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Homology
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: D8LN17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN17_ECTSI) HSP 1 Score: 346 bits (887), Expect = 7.520e-107 Identity = 198/338 (58.58%), Postives = 236/338 (69.82%), Query Frame = 1
Query: 1 MEERHLLLAGLFTVCAVSTVALARLLIVLRIFR---RRQQRWSEPSINQYSTIYSNSNAHTATTNMGRGSKSRILLPSLLFHVLLFLCLVTEVPVYAVRYVSTLHSSGVG-------RPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEPNEWTALMNRSMLVLCLCYLVVTSVAVSVCLGLGNVKFFFSSVAFMLFCAYSIAALLLLGSCFLVLGCLLQRRICRVLVTGSCTPRLTARVVRLNVVMLACFVCFTLRAFMLAALVQVQAEGEEDRKPGMGWKKWEWDMRMEWAPHVIPCIAMLYLMRNAGEP----------PSGESVEGNETTEFGG 954
M E LLAGL VCA ++QQ ++ ++ Q H T+ R + SR+++PSLLFHVL+FLCL EVPVYA R++S SSG+ R LYALH+ SYLLLF AF V+VTLW+DVAVFEPNE TALMNRSM+ LC+CY++VT +AVSVCLG+GNVK+F SS AF+LFCAYSIA LLLLG+ FLVLGCLLQ+RICRVLVTGSCT RLTAR+VRLNVVMLACF CFT+RA MLA L+Q QAEGEE GWK+ E DMR+EWA HVIPC+AMLYLMR AGEP P+G+ G+E+T F G
Sbjct: 1 MREEQALLAGLVAVCAXXXXXXXXXXXXXXXXXXXXQQQQSFTNGNLGQEEE-----RRHLQATDADRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLS---SSGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCLGVGNVKYFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGKEYGGDESTGFSG 330
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: A0A836C8B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B0_9STRA) HSP 1 Score: 205 bits (521), Expect = 2.810e-54 Identity = 139/346 (40.17%), Postives = 187/346 (54.05%), Query Frame = 1
Query: 1 MEERHLLLAGLFTVCAVSTVALARLLIVLR-IFRRRQQR--WSEPSINQYSTIYSNSNAHTATTNMGRGSKSRILLPSLLFHVLLFLCLVTEVPVYAVRYVSTLH---SSGVGRPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEPNEWTALMNRSMLVLCLCYLVVTSVAVSVCL-GLGNVKFFFSSVAFMLFCAYSIAALLLLGSCFLVLGCLLQRRICRVL------------------------------------------VTGSCTPRLTARVVRLNVVMLACFVCFTLRAFMLAALVQVQAEGEEDRKPGMGWKKWEWDMRMEWAPHVIPCIAMLYLMR 891
+ + LAGL T + +A RLL+VLR ++R R +EP H AT + + +L +FHVL+FLCL EVPVYA YV+ S VGR LYALHL SYLLL AFC+IV LWS VA FEP+ W L NR +LVLC+ Y +VT+VAV CL + + +F+S+ F+ FCA+SI ALLLL +CFLVLGCL+Q+RIC L LT V+RLN V+L CFVCF+ RA +L L++++ G + GW +W+ ++ +EW P+V+PC+A+LYLMR
Sbjct: 2 LSDPQCALAGLVTTALAAAIAAWRLLVVLRQVWRYGGWRRVLAEPFSKDAYEDLDRQPHHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFEVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALG---GWTRWQQEVYVEWIPNVVPCLALLYLMR 344
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: A0A7S3XM64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM64_HETAK) HSP 1 Score: 120 bits (301), Expect = 7.090e-26 Identity = 79/239 (33.05%), Postives = 124/239 (51.88%), Query Frame = 1
Query: 226 LLFHVLLFLCLVTEVPVYAVRYVSTLH-----SSGVGRPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEP-NEWTALMNRSMLVLCLCYLVVTSVAVSVCLGLGNVKFFFSSVAFMLFCAYSIAALLLLGSCFLVLGCLLQRRICRVLVTGSC-TPRLTARVVRLNVVMLACFVCFTLRAFMLAALVQVQAEGEEDRKPGMG-----WKKWEWDMRMEWAPHVIPCIAMLYLMRNAGEP 906
LLFH L+ L L+ ++P+Y ++ S LY +++ SY LLFCAFC+++ LW+ + +F + W ++ RS++ +C+ Y + + A C+ ++ + S ++LF I L L FL++GC+LQ RICR L PR A V RLN V+ C + F +RA +L A + A + P W + EW PH+ PCIA++YL+RNA P
Sbjct: 69 LLFHQLILLSLMLQIPLYVCYAIAGSQGEEDSSERYFEYLYPVNIMSYWLLFCAFCLVINLWASLVIFNTGSRWILVLRRSLVAICILYALASMYACLDCIFSSSLWSWLESGTYVLFDFCCIGVLTFLSGAFLIVGCMLQGRICRALAPQERGRPRFWATVARLNGVIFVCTISFAMRAALLLASLAAGAPYADTVSPAAAAPPAALSVETWLVLAEWVPHLAPCIALMYLLRNASGP 307
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: A0A7S2RT50_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT50_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.020e-18 Identity = 78/240 (32.50%), Postives = 120/240 (50.00%), Query Frame = 1
Query: 247 FLCLVTEVPVYAVRYVSTLHSSGVGRPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEPNEWTALMNRSMLVLCL-CYLVVTSVAVSVCLGLGNVKFFFSSVAFMLFCAYSIAALLLLGSCFLVLGCLLQRRICRVLVTGSCT---PRLTARVVRLNVVMLACFVCFTLRAFMLAALVQVQAEGEEDRKPGM-----GWKKWEWDMRMEWAPHVIPCIAMLYLMRNAGE--PPSGESVEGN 933
FL L ++P YA Y + + ++ LH+ S LL+CAFC+ + + + F E R +LV + ++ + S V C+G + F ++ F LF Y++ LL+ + FLV G LLQRR+ VL T P + RLN V L C VCF +RA MLA + + +PG+ G+ WEW M +W +PC+A+LYL R+A + PP+ +G+
Sbjct: 1 FLALAVDIPFYANGY--HVLDNPWSSTVFPLHVLSVFLLYCAFCIFLNI---LVKFVHLERRMKCLRWLLVATIIAFVPIASAVVVDCIGTDSFSEFVAATPFSLFIWYTVGVHLLIAAMFLVAGILLQRRVWNVLGPQRDTHPDPNFWMMLCRLNFVTLCCTVCFLVRAVMLARVAIIS------NRPGLLQTELGFGTWEWLMYEQWITTTVPCLALLYLWRDAAKAGPPALSRADGD 229
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: A0A6H5KRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT8_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 7.270e-6 Identity = 28/50 (56.00%), Postives = 31/50 (62.00%), Query Frame = 1
Query: 832 MRMEWAPHVIPCIAMLYLMRNAGEPPS---------GESVEGNETTEFGG 954
M +EWA HVIPC+AMLYLMR AGEP S G+ GNE T F G
Sbjct: 1 MMLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTAGKDYGGNERTGFTG 50
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-27_001030.1 |
| Exons | 7 |
| Model size | 3023 |
| Cds size | 1056 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig221.5849.1 >prot_H-paniculata_contig221.5849.1 ID=prot_H-paniculata_contig221.5849.1|Name=mRNA_H-paniculata_contig221.5849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp
MEERHLLLAGLFTVCAVSTVALARLLIVLRIFRRRQQRWSEPSINQYSTI
YSNSNAHTATTNMGRGSKSRILLPSLLFHVLLFLCLVTEVPVYAVRYVST
LHSSGVGRPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEPNEWTALMNRS
MLVLCLCYLVVTSVAVSVCLGLGNVKFFFSSVAFMLFCAYSIAALLLLGS
CFLVLGCLLQRRICRVLVTGSCTPRLTARVVRLNVVMLACFVCFTLRAFM
LAALVQVQAEGEEDRKPGMGWKKWEWDMRMEWAPHVIPCIAMLYLMRNAG
EPPSGESVEGNETTEFGGGGEWGGEWGGRSFSSSRPDGKEPSLTHYGLTG
A* back to topmRNA from alignment at H-paniculata_contig221:22646..35424- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig221.5849.1 ID=mRNA_H-paniculata_contig221.5849.1|Name=mRNA_H-paniculata_contig221.5849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12779bp|location=Sequence derived from alignment at H-paniculata_contig221:22646..35424- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGAGCGACACTTGCTGTTGGCGGGCTTGTTCACCGTGTGTGCTGT
GTCCACGGTTGCTTTGGCACGTCTCCTCATCGTGCTGAGGATATTCAGGC
GTCGCCAGCAACGATGGTCAGAGCCGTCAATAAATCAATACTCCACGATA
TACAGCAACAGCAACGCGCACACGGCGACAACGAACATGGGCAGGGGCAG
CAGTGGCGGCGGCATCATCACACAGCAACAGCAGCTAGGTGGCGGTGATG
GTGGCGGAGAGTCTCGGATTCTATTGCCCTCGCTACTATTTCACGTCCTC
CTGTTTCTTTGCCTCGTGACGGAGGTTCCTGTGTACGCGGTGCGCTACGT
GTCGACGCTGCACAGCTCGGGAGTCGGGCGACCTCTGTACGCGTTGCATC
TATGCAGTTACTTGTTGCTGTTCTGTGCCTTCTGCGTGATCGTTACCCTT
TGGAGCGACGTCGCCGTGTTCGAGCCCAACGAATGGACTGCACTGATGAA
TAGGTGAGTAATAGGAAGTGTATGTTGATATGTATGCGGCATGCTAGTGA
GAGAATCGGGTTGGCGAAACAGACTGACTGCTACTGCTGTACTCTGCTCC
GCTGTACTGGATTGCCGTTTGAAGTGTTTTCTTTCTGTCTATTGTTGATC
GTAGTCAACGGTGTCATGCACTTGGTGCAAAAAACATGGCGGGAGAGGCA
TCACGTTTAGGATCGTTATATCGACGGATTTACTTTCGAAAAACCAACTA
TCACGGAGGAACATAATAATCAGGAGCATTTTTTTTGTTTTTTCGGAAAC
TGATATTTTTTTTCTCTCCTTGGTCTACAGATTTTCGCTTCTAGCTGAAA
ACAAAAACATACTCTAAAAACAGTTCCACCGGCATACAGCAACCGATTGG
TGCATATCCTATTGTGTGAGTTACACCTCAAAATGTCAATTTTCTAACTT
GCTCCTGATTATTATGTTCCTTCGTAATATTGTAGAATATGGCCAAAAAA
AACGAAAAAAATGTTGCGATCCGCGTTTCCAGCGCAAGACTGGCCTTAAA
TGGCCAACATGAATCTCCAAAAATCCCTCTGTATTTATTCGTGCCTTCTG
CCAAGAAATCCCTCCTAGCAACTATTTCAGCTGGGCGCACCTTTGCGCAG
AAGTCTCTTTCGCTAGAGTGAAATTTCCGTTATTTTGGGGCCAAGTGATA
GCATTTGCGGTTGTAACTTTTTCTAAATAAATCAGATTTTGAATGGTTCT
TGATTCGCTGAAAGCATCAGTTCTCAGGCTCTACGGAGATACCTGGTTTT
GCGCATACAAATAAATGCTTCTGTGAAAAGTAGTGAAATAAACACCGCCC
GATTTGGCCCAAAATTCGACATCTTTTTTATATGTGCCAAAGCAACGTAT
TTAGTGAGATAGAGGGCCTTCTAACTATATCCCATAGTAGGACATTGGTC
AGAGGAAATATATTCCATTTTGTATTATCGGAACAGTACGGGAGAAGAAC
CTATTTTTTGGGGGGTCCGTTATTCCCCGTGCTTTCGTCGAAAAATACCG
TTATTTGAGCTTAGCGCCATGAATTTCTTGAAAACTCGACGAATGAAGCC
GTCAACCTTTCTTTTCACCAGAGATTTAGGGATAGGTTCGATCAAAAACC
AAAAACCAAGAGTCAAAATCTAGGAAGATGGTAAGGTAGGAGCCCCGACG
ACCGATAAGCCCGAAACTCGTTCAAATTTCATCGTGGAAACAAAATATTT
TCCGCATTACGTGTAGCACACTAATATTTATTGATCCCCTTATTTTGGAA
TCAAATGTCGAACCTGATAACTCGCGATTGCCCGAAAAAAACAGAAAAAA
CAACAACAAAAGGCCCCGAGGATAGTTTAACTCGTGCCTACTGCAGTATA
TAAAGACTTCAAGGGAGGTCTAGAACCCCCCCACTAGCTTCTGTTTGGTC
TTATCAAGATGCAATCAACTCTAGATCACAATATTTAACATCGGTCGCAG
CTATAGTCAGTAGCGTCCTCTTTCATTATGCCAATTTACAAGAAAAATTA
ACATAATATGATTGCCAGTAAGAAAAATACAGGGAAATAGGCTGACTCTG
CTTTTTACTGCCTCTTGAACTATTTTCTCATGTTTAAAAAAACGATGAAT
TGTACAGTTTTGGGAATATATATATATATATATTACTTCAGTAACGAAGC
ATATTGAAAACCATAGAAAGGCACGACAACTTCAGCAATGACGCCCGGAT
GACGTGGTCTGGGATGTTCGACATGTCGGGGTATTGGCGGAGTATGAGCA
TTAAAGATTGTAAACTCGTCAGGCCGATACATCCATGTACGTCATTTTCT
TCGTGCACATTCATTATCATTATTCATCGTTCGGTGGGGCTTTCGGTATT
TTTTTTAATTATGGCTATTTTCCCTACTAAATACCACCTTTGTCGCAGGA
ATGTATATTGCCGAAGCTAAAAAGTATGTAGAAATGTTAGAGGTTAGTTA
CTTCGTAACGATAATCGATGCTGTGTGCTTTGTGACCAGCTGCGCTCGGG
TCTTGACTGAAACAACTGCTGTATTGTTGTTTACTTTTGGGAGTTTTCAA
GGGTTGTAGGCGCTGGTTTGGTGCGTGTGAGCATTATGAGGGGTTGGGAT
TATTTTTGGTGTTGCGGGGAGAGGGACAGGACGGAACAAATGTGGGTGGG
TGAGTAGGTAGGTGGATGGCTTTTTTTTTTAATATCTTAGTTTGTTGTTG
CGATATTCGAACGTGTGAAGCGTGGATCTGAGTGCTCACAAGCATCGAGC
GTTGCCTGTTTGACCTAAACGGCAAGTTTTCCCTGTATAGGTAGGTTCAT
TTTTCTGAGTTTTATGTATACATGTTTTTCAATGCCCCGAAACAGTCCGG
TGAGTAGGCCATGGCGACTATTATTAGATTATGGAAGGGGGAGGGGGGTT
ATGGATGAACTTCTCACTCTAAAGAGTGGTGAATAGCGGGGGGTTCTGAA
CCTCTCTGAAGCGTTGTGGACAACAGGGAGTTCCGGTGGCAGGAAACCGC
CCGCTCTGTACGCCACAGGGGATGTAAATAAAAGAATAACAAGCGGGAAG
TTCTGGCGAAACTTCACAGAATTGTAAGGGCAAACGATAGAAACGATTGT
AATCGGCCCCTTTTCGGACTAAAACGGTTACAGAAAAAAAAGACGTTTCG
GATAGCAGTGCCAGCACCCTCAAAGCAAGCAAAAACCTCCCTCCGGGGAG
GGTATATCCTTGTCGGCACCTTCCCCGACCCACCTAAAAATATTGCAGCC
TCAAAATGTCGTTTCTTCTCTCTTCATCATTACTTTCACAACTGCGGGCC
CGATCACATGGGTGACTCTTTAACTATTTCTGTCCATCTATCGACTGATT
GAACACCACCCGACGAGACAGCTTGGATTTGAGCTGTTTATGTCGAGCTT
TCGAACGGTTCAGCCGCTGTCACATCCGATATAGTCAAGACAATAGTTTT
CGCAAACGCCCTCTTGCTGAAAATTGAACGAGGAAAAAAACTGATGCAGC
TACGTCGGGAACTTGGAGGTGTTTCTGCTTTCACGCGTTTGTTCTAAAGT
ATTGAGGGAGCACATGTTTTCGATCTCACCATGGTTTTGGAAAGCATGAT
TGCAGATGTTACCTTGGTCGTTATCATTTTGACATAAATCAACTGTCCGA
CGCCGCCAAAGATACGGCCTTACCCTTTACATTACTTTTTTGTTTTATTG
TTGATTAGGTGAGGAACACGTGAAGCTTGGCTTTTTAAAATTCCATTGTT
TGAACACACGTTCACACAGCACGAGGCAATGAAGCAGCCGGTCACAACTG
GCCCCAAACAATACGAATACTCCTCCTTCGGGGTTTAGTACTTCCCTCAT
AGCTTGCCAAGGGAAAGTGATGTCATCCCCGAGCCGCCTGGTACGCCATC
ACCCCCCATGTTACCCATGTTACCCCTTTCCACCCCTTTATGTGCCTCCG
TATATTGGAGTCTGGCATCTCCCAAACGCGTGCACGGAGATGGCGCGCTT
TCACCGGGGAGTACGTAATACCCTTCTCTTGCTTTATTCCATTTTTGGAA
CAGTAATACAGCAAATTGAAAATGCTGAGTATGCCTCGTTTTTTGTTTCA
TGGTCATTTGTCATGTTTCTACATATTACTTTATTTGATATTTTTGCTAA
TATTTAAGTTTGACTTCTCTTCGTTTTTCTCCTATCACAACTGTTATAAA
GTTTTTTTTTTTGCCCAAGTCGTGTTCTGGTAGTGTAGACGCTGTCCTTC
TGGTGAAGATGTCCTTGGCAATTGACGCGTGTGGTGAAGTCGTTATGTTG
TATTACGGAGACATGTTGTTAGTAGCACCAAAGTGTTGCTCTTTCGCACG
ATGTCCCCCCGTTCAACTCGGTGCCTCTCCATAATGACGGGGTTACATCG
GAACCCGAAACTTGCGTGCACTCCACATGACTGAGACGGTTCCACATATT
TCGGTTCCGCATGTTGGATCGGTGAAAAATTGGTTCAGACTTTCTCTCCC
CGATGAAAAATAAATCCTAAGATTCTTGTGCGTGAATATACTGAACAATG
AACCTTTTTTTATATTAGTTTTTTCGAGATTGTGCGTCATAGCCGGATTC
AGTTTGACGTATCTCCACAATCACGGAATTAAATCGAAAACCGAAAGGTC
GGTGCACACCGAATGATCGAGACGGTTCCACACAAATCGGCTCCGCAAGT
TGGGTAAGTGGAACGGGGTCACACTCGCGCCCCCTCAGTAGCGTAATAAT
TTGGTCCTCTTAGCAATGTGCCTCCGTAGTAGTCATGTCCCTTTTCGTCG
TCAACCGCGCGCGAGGGACTGAAAAACGCCCCGTTATCGGGGATAACACC
GTAAATATTTTCCGTGCTTGTGTTTTTACGTACTACAGTAAGCTACAACA
ACCAGTGGAAAAATATCAAATCCACCCTGTGTGTCCTGGCTGTGCATTCC
CATCTTATGTGCATTTCCATATATTCAAATAAACATCGAGGTAACGTCTT
TTATACCGTGTGTTTCCGAACCATGCACTGTATAGTGAGGTCAAGACTAG
AAGGAACGCTTGTGCGCGAAGTGTTTTTTCATGCCCCATGTTGCCGGATA
TTATACGCGTGAATCATGAAACAGGTCGATGCTGGTGCTGTGCCTGTGCT
ACCTGGTGGTGACGAGCGTGGCTGTGAGCGTATGTCTCGGACTGGGCAAC
GTAAAGTTCTTTTTCTCCAGTGTCGCCTTTATGCTCTTCTGCGCGTACAG
GTAATAATGTTGTACCTTTTGTTTTGGCTCGACACATATTAATATTAGAT
CCATGAACGACCGCCATCTGGACGAGTACATTTACTCCCTCTGTCCCGAA
AGTCTGTTCCGTTAGCTATTTACCGCATATCTATCTCTTCAGGATGGTGT
CATATTTCAAAAATGGATTGTTGGGTTGGATTCCGTGACGTTTTTCACGT
ATAAGAACGTCTTGTTCTGAATAATTTTTCCGGAAATTTTTCCGAAAAAA
TTAATCGTACTTTTCGACCTTTGCGTCACTCGGGACTGGTTTTTCGGCTC
ATTTTAAGTGGTTCAGCAGTACGCTGTGGTCGCCCACCACTTTCACAACC
TCATTCCTTGGTCCCGGAACCCCAGAAGCGCTACCAATATTTACACCTGT
CCAAGAGACCTGATGGCGAGCTCTCAGAGCCCGTCCATCGGGAGCGAATC
TCCATCAGCTGGTGGGAGCTATTCATCTCGTCGCAGTGGCGACAATTGCG
AACTGAGCGAGGAGGGCCGCAACGCGCTTGCTCTGCGATACGCGCTGGCT
CTCCCTCCCAGCAAAGTGAGGCTCCCAGCCGGGGTCGGGCCGAGGTTGGC
TGAAGAATTCGCGGTCACCGAGAGGTACCCGCGGTTGCTATGGGCGCGCG
GTAAAAAACAACTCGACGAAGGGAATGTGGTCTCTCTGAACACAGGGGAA
ACCTGGCCAACCGTCGGACTTTTCGCCCCGGAAACAGGACAAGATCCGAG
AAATCAACGCCGCAAATCGCACGCTGACGCTGGACCAACTATCCGCCAAG
CTTGCCGAGGTCGGTCTTACCGTCGGCAGCAGCAAGCTTACTCACTGGCT
CAAACTCATGGGGGCAACGAGGGTTCAGCGACGGATAACCCCCTCGCTAT
ATTTCCATCACAAAAAAAAAACGCGTAGACTTCATCCTCGACCACATTTC
CCGCAATCGCAGAACGTTCACGACAGGCTTCAACACAATCCACATTGACG
AGGCGTGGTTCTACCTCATTCGCGAAAAGGAAAAGGTGCGAATGTTCCCC
AGGGAAGAAAAAGTTGGCTCGATCAAGGTGCAGCTCAAGAGTCACATCCC
CAAAGTGATGTTTATCTGCGCCGTTTCGCGCCCCGATCCTGAACACGACT
TCTACAGAAAGATCGGAATTTGGCGCGTCTGCACCGTGAGAGAGGCACAA
AGGACTACGGCACCGCGCGCTAGGGGGCGACAAGTATGAGGTCGACGTCA
CCATCGATGCACAATGGTACCGGGAGTGGTACGTCAACGACCTCTTGCCG
AAGGCTAAGAAGATATGGTGGCTCGAGGGGAGAGAAGGTTATCGCGCAAC
AAGACGGCGGGACGCCCGACACGAGCAAGGGTACGCCACAGGCCTTAAAC
AATGCGGGGATGGAGGGGGCGTGGAGTGTGAAGCTCGTAACGCAGACTGC
GCAATCGCCGGATCTCAACATCAACGGTTTGGGAATTGTTGCGTCTCTGA
ATAGTAGGGTATGGGGAGGGCGTTACGGCGCGGTCGATGACCTTGTAGAT
GGATTGAATAGCATGTACGACGTCTACGATGTAGACAGGTTAGAGAGAGT
ATGGAAAAGTCTGTTCAAGAGGTACAATCAGGTTTTTCGAGCCAAGGGAG
GGAACGATTTCGAGGTAGAGCACACAGGCACAAAAAAGAGGCAACGGGAA
GAAGGGTTAGTACAAGCCGTCCAGGTGGACAAAGCTTCCGCCACGGCGGC
ACTCAACTGGTCGCTTGATGGTGTTGACAAAGAATAATCCGACAGTCTAT
TTAGACGGGAAAAACGTGAAGGAATTCAGCGCGACAATCCGTTTTGAAAT
CGGAGATCATCCTGAAGAGTTATGCGGTAAATAGCTAGCGGAACAGACTT
ATGGGACAGAGGGAGCACACACACACACACAGAGACGGACTCTACTGTGG
CACACGATTGACTCGACGATGATAAAGCGCGTAATGCCTACCGTTTCAAT
GGGGGTAGGAGATAGCAGGCGAGTGGCCGCAATGTGGTGTCGTTATAATC
CCAATGAGCACTTGCGTGGAGGTCTTCCGAGTGCTTCGTGGCATAGCAAT
AAGTCTCTAACTTTTTTTTTTTTCTTTTTTTTACAGCACTGTGATTCAGA
TAGAAGATAGTTACTGTACTTGCTGCTCATGTTTTCATTGTTGTATGCTT
AGCGGAAAACAAATGAAAGGTGATAAAGCGGGGCGTCCGTCGGCTTGTGC
GCCGGTTCGTCCACGACGTTAGTTTTGGTTGAAATGTACGGTTGTGTTTC
ATTTCTCCATCCTCAAAACCGCCACGAACGTGCCTTGATCTGTTGGTGCA
AAATTTCTTGGAAAATGTTCCTCGTTAGTAGGTCTCCCATGTTTCTGCTT
TTTGCTTTTTCCCGGCGTCGCGGTGCTGGGTTACTGTCGTGCCCGTATGC
ATATTTCCCCATCGAGATAGCCCTCTCTCTTCACAACCTTACCTCACTGC
CCGGATTATCATATTTGATCCATTGGAGTTGGCATGTCCACTTATTCATA
AGAATAGAAAGATCCCCCCCACCCTCCCACCCCCGTCCCCATGGTAGTGT
TTTCCCCTCACTGTCTGTGGAAAAATATACGGTAATTGGTGGTGCTGTGG
TGTACTGCCCGGCCCCCTAAAAATTCCCGGCTCCAGGTTCGTTGTCGTGC
GGTGATACGCAGCGTTTGGACGTTTTTAGACGCAACCGGGGTCCAATTTG
CCTCTGGTTAAGTCGGGCATATAAGCTTGAAAGGTTATGGCTTGGTGTGG
TCCCCAGCTTTGCCTGACTCGCCGGGTCACCAAAACAAATAAACCACGGT
TATGTGTGTGTGTATATATATATATATATATATAATTTTTTACCCCCCAG
GTAAATACGAATACTTGGCGTATTCGCCACGAAAATGAAAAAAGTATTTT
CCTGAGTTTCAAAATGGGCCGACATATAAAACAAAGTGCACACCCCTGTC
CAAATGATTTACGACTATTATTTGCAGTCGTGGATGGTCCGGGGCACATA
GAATACACGTGCTCATTCTGACACGCAGGCGAATACTTTGTAGTTTTCGT
GGCGAATACGCTCAAGTATTCGTATTTGTCTGGGGTGGTGGTATATTTTG
ACCCACGGCGGTAAATATACTTCCCTCTAGTTTGACCAGTTTGTGTGTGA
ACAAGTAATTCAGCGACTTGAAGATGCTGAGTATACCCCCTCCTCCCCTC
CCTCCTTCCCCTCTTCCACAGCATTGCTGCTCTTCTCTTACTCGGCTCGT
GCTTCCTCGTGTTGGGATGTCTCCTTCAGCGACGCATCTGCCGCGTCCTT
GTGACTGGCAGCTGCACTCCGCGGCTGACGGCAAGGGTAGTGCGTTTGAA
CGTGGTGAGTCTTGAGTAACTCCTCCCCCCCGTTGATACTGTCTATTGCG
CTGTCCATGCGACGTCAAATGTGCGGGAGACGTGAGTCTACGGGGGCGGT
TTTGATGATGGGCGTTCACACAGTAATTCTGGATGAAATCCCAAAGATAC
CACACGCACAGAGCAAGAGCCCTCAGTTGTATAGGATCACTATTTAGAGA
AAGCAGGTATCGTGAGTGCATTATTTTTTACGTCCATGCCGCAGTGTCCT
GTGTATTGAGCATGCCGGGGGATACCGTCTTTTAATTTATTCAATTCCGA
TTTTCTCGAAAGCCTATCTCTCCGCGCCCTCGTGGCGGCAGAAGGTGTGC
CGGTGGATGGAAATTCCTCTGTATGATGTATGTCATTCGGTAGATAGGCC
CTTTTTAATAACAGTGCAGACTTATTTTAACAGGAACTCGAGTTTAACAA
ACATATATTAATCGCCCAGGGTGCTGGGTCACTGCAAACCATGTACAGTT
TGTGTGAAAGCGTTATTAGTTAGTTAAACTCACGTACGTCTGATCTATCG
GAATTTACTAGCCATGCCAGCCTCGGGGGGGAGTTGTGCACGATATTATT
TGGTTCACACGCGACACAACGGACGTTTTTTTTTTTTTGTATGTAGCCTC
AGAGGCGGCAACTGCATAGACGGAAGATCGTCCTAGATAAGGACCCGACA
TGTCAACGACGGGGAAAACCATCACTTTTTGCTTTCTTCGCCGCTGCAGG
TTATGCTGGCGTGCTTCGTTTGCTTCACTCTGCGAGCGTTCATGTTGGCA
GCCCTGGTGCAAGTTCAGGCTGAAGGGGAGGAAGATCGCAAACCCGGCAT
GGGCTGGAAGAAGTGAGTGTGGGCTACTTTTCCCCCGTCCCGATCGCTCC
GTCCTCCCGAGGAGGCGTGGTCAATGGTTTAACGATAATAACTACGGCAT
GCAAAATATGAGTCCGCCCCCCCTCCCTCCCCCTTCTCGGGGAACCGGAT
CTCGTAACGAATACGAACAAACAGGATATTAATATTTTGCGTGAAACATC
CACTCCTCAAAAGCGGACAAACACGTGTACACATCGCCGATGTTTGATCC
TAAATAGCCCTAGAGAGCTGGCTGGTAAGGTAATGGATGACCTGTCTTAT
CGAGAGGTTTTCAACAGCAGTGCAATTGGGCAATAACACACCGAGTTCTC
TCTCACGTACCTCTGGTATAGCTTAGATAATAACCGACGTATAGGAGTGT
TTCAAAGGTTCTTGGTGTGCAGCACTGAAGCGCCGTAGTGTCCCTCTTTG
ATTCAATTTTGGTGATGAGTGTATACAGCTAAATATTGAGGTTAGCTATA
TCAGCATCTCCCCCCGCTCCCCCCTGCTCCATTTTTCGTTTTTCCAGGAG
TAGCACAATTCTGCCGCGACTCCAAACCTTTAACCAGTTCCCTTCTGGCC
ACCATCCAGAGAACTGTTCAATTCAAGTATACTGTAAGCAAAAGAAGATG
TTGAAATGGACTGCGTCGAGTTTTTGACGCAAGACCCCAAATATTATAGT
TTGTTCGCAATTTTGTCCTGGGTTTTCAACAACAGGTGGGAGTGGGATAT
GAGAATGGAATGGGCACCACATGTCATACCATGTATTGCCATGCTCTACC
TCATGCGAAATGCCGGAGAGCCGCCAAGTGGTGAATCCGTCGAAGGTAAC
GAGACAACGGAGTTTGGCGGGGGAGGGGAATGGGGAGGGGAATGGGGAGG
CCGAAGTTTCTCGAGCAGTCGTCCGGATGGAAAGGAGCCTTCTCTGACCC
ATTACGGTAGGTCATGGGTTTCGTGCCCTGTGGTACCCGAACCACCTTTT
CCGTACAAAAATTCCTCTATCCGCTCCTCCCGGATATGAAGGTTTTCTGT
CCCCATCCAATTGGACGTATTTAGAATATTTTGACAGTCTGGAAGATCAG
CTTTTTCGTGATCGATTTTTTTGCGTGCGTTTCAAAAGTAATATTCCAAA
TTGCAGTTTATAATCTTGCTATTTCTTGATTGCACTCACGCATCATGCAC
ATACCACGTTTGTATTGCTGTTACACTGCTCAAATGACAAAACAGGGTTG
ACGGGAGCATGATGCGAGAGATACAGGTATACGGGTCAACCGAGGCTAAC
ACGAATTCGAGGGTCGAGGAACGGCGGGTCAAGGGGATGGCCGGCAAGGT
TTCCCTCCTCGTGATTTAGATGACTGTCCGGGCTCTCTTTTTTGCCATGC
GCCCACTGCTGTGTGGAGGTTTATACCCTATGGCTGCACCGCTACCTGAA
AGGAATGGCCCCGGCGTTGAAGCCTCGATTTTGATGTTAGCTGTTCTAAT
AGCCTTTGGCATCACTATTGTAAACGTCTGTAAACATTTTAGCATAACTA
CATAGAGGGTTTTATGTCGCGCGGGGGTGGTTGCCTCGGCCGGCTCTAGG
ATTTCGCCGCGTGTAGCTGAAAGGAAGGAGGAAGAAGGGGTGGGGGGCGT
CGATCTGCCTGATCGTGCGCGCGACTCATGTGACATGACGGGGATCTAAA
ATTCTGTCGAAGCATAGCGGAGACGCCAGCACGATTCGATCGGTTCTTTT
GGACGTGGGCTGGAGTGAAGGTTGGAGGGACGTGCTTCGCGTTGAAGGCG
ATTTTTGTAGTGTGAGGTAAAAGGACAAGACCAAGTACTGATGAAACATC
AATGCCAGCGTTGTCGTCGGTATTGACGAGGGCTTTAGTTTTTTTTCTCG
ATTCTTGTTGCCCTCGAGTCAAAAGCTGAAAAGATCCGTCCAATCTCGTT
TCAAAGCGGAGCAAGTGGAGTAAGTTCAGCTCCCCAGGTATATTGACATC
TTGTAGTGCGTACCAAGGAAAAGAAGGAAGGCGACGATGGACACGCGTGC
TGACCTAAAATTGTGGTAATGATGACGCGTGATCGGAGTTGTGTGCTGGC
GATGCATGCAGGTACTCGGAGCGTTGCCCTCAGGTAGCTTGTGTCGTGAG
AGGTCCGAAACCCTTTCCTGTCTGGTGTCTAGGTAGCAAGGCAAATTCAT
TGTTCCAAGGTTGGGGGGAGCAGAGTGGAGTAGTAACGGTATGGAAAATG
GGGGCATATTTTACATAGTGTAGCCATATGCTGTGACCTTGTTGTAGTTT
CTTCTGTGGTGTATGTATGTGTGACTTGCTGGGCGTACGCTCTGTAGTAG
GTGAATGGCACCGAAAGCGAGCAGCACTAGATTGATTCGTTGTGGTTTGC
GACGGTAATTGGCATGCCCATAGGCTGCCGTTTATTTGTTCCTTCTTTGT
TCTGTTGCTCGTTTGTTACTGTTGGTTGTGCAAATTTTTATTAGTCAGGG
GTTGATGTATCGAAAACAGCTGGTGCGCCCAAGAGAGACTCCTTCAAATG
TCGAGCGTACGACAGACACCGTCCGTGAAGGCACATGAGTTCAAGTGGCC
CATGACTTGTTCAAGGGGAACTTGGAGGCTTTGTTTTGTACAAGTACCAC
GCGTAAAACCTTGGTTTGACGGCACTCGTGTCGATCGTTTTCACCGTTAT
CATTGTTATTTTTTGTCAGATAGTAGGTGCTCGTACTTGCTGTCAGTACT
TTATTGTGAACGACATGTTTTTTTTTACAGTAGGTTTCAGAGTGGAACAC
CCCTTCCCCTCGCCCCCCCCGCCCCCGTCCCCCCCCATCTGAGCGGGTTT
TCGGTATTATTTGTTGACGAGGGTAAATTCAATTTGCCGAGTGGTATTAT
TGATTTCATTTCTTGGGCAAACTCGTTCAAGAAGTATACGCTTCGGTAGC
TGAGTTGTGGTGCTTTACTTGGTCTAAAATGTGCAATCGTCTCTTGATTT
ATTTACTTATTTATTTCTCGATTTTTGGGGGCTATTTGGTACATCAAGTA
GTGGTGAAATTCCGACGTCTATGAGAACCAATCAGCGGCGACCAGCATTT
TGTATAGTAGATACGACCGTAGGTGCCACGTTGTTCGCGTTGTGTTGCAG
GCAAGTCAGAATATATATATATATAGTCAATGACATTTTCGCACAGTCAA
CGGTAATGAGCAAGTTATACTCGTAACGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig221:22646..35424- >mRNA_H-paniculata_contig221.5849.1 ID=mRNA_H-paniculata_contig221.5849.1|Name=mRNA_H-paniculata_contig221.5849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2112bp|location=Sequence derived from alignment at H-paniculata_contig221:22646..35424- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGAGCGACACTTGCTGTTGGCGGGCTTGTTCACCGTGTGTGCTGT
GTCCACGGTTGCTTTGGCACGTCTCCTCATCGTGCTGAGGATATTCAGGC
GTCGCCAGCAACGATGGTCAGAGCCGTCAATAAATCAATACTCCACGATA
TACAGCAACAGCAACGCGCACACGGCGACAACGAACATGGGCAGGGGCAG
CAATGGAAGAGCGACACTTGCTGTTGGCGGGCTTGTTCACCGTGTGTGCT
GTGTCCACGGTTGCTTTGGCACGTCTCCTCATCGTGCTGAGGATATTCAG
GCGTCGCCAGCAACGATGGTCAGAGCCGTCAATAAATCAATACTCCACGA
TATACAGCAACAGCAACGCGCACACGGCGACAACGAACATGGGCAGGGGC
AGCAAGTCTCGGATTCTATTGCCCTCGCTACTATTTCACGTCCTCCTGTT
TCTTTGCCTCGTGACGGAGGTTCCTGTGTACGCGGTGCGCTACGTGTCGA
CGCTGCACAGCTCGGGAGTCGGGCGACCTCTGTACGCGTTGCATCTATGC
AGTTACTTGTTGCTGTTCTGTGCCTTCTGCGTGATCGTTACCCTTTGGAG
CGACGTCGCCGTGTTCGAGCCCAACGAATGGACTGCACTGATGAATAGAG
TCTCGGATTCTATTGCCCTCGCTACTATTTCACGTCCTCCTGTTTCTTTG
CCTCGTGACGGAGGTTCCTGTGTACGCGGTGCGCTACGTGTCGACGCTGC
ACAGCTCGGGAGTCGGGCGACCTCTGTACGCGTTGCATCTATGCAGTTAC
TTGTTGCTGTTCTGTGCCTTCTGCGTGATCGTTACCCTTTGGAGCGACGT
CGCCGTGTTCGAGCCCAACGAATGGACTGCACTGATGAATAGGTCGATGC
TGGTGCTGTGCCTGTGCTACCTGGTGGTGACGAGCGTGGCTGTGAGCGTA
TGTCTCGGACTGGGCAACGTAAAGTTCTTTTTCTCCAGTGTCGCCTTTAT
GCTCTTCTGCGCGTACAGGTCGATGCTGGTGCTGTGCCTGTGCTACCTGG
TGGTGACGAGCGTGGCTGTGAGCGTATGTCTCGGACTGGGCAACGTAAAG
TTCTTTTTCTCCAGTGTCGCCTTTATGCTCTTCTGCGCGTACAGCATTGC
TGCTCTTCTCTTACTCGGCTCGTGCTTCCTCGTGTTGGGATGTCTCCTTC
AGCGACGCATCTGCCGCGTCCTTGTGACTGGCAGCTGCACTCCGCGGCTG
ACGGCAAGGGTAGTGCGTTTGAACGTGCATTGCTGCTCTTCTCTTACTCG
GCTCGTGCTTCCTCGTGTTGGGATGTCTCCTTCAGCGACGCATCTGCCGC
GTCCTTGTGACTGGCAGCTGCACTCCGCGGCTGACGGCAAGGGTAGTGCG
TTTGAACGTGGTTATGCTGGCGTGCTTCGTTTGCTTCACTCTGCGAGCGT
TCATGTTGGCAGCCCTGGTGCAAGTTCAGGCTGAAGGGGAGGAAGATCGC
AAACCCGGCATGGGCTGGAAGAAGTTATGCTGGCGTGCTTCGTTTGCTTC
ACTCTGCGAGCGTTCATGTTGGCAGCCCTGGTGCAAGTTCAGGCTGAAGG
GGAGGAAGATCGCAAACCCGGCATGGGCTGGAAGAAGTGGGAGTGGGATA
TGAGAATGGAATGGGCACCACATGTCATACCATGTATTGCCATGCTCTAC
CTCATGCGAAATGCCGGAGAGCCGCCAAGTGGTGAATCCGTCGAAGGTAA
CGAGACAACGGAGTTTGGCGGGGGAGGGGAATGGGGAGGGGAATGGGGAG
GCCGAAGTTTCTCGAGCAGTCGTCCGGATGGAAAGGAGCCTTCTCTGACC
CATTACGGTGGGAGTGGGATATGAGAATGGAATGGGCACCACATGTCATA
CCATGTATTGCCATGCTCTACCTCATGCGAAATGCCGGAGAGCCGCCAAG
TGGTGAATCCGTCGAAGGTAACGAGACAACGGAGTTTGGCGGGGGAGGGG
AATGGGGAGGGGAATGGGGAGGCCGAAGTTTCTCGAGCAGTCGTCCGGAT
GGAAAGGAGCCTTCTCTGACCCATTACGGGTTGACGGGAGCATGAGGTTG
ACGGGAGCATGA back to top
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