prot_H-paniculata_contig221.5849.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig221.5849.1
Unique Nameprot_H-paniculata_contig221.5849.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length352
Homology
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: D8LN17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN17_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 1.090e-114
Identity = 198/338 (58.58%), Postives = 236/338 (69.82%), Query Frame = 0
Query:    1 MEERHLLLAGLFTVCAVSTVALARLLIVLRIFR---RRQQRWSEPSINQYSTIYSNSNAHTATTNMGRGSKSRILLPSLLFHVLLFLCLVTEVPVYAVRYVSTLHSSGVG-------RPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEPNEWTALMNRSMLVLCLCYLVVTSVAVSVCLGLGNVKFFFSSVAFMLFCAYSIAALLLLGSCFLVLGCLLQRRICRVLVTGSCTPRLTARVVRLNVVMLACFVCFTLRAFMLAALVQVQAEGEEDRKPGMGWKKWEWDMRMEWAPHVIPCIAMLYLMRNAGEP----------PSGESVEGNETTEFGG 318
            M E   LLAGL  VCA                    ++QQ ++  ++ Q          H   T+  R + SR+++PSLLFHVL+FLCL  EVPVYA R++S   SSG+        R LYALH+ SYLLLF AF V+VTLW+DVAVFEPNE TALMNRSM+ LC+CY++VT +AVSVCLG+GNVK+F SS AF+LFCAYSIA LLLLG+ FLVLGCLLQ+RICRVLVTGSCT RLTAR+VRLNVVMLACF CFT+RA MLA L+Q QAEGEE      GWK+ E DMR+EWA HVIPC+AMLYLMR AGEP          P+G+   G+E+T F G
Sbjct:    1 MREEQALLAGLVAVCAXXXXXXXXXXXXXXXXXXXXQQQQSFTNGNLGQEEE-----RRHLQATDADRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLS---SSGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCLGVGNVKYFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGKEYGGDESTGFSG 330          
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: A0A836C8B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B0_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.520e-59
Identity = 139/346 (40.17%), Postives = 187/346 (54.05%), Query Frame = 0
Query:    1 MEERHLLLAGLFTVCAVSTVALARLLIVLR-IFRRRQQR--WSEPSINQYSTIYSNSNAHTATTNMGRGSKSRILLPSLLFHVLLFLCLVTEVPVYAVRYVSTLH---SSGVGRPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEPNEWTALMNRSMLVLCLCYLVVTSVAVSVCL-GLGNVKFFFSSVAFMLFCAYSIAALLLLGSCFLVLGCLLQRRICRVL------------------------------------------VTGSCTPRLTARVVRLNVVMLACFVCFTLRAFMLAALVQVQAEGEEDRKPGMGWKKWEWDMRMEWAPHVIPCIAMLYLMR 297
            + +    LAGL T    + +A  RLL+VLR ++R    R   +EP              H AT +     +  +L    +FHVL+FLCL  EVPVYA  YV+      S  VGR LYALHL SYLLL  AFC+IV LWS VA FEP+ W  L NR +LVLC+ Y +VT+VAV  CL    + + +F+S+ F+ FCA+SI ALLLL +CFLVLGCL+Q+RIC  L                                                  LT  V+RLN V+L CFVCF+ RA +L  L++++  G +      GW +W+ ++ +EW P+V+PC+A+LYLMR
Sbjct:    2 LSDPQCALAGLVTTALAAAIAAWRLLVVLRQVWRYGGWRRVLAEPFSKDAYEDLDRQPHHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFEVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALG---GWTRWQQEVYVEWIPNVVPCLALLYLMR 344          
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: A0A7S3XM64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM64_HETAK)

HSP 1 Score: 120 bits (301), Expect = 1.210e-27
Identity = 79/239 (33.05%), Postives = 124/239 (51.88%), Query Frame = 0
Query:   76 LLFHVLLFLCLVTEVPVYAVRYVSTLH-----SSGVGRPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEP-NEWTALMNRSMLVLCLCYLVVTSVAVSVCLGLGNVKFFFSSVAFMLFCAYSIAALLLLGSCFLVLGCLLQRRICRVLVTGSC-TPRLTARVVRLNVVMLACFVCFTLRAFMLAALVQVQAEGEEDRKPGMG-----WKKWEWDMRMEWAPHVIPCIAMLYLMRNAGEP 302
            LLFH L+ L L+ ++P+Y    ++        S      LY +++ SY LLFCAFC+++ LW+ + +F   + W  ++ RS++ +C+ Y + +  A   C+   ++  +  S  ++LF    I  L  L   FL++GC+LQ RICR L       PR  A V RLN V+  C + F +RA +L A +   A   +   P             W +  EW PH+ PCIA++YL+RNA  P
Sbjct:   69 LLFHQLILLSLMLQIPLYVCYAIAGSQGEEDSSERYFEYLYPVNIMSYWLLFCAFCLVINLWASLVIFNTGSRWILVLRRSLVAICILYALASMYACLDCIFSSSLWSWLESGTYVLFDFCCIGVLTFLSGAFLIVGCMLQGRICRALAPQERGRPRFWATVARLNGVIFVCTISFAMRAALLLASLAAGAPYADTVSPAAAAPPAALSVETWLVLAEWVPHLAPCIALMYLLRNASGP 307          
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: A0A7S2RT50_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT50_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.180e-19
Identity = 78/240 (32.50%), Postives = 120/240 (50.00%), Query Frame = 0
Query:   83 FLCLVTEVPVYAVRYVSTLHSSGVGRPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEPNEWTALMNRSMLVLCL-CYLVVTSVAVSVCLGLGNVKFFFSSVAFMLFCAYSIAALLLLGSCFLVLGCLLQRRICRVLVTGSCT---PRLTARVVRLNVVMLACFVCFTLRAFMLAALVQVQAEGEEDRKPGM-----GWKKWEWDMRMEWAPHVIPCIAMLYLMRNAGE--PPSGESVEGN 311
            FL L  ++P YA  Y   +  +     ++ LH+ S  LL+CAFC+ + +   +  F   E      R +LV  +  ++ + S  V  C+G  +   F ++  F LF  Y++   LL+ + FLV G LLQRR+  VL     T   P     + RLN V L C VCF +RA MLA +  +        +PG+     G+  WEW M  +W    +PC+A+LYL R+A +  PP+    +G+
Sbjct:    1 FLALAVDIPFYANGY--HVLDNPWSSTVFPLHVLSVFLLYCAFCIFLNI---LVKFVHLERRMKCLRWLLVATIIAFVPIASAVVVDCIGTDSFSEFVAATPFSLFIWYTVGVHLLIAAMFLVAGILLQRRVWNVLGPQRDTHPDPNFWMMLCRLNFVTLCCTVCFLVRAVMLARVAIIS------NRPGLLQTELGFGTWEWLMYEQWITTTVPCLALLYLWRDAAKAGPPALSRADGD 229          
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Match: A0A6H5KRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT8_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 2.420e-6
Identity = 28/50 (56.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:  278 MRMEWAPHVIPCIAMLYLMRNAGEPPS---------GESVEGNETTEFGG 318
            M +EWA HVIPC+AMLYLMR AGEP S         G+   GNE T F G
Sbjct:    1 MMLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTAGKDYGGNERTGFTG 50          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig221.5849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LN17_ECTSI1.090e-11458.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8B0_9STRA5.520e-5940.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XM64_HETAK1.210e-2733.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RT50_9STRA4.180e-1932.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5KRT8_9PHAE2.420e-656.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 174..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 256..351
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 230..255
NoneNo IPR availableTMHMMTMhelixcoord: 6..28
NoneNo IPR availableTMHMMTMhelixcoord: 187..209
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 152..174
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig221contigH-paniculata_contig221:24613..35424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig221.5849.1mRNA_H-paniculata_contig221.5849.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig221 22646..35424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig221.5849.1 ID=prot_H-paniculata_contig221.5849.1|Name=mRNA_H-paniculata_contig221.5849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp
MEERHLLLAGLFTVCAVSTVALARLLIVLRIFRRRQQRWSEPSINQYSTI
YSNSNAHTATTNMGRGSKSRILLPSLLFHVLLFLCLVTEVPVYAVRYVST
LHSSGVGRPLYALHLCSYLLLFCAFCVIVTLWSDVAVFEPNEWTALMNRS
MLVLCLCYLVVTSVAVSVCLGLGNVKFFFSSVAFMLFCAYSIAALLLLGS
CFLVLGCLLQRRICRVLVTGSCTPRLTARVVRLNVVMLACFVCFTLRAFM
LAALVQVQAEGEEDRKPGMGWKKWEWDMRMEWAPHVIPCIAMLYLMRNAG
EPPSGESVEGNETTEFGGGGEWGGEWGGRSFSSSRPDGKEPSLTHYGLTG
A*
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