mRNA_H-paniculata_contig22111.5854.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2KMT4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT4_9BRAS) HSP 1 Score: 83.6 bits (205), Expect = 7.770e-16 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 97 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 447
C+GC K+HR T R ER++ DL GP R +S G Y+++ VDDYSR+ V F+K+KS+ + Q + G K+ +RT+N GEF + L +HGI E +
Sbjct: 476 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 593
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2JZV9_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JZV9_9BRAS) HSP 1 Score: 83.6 bits (205), Expect = 7.780e-16 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 97 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 447
C+GC K+HR T R ER++ DL GP R +S G Y+++ VDDYSR+ V F+K+KS+ + Q + G K+ +RT+N GEF + L +HGI E +
Sbjct: 162 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 279
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2KKQ4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KKQ4_9BRAS) HSP 1 Score: 83.6 bits (205), Expect = 7.790e-16 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 97 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 447
C+GC K+HR T R ER++ DL GP R +S G Y+++ VDDYSR+ V F+K+KS+ + Q + G K+ +RT+N GEF + L +HGI E +
Sbjct: 476 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 593
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2KB33_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB33_9BRAS) HSP 1 Score: 83.6 bits (205), Expect = 8.100e-16 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 97 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 447
C+GC K+HR T R ER++ DL GP R +S G Y+++ VDDYSR+ V F+K+KS+ + Q + G K+ +RT+N GEF + L +HGI E +
Sbjct: 476 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 593
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2JWG0_9BRAS (Uncharacterized protein n=10 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2JWG0_9BRAS) HSP 1 Score: 83.6 bits (205), Expect = 8.230e-16 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 97 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 447
C+GC K+HR T R ER++ DL GP R +S G Y+++ VDDYSR+ V F+K+KS+ + Q + G K+ +RT+N GEF + L +HGI E +
Sbjct: 476 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 593
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2KB39_9BRAS (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB39_9BRAS) HSP 1 Score: 83.6 bits (205), Expect = 8.430e-16 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 97 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 447
C+GC K+HR T R ER++ DL GP R +S G Y+++ VDDYSR+ V F+K+KS+ + Q + G K+ +RT+N GEF + L +HGI E +
Sbjct: 750 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 867
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A1D2M5N7_ORCCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2M5N7_ORCCI) HSP 1 Score: 82.4 bits (202), Expect = 1.940e-15 Identity = 55/151 (36.42%), Postives = 82/151 (54.30%), Query Frame = 1
Query: 10 HRLLAHAS-----EQITRDTAATVGV-VLTGEWGGCKGCSTAKAHRFAVPKKTDR-ATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYG-DFHLELGEHGIIH 438
H LAH + E I R+ AA + + L+GE+ C+ C KAH+ P+ + A AE ++VDL G TSLGGSSY ++I D+ + F+AV F+K K++A + Y+ +V ++R++N EF D L E GIIH
Sbjct: 451 HSRLAHVNLDYIKETIKREAAAGIALGELSGEFS-CEECILGKAHKSPFPRVPENTAITPAEIMHVDLSGKYDTTSLGGSSYFLLIKDERTSFRAVYFLKSKAEAAGCIMRYVNFIENQTNHQVRILRSDNGTEFVNHDLTSFLNEKGIIH 600
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6H5GTD8_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GTD8_9HEMI) HSP 1 Score: 82.0 bits (201), Expect = 2.760e-15 Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 97 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYG-DFHLELGEHGIIHELTPS 453
C C K + PKK+ R + + +++DL GPMR S GG+ Y + ++DDYSR+ ++F+KKKSD A + + T KG K+ I+++N EF +F L E+GI LT +
Sbjct: 440 CTICLQGKMTQTPFPKKSSRTSQKLDLIHMDLCGPMRVQSKGGAKYFLTLIDDYSRWCEIRFLKKKSDVFAEFKKFKNLVETQKGRKIKCIQSDNGKEFCNREFDRYLEENGISRRLTVN 559
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6H5KGJ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ8_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 2.920e-15 Identity = 59/171 (34.50%), Postives = 78/171 (45.61%), Query Frame = 1
Query: 10 HRLLAHASEQITRDTAATVGVVLT-GEWGGCKGCSTAKAHRFA---------------------VPKKTD-RATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPK-GLKVGVIRTENSGEFYGDFHLELGEHGIIHELTP 450
H H E + R TA GV LT G C GCS K V K T RA R+Y+DLGG M+ S+G Y ++I DD+SR+ V F+K KSDA + ++ +Y T + +V + RT++ GEF G F HGI E TP
Sbjct: 139 HLAHGHDHETLLRITAEQQGVQLTDGPLLPCLGCSVFKGXXXXXXXXXXXXXXXXXXXXXQVKPVQKSTSTRADKKLFRVYLDLGGKMKTRSIGDHWYTLMIRDDFSRWTRVFFLKHKSDAAVGFEKFLVDYRTKEVPCEVYITRTDDGGEFQGQFAEVFRRHGIKQEFTP 309
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A8J5ESC8_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ESC8_ZINOF) HSP 1 Score: 81.3 bits (199), Expect = 5.020e-15 Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 91 GGCKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 447
G C+GC K+HR T R T ER++ DL GP + TS +Y+++ VDDYSRF V F+K KS+ + + G K+ +RT+N GEF + L ++GI EL+
Sbjct: 384 GVCEGCQFGKSHRLPFENSTSRCTTPLERIHSDLMGPTKTTSYSEGNYMLLFVDDYSRFTWVYFVKHKSETFSIFLDFKKIVEGELGRKIKTLRTDNGGEFCSNEFLSFCRDNGIKRELS 503 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22111.5854.1 >prot_H-paniculata_contig22111.5854.1 ID=prot_H-paniculata_contig22111.5854.1|Name=mRNA_H-paniculata_contig22111.5854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp MNKHRLLAHASEQITRDTAATVGVVLTGEWGGCKGCSTAKAHRFAVPKKTback to top mRNA from alignment at H-paniculata_contig22111:87..539- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22111.5854.1 ID=mRNA_H-paniculata_contig22111.5854.1|Name=mRNA_H-paniculata_contig22111.5854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=453bp|location=Sequence derived from alignment at H-paniculata_contig22111:87..539- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22111:87..539- >mRNA_H-paniculata_contig22111.5854.1 ID=mRNA_H-paniculata_contig22111.5854.1|Name=mRNA_H-paniculata_contig22111.5854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig22111:87..539- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |