAGAATGAGTTCTC
TTTGTTTTGAAAGGGTTCACCACGGGGTGTCCAGCAAGATACTGGCGAGT
ACAGTCCACAGCGATCTGGACGGTCTGTACAGATGGGAGCTGAATATGGG
CAGTAGGCAGTGCTGTAGACAGGTGCAAGACAGGCGTGGCTCTACAAATC
TACTCAGCTGTTCCGTACTCACATTGTACGCAGACGATAATATGAGATTA
GGAGAGGGAGCTCCAAGCTGCTCTTGGACCTCCTGTACAGAGCAAGGCAG
GGAAGGCAGGCAGACGGCCCTTCCCAGCGTCCCCTGTAGCCGCTCCTAGA
CGCCTCAAAACTAGTGGCAAGTGATGAAAGCAACAAGAAAGTGCTCCACT
TCAGTCGCGCTCTTCAGTCGAACTCTTCAGTCATCTTACCGCAGTCGCGG
AGAATGGCACGCTCTCTTCGGATGACAAGCGCTGGTCGTGGAGGGTTTGC
GGTAATCGCTTGGGGCACAGCGGCGTACCTATGATGGCGAATCTATGGAG
AGACAAGAGACCATCGACCTCCCATCCCGTGCAATGCCGCAACAAAGTGG
AATGCTGGGTTCTGGTCGGCCCAGTCTGCGTTTCAAGAGGATGATACCAG
CTTGTCGTCACCCTTGCCTTCCTATCCTAAACTGAACTTATCAGGGTTTA
TTGGGGGAACACGCCGAACACGAGGTAACTGCTGCAATATCGACTCGCGA
TGGATGGAGCGTGACTGTTGCAATTTTTGCGCGCTGCCCAGCTAGATATC
TTTCGGTTTTTCGCTTTGTGAACGAGGTCGACAAGCCTGTGAAATGTGCT
GGATGAAGCCCCTCATGCCCTGTATGCTGCCGTTTCATCGCTCCATGCCA
CCAGATAGCCATTCTCCGTTGGGGGGGAATGAAGGTTATATGTCGTTCCC
AGTCGTGTTCCCAATTTGCATTACGATTTTCTTTTTTCGTGCTGCCCAGC
TAGACATCCCTCGGTTCGTCGGTTTATGAACAAGGTCGGCAAGTTCGTTA
CATGTACGGGATGAAGTCCCCCGTACCCCGTATATTTCCGTTTCATCGCT
CCAAGGCACAGAGCAACCCCCGTTTGAGGGGGGTGAGGGTCGTTGGTACT
GTGTTCCCAGTTACGTATACATCCTACCAACAATTGAGCGTACATACCGA
AAAAAGGGGGGTATCGCGAAAGAGGGATGCGCGATATATAGACAGATTTA
TAGGGAAAACAATGGGGCTACGTCTGTTTTTCGACTCTCCTAGTTAAGGA
AAACACAGTAGTCGATCTGTTTTTTCCGTGTTCATGCTGGCTGGGTGGCT
GTCTGGCCCTTGAAATGTGTTCTTGAGGACCATTACGCTTAGCGTTGCAC
GCATTTATCCACATTCGCCGCTGGCGAGCCCCCGACCCTCACAGTGGGAA
GGCCCCTACACGCAAGATATCTTGTGGCAAGTGGCTAAACCAACAAAAAA
CACGTGCTTCGCTTTTATTCTTGCCATTTTAAGAAGCCGTATCCGAGTTC
CCACGTGGTCTTGAGGCACCTAATTATATATATATATATATAACACTATT
CCACGCGTTACAACACAACAAGTAAGGCTAGGACAGGTAAAACGCGAGCG
AAGTGTCAGGAATTTGAATAGCCTTTTGACTGAAAACAACACTGCGAAGT
TAGCTTGCAACGCTGCACGAGCCAGATGTTCGTTGTTGCGCCATTTTTTA
CGTTTTATTCAATATACTAGTAGCATAGCCTCGGCTACACGTGTGCAACG
CGTGTTTCTCTTTGTGCCCATTTGTACAAAATTCTTGGCCCACGCACAAG
GAGTCGCCGTCGTAACAGTGGCTCACTACGCTCTATGCGGGCACATTACT
CGTAACTCATATAGACCGAGGGGAACATTTGCATTTGTCCAATGCTCTGA
TCGCAGGTCTGAGCGATAGGACTGATGCATCATGGAAGGAGAAAGGTGGT
TGTTCCAAGAATTTGTCCACGTTTTCTTTGAAAATGCGATTCCCAGTAGA
GAGAACGAGGGAGAGGGTGGAGAGACAGACCTGACAGAATAAAGCATGGA
AGATTTTTTGAGATGCCCACCGTGGAGTTCCAGAATTACTATTGAATATA
GACGAATATACGTATGTATGTGTGTTGAATATGTGCAGATCTGGGACTGC
GAAAGCCATGAGCTCAAGGTGGACATCGCCAGCGGACACACCCACAACGT
CTTCCAGGCACGGGCTCTTCCTTACACGGACAACGAAAAGGTATGCATGA
CAGACCCACTGTATACTACGTATTACATCCACGACAGGAACTTTTCACCC
CCCGGACAAATACGAATAGCTGCAAATGTTTTTCATTAAAAAAAGTTGAG
TATTCGTCTGAGTTTCAGAAGGAGCCCGTATTTCCTATATGCGCCGGATC
ATCCACGACTGCTCATAATGTTCGTAAATCGAGTGGACAGAGGTACTTCA
TTATATGTGTCTGCTCATTCTCAAACTAGGACGAATACTTCCAGTTTTTT
GTGAAAACCATTTGCAAGTGTTCGCATATTTTCGGGGGGTGAAAATTTTG
GACCCACAGGGTCACTTAATGTAGATTTAACCTGTACGTACAAAACTCAT
GGTGCATGCGTTATTCCACGTGATCTTCCTTCTAAGACTTCAAGGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig2217:14552..17848-

>mRNA_H-paniculata_contig2217.5878.1 ID=mRNA_H-paniculata_contig2217.5878.1|Name=mRNA_H-paniculata_contig2217.5878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig2217:14552..17848- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTGATACTTCTATTCCATCTCCTCCTCCCAAAAATGCAGAGGACAA
CAATCACAGTCGCCCAGGGAGCCTCGAAGACAGCATGCCTAAGCGCAAGC
GGCAGAGACCTACGCAGTCCTATAGGGGGAGGCATGGTGCAGCGGCAGCG
GCGGCCGGCGCACCCCGAAGCACCAACATCCATGATCTGATACGCGCCAG
ACAGAAGCACGGGCGCGTGCGGTTCGTGTCTCGAGTGGCTGCCGGCATGT
GGAGTCCTGATGAATTGCAGCAGACGGTGGGCAGAGACGGTCATTTCTTG
CGCAAGTTGAAGCTGTCGGCCGTGCTGAAGGGACACCGAGGGTGCGTGAA
CACGGTCTCTGCCACGCCGGACGGAAAATACTGGATTACGGGAAGTGACG
ATCAGAAGGTTAAGATGTCTGATACTTCTATTCCATCTCCTCCTCCCAAA
AATGCAGAGGACAACAATCACAGTCGCCCAGGGAGCCTCGAAGACAGCAT
GCCTAAGCGCAAGCGGCAGAGACCTACGCAGTCCTATAGGGGGAGGCATG
GTGCAGCGGCAGCGGCGGCCGGCGCACCCCGAAGCACCAACATCCATGAT
CTGATACGCGCCAGACAGAAGCACGGGCGCGTGCGGTTCGTGTCTCGAGT
GGCTGCCGGCATGTGGAGTCCTGATGAATTGCAGCAGACGGTGGGCAGAG
ACGGTCATTTCTTGCGCAAGTTGAAGCTGTCGGCCGTGCTGAAGGGACAC
CGAGGGTGCGTGAACACGGTCTCTGCCACGCCGGACGGAAAATACTGGAT
TACGGGAAGTGACGATCAGAAGGTTAAGATCTGGGACTGCGAAAGCCATG
AGCTCAAGGTGGACATCGCCAGCGGACACACCCACAACGTCTTCCAGGCA
CGGGCTCTTCCTTACACGGACAACGAAAAGGTATGCATGACAGACCCACT
GTATACTACGTATTACATCCACGACAGGAACTTTTCACCCCCCGGACAAA
TACGAATAGCTGCAAATGTTTTTCATTAAATCTGGGACTGCGAAAGCCAT
GAGCTCAAGGTGGACATCGCCAGCGGACACACCCACAACGTCTTCCAGGC
ACGGGCTCTTCCTTACACGGACAACGAAAAGGTATGCATGACAGACCCAC
TGTATACTACGTATTACATCCACGACAGGAACTTTTCACCCCCCGGACAA
ATACGAATAGCTGCAAATGTTTTTCATTAA
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