prot_H-paniculata_contig220.5817.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig220.5817.1
Unique Nameprot_H-paniculata_contig220.5817.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length263
Homology
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A699K670_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699K670_TANCI)

HSP 1 Score: 157 bits (396), Expect = 4.250e-42
Identity = 98/265 (36.98%), Postives = 154/265 (58.11%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESED--PGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSETPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGR-REKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT 262
            +++E G+++EN TW   D  PG  P G    K IFK+K+K DG++  +K RLV Q F   EG D+F+T APVAR++T  ++ +LA  H+  +  MDV   +LN   DEE+++K   +   L   C+Y S+ +     + + +YVDD+VI G  + +VD+ K  +S RF MKD+G    +LGI+++R+  N+ I I+Q  YI ++LK++  ++C  V TP++   K+       KP   KP+     +  EY   +G LMY  T T
Sbjct:  112 IDDEIGSIMENNTWVLSDLPPGCKPLG---CKWIFKRKMKVDGAIDTFKARLVIQCFRQKEGIDYFDTYAPVARITTTRLLLALAAIHNPVIHQMDVKTTFLNGDLDEEVYMK---QRKDLLCQCVY-SKFDNFGKGVIICLYVDDMVIFGTDQNQVDKTKKFLSSRFSMKDMGEADVILGIKIKRE--NKGIVITQSHYIEKILKKFNREDCSSVSTPMDPVNKL-------KPNTWKPV-----DQLEYSRAIGCLMYAMTST 355          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU)

HSP 1 Score: 153 bits (387), Expect = 1.350e-38
Identity = 108/305 (35.41%), Postives = 158/305 (51.80%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPGRLPAG--RIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSETP-------------------------TL-------------TNPCLYFSRDEGEDTDIRVAVYVDDLVIAGR-REKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVL--GNSTEYRSMVGSLMYTSTGT 262
            +EEE   L +N  +E+     +P+G   I +K + + K  ++G +  YK+R+VA+GF+   G D+ +  APVA + ++ I+ +LA  +D+EL+ MDV AAYLN   DEEL++  P                             TL             +  CLY  RD+       V VYVDDL++A   R  +DE K K++ +F+M+DLG  S +LGI +RRDRP R I +SQ  YI  VL RYG  +C+   TP+    K     SAD P +   L ++   G S  Y S++GS+MY   GT
Sbjct: 1002 LEEELQNLRDNCVYETVP---IPSGVKPITSKPVLRVKFDKNGGIERYKIRIVARGFTQKPGIDYQDVFAPVANLESVRIILALAARYDLELDQMDVSAAYLNGELDEELYLMPPDGVAIEPGHCWRLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVK----PSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGT 1298          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A177T2I3_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T2I3_9BASI)

HSP 1 Score: 152 bits (384), Expect = 3.340e-38
Identity = 103/300 (34.33%), Postives = 152/300 (50.67%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPGRLPAGR--IRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSETPTLTNP------CLYFSRDEGED--------------------------TD---IRVAVYVDDLVIAGRR-EKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT 262
            +++E G+L E GT+E  +    P G   +  K +FK K   DGSV+ YK R VA+G++ VEG D+ ET AP ARM+T+  + ++A   D+EL   D D AYLN P   ++++  P  T +           LY  +  G +                          TD   + + VYVDDL+IA  +   + E K +++QRF+ KDLG    +LGIE+RRDR  + +T+SQ  Y REVL R+G   C+    P++ K  +           P+  G    +   YR++VGSLMY   GT
Sbjct:  853 IQKELGSLEETGTYEWVE---APEGANILTGKWVFKIKRNPDGSVSKYKARFVARGYAQVEGVDYDETHAPTARMATVRAICAIAACDDLELSQFDYDTAYLNGPLHAKVYMHPPEGTESRPGKVWRLIKALYGLKQAGREWNLVLVELLTDLGFKQSKTDASLFVRTDPSFVAIIVYVDDLIIAAAKGTDMGELKRQLAQRFKGKDLGEAHHLLGIEIRRDREKKILTMSQGRYAREVLARFGMSNCKPAKLPMQSKISLM----------PRREGEPAADKATYRAIVGSLMYLVMGT 1139          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A535EWW2_9CHLR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535EWW2_9CHLR)

HSP 1 Score: 149 bits (375), Expect = 3.530e-38
Identity = 103/298 (34.56%), Postives = 151/298 (50.67%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPGRLPAGR--IRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSETPTL-------TNPCLY---------------FSRDEG-----------EDTDIRVAVYVDDLVIAG-RREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT 262
            M +E+ +L+ENGTW   DP   P GR  +R + I+K K   +G +  YK R V +GF   +G D+ ET A V +  +   +F+LA  HD+ELE MDV  A+L    +EE++V+ P E            N  LY               F +  G            +  + +AVYVDDL+I G  +E++ + K  +++ F+M DLG     LG+ +RRDRPNRTI +SQ  Y+  +LK +   E + V TP++     +A E  +  PE +           Y+S VGSLMY   GT
Sbjct:  124 MVDEYDSLMENGTWTLVDP---PPGRRILRGRWIYKIKRGPNGEILRYKARWVVRGFEQEQGLDYNETFASVVKPMSYKALFALAAAHDLELEQMDVKTAFLYGDIEEEIYVERPPEVGEKHSGKVCRLNKALYGLKQSPRVWYKTLAAFLKKSGFEPLSPDFSVFHNNGMFIAVYVDDLLIVGPSKEEIQKVKDTLNKEFQMTDLGPCQYYLGMRIRRDRPNRTIYLSQQGYLERILKDFDMWESKPVATPLDNSRFETAEEGYECKPEDR---------KRYQSAVGSLMYAMLGT 409          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 152 bits (383), Expect = 4.600e-38
Identity = 96/302 (31.79%), Postives = 157/302 (51.99%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSE----------------------------------------TPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGRREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT 262
            +E+E   L ++ T++  +P       + +K +F+ K   +G +  YK RLVAQGFS + G DF +T APVA+++++ I+ +LA  HD ++  MDV  AYLNA  +EE+F+K P                                          + +L + C+++  ++ +   + +A+ VDD  IAG    V  FK +IS+RF M DLG +  +LGIEVRRDR  RT+++SQ  YI  ++ R+  ++ + + TP+E    +S  +    P E + +      +  YR  +GSLMY + GT
Sbjct:  979 IEKEMRNLRDHHTYDLVEPPEN-TNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDM-----RNVPYREAIGSLMYAALGT 1274          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 150 bits (379), Expect = 1.580e-37
Identity = 102/286 (35.66%), Postives = 150/286 (52.45%), Query Frame = 0
Query:   15 ESEDPGRLPAGR--IRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLP------SETPTLTNPCLY----FSRD--------------EGEDTD------------IRVAVYVDDLVIAGR-REKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTG 261
            E  D    P GR  +  K +FK K   DGS+  YK RLVA+GF+ VEG D+ +T APV++ +++  V +LA  +D++++ MDV +A+LN   DEE+++  P      + +       LY     SR+              E  D D            + +A+YVDD++IAG  R  +D FK  +S+RF M DLGS   +LG+E+ RDR   T++ISQ  YI ++L+R+G   CR V TP+E   K+     A   P+P            Y+S +GSLMY   G
Sbjct: 1019 ELYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENGVILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKP------------YQSALGSLMYAMLG 1292          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO)

HSP 1 Score: 149 bits (376), Expect = 3.830e-37
Identity = 101/305 (33.11%), Postives = 156/305 (51.15%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESED--PGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPS----------------------ETP------------------TLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGR-REKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT 262
            ++ E  ++++N TW+  D  PG  P G    K IF++K+K DG+V  YK RLV QGF   EG DFF+T APVAR+ST+ ++ +LA  H++ +  MDV  A+LN   DEE+++K P                       + P                     + CLY S+ +     + + +YVDD++I G  +++VDE K  +S +F MKD+G    +LGI+++R   N  I+ISQ  YI ++L+++ F +C  V TP++   K+             P   V  +  EY   +GSLMY    T
Sbjct:  557 IQSEMDSIMQNNTWKLVDLPPGCKPLG---CKMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGNENKVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLY-SKFDTHGKGVIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIKRG--NNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLL------------PNKGVAVSQLEYSRAIGSLMYAMIST 843          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A6L2N851_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2N851_TANCI)

HSP 1 Score: 148 bits (374), Expect = 6.680e-37
Identity = 96/265 (36.23%), Postives = 147/265 (55.47%), Query Frame = 0
Query:    6 GALVENGTWESED--PGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSETPTLTNP-----CLYFSRDEGEDTDIRVAVYVDDLVIAGR-REKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT 262
            G+++EN TW   D  PG  P G    K IFK+K+K  G++  +K +LV QGF   EG D+F+T APVAR+ST+ ++ +L   H++ +  MDV   +LN+  +EE+++K P E            C+Y+  DE     + + +YVDD++I G  + +VD+ K  +S  F MK +G    +LGI ++R+  N+ +TI+Q  YI ++LK++    C  V TP+E  G  S P         KP+     N  EY   +G LMY  T T
Sbjct:  391 GSIMENNTWVLSDLPPGCKPLG---CKWIFKKKIKVRGTIDKFKAQLVIQGFRQTEGIDYFDTYAPVARISTIRLLIALVATHNLVIYQMDVKTTFLNSYLEEEIYMKKPEEFVMRVKEHKVYKCVYYKFDESG-KGVIICLYVDDMLIFGTDQNQVDKTKEFLSSNFSMKYIGEADVILGIRIKRE--NKGLTITQSHYIEKILKKFNCKGCGPVSTPMEA-GIKSMPYMG------KPV-----NQLEYLHAIGCLMYAMTST 637          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A401H6Z2_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H6Z2_9APHY)

HSP 1 Score: 147 bits (371), Expect = 1.790e-36
Identity = 94/295 (31.86%), Postives = 151/295 (51.19%), Query Frame = 0
Query:    8 LVENGTWESEDPGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFV----------------------------------KLPSE------TPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGRREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT 262
            L  +GT+   +P +     + +K +F+ K   +G +  YK RLVAQGF+ V G DF ET APVA+++++ ++ +LA  +D EL  MDV   YLN   +EE+++                                  K+  E      T +  + C+++ R+E +   + +A+ VDD  IAG +  V  FK +IS  F M DLG +  +LGIEVRRDR  RT+++SQC YI  +L R+   + + + TP++    +S  +    P + + +      +  YR  +GSLMY + GT
Sbjct:  771 LDSHGTYTLVEPPKN-TNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILTLAAHYDWELHQMDVKGVYLNGDLEEEIYMWQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCIFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISMHFEMSDLGEMHWILGIEVRRDRDARTLSLSQCAYIDMILARFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDM-----KNIPYREAIGSLMYAALGT 1059          
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A6A3B678_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B678_HIBSY)

HSP 1 Score: 147 bits (371), Expect = 1.800e-36
Identity = 89/266 (33.46%), Postives = 149/266 (56.02%), Query Frame = 0
Query:    1 MEEEWGALVENGTWESEDPGRLPAGR--IRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELF------VKLPSETPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAG-RREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMY 257
            M+EE   L +N TW   D   LP GR  I  K +FK K  +D  V  Y+ RLV +G++  EG DF E  +PV R++T+ +V ++    ++ LE +DV   +L     +         +K         +PC YF R  G++  + + +YVDD+++AG  ++ ++E K ++++ F+MKDLGS +++LG+++ RDR NR I +SQ +Y++++L R+   +C+ + TP+    K+S+  S     E   +  V      Y S VGSLM+
Sbjct:  674 MQEEIETLHKNNTW---DLVPLPQGRKPIGNKWVFKIKRNDDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATLNLHLEQLDVKTTFLMEILKKRFICSNLKDLKKKKRRTWFADPCAYFKRS-GDNDFVILLLYVDDMLVAGPNKDHIEELKAQLAREFKMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFNMQDCKSIFTPLPINFKLSSSMSPSSEKERMEMSQV-----PYASAVGSLMF 930          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A699K670_TANCI4.250e-4236.98Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A1M2VT18_TRAPU1.350e-3835.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A177T2I3_9BASI3.340e-3834.33Uncharacterized protein n=1 Tax=Tilletia indica Ta... [more]
A0A535EWW2_9CHLR3.530e-3834.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GQU1_9APHY4.600e-3831.79Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A1M2VV58_TRAPU1.580e-3735.66Retrovirus-related Pol polyprotein from transposon... [more]
A0A445HPU2_GLYSO3.830e-3733.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A6L2N851_TANCI6.680e-3736.23Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A401H6Z2_9APHY1.790e-3631.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3B678_HIBSY1.800e-3633.46Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 126..217
e-value: 1.5E-18
score: 67.4
coord: 27..114
e-value: 2.9E-18
score: 66.4
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..114
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig220contigH-paniculata_contig220:1967..2919 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig220.5817.1mRNA_H-paniculata_contig220.5817.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig220 1739..2988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig220.5817.1 ID=prot_H-paniculata_contig220.5817.1|Name=mRNA_H-paniculata_contig220.5817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MEEEWGALVENGTWESEDPGRLPAGRIRTKCIFKQKLKEDGSVACYKVRL
VAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYL
NAPGDEELFVKLPSETPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGR
REKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIRE
VLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRS
MVGSLMYTSTGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like