mRNA_H-paniculata_contig220.5817.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 214 bits (544), Expect = 4.940e-60 Identity = 135/403 (33.50%), Postives = 214/403 (53.10%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESEDPGRLPAGRIRTKC--IFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSE----------------------------------------TPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGRR-EKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGK-ISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
EP + +EAL GP A + M++E +L E+ WE + LP R C +FK K DGS+ +K RLVAQGFS G D+ ET +PV R ++ V +L+V+ ++L MDV AA+LN ++E+++K P T T ++PC+Y ++G VA++VDD+++AG+ EK+ + K I++RF++KD+G L +LG++V ++ + + I Q Y ++K+YG + C+ V TPV+ K +SA E ++ L N E++S VGSL+Y S+ T PDI + V+ A +P E ++ KRIFRYL ++G+ + +N + GF DADW D+ DR S +GY F++
Sbjct: 145 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSE-----------LFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQI 528
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 215 bits (548), Expect = 9.440e-59 Identity = 136/403 (33.75%), Postives = 214/403 (53.10%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESEDPGRLPAGRIRTKC--IFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSE----------------------------------------TPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGRR-EKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGK-ISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
EP + +EAL GP A + M++E +L E+ WE + LP R C +FK K DGS+ +K RLVAQGFS G D+ ET +PV R + V +L+V+ ++L MDV AA+LN ++E+++K P T T ++PC+Y ++G+ VA++VDD+++AG+ EK+ + K I++RF++KD+G L +LG++V ++ + + I Q Y ++K+YG + C+ V TPV+ K +SA E ++ L N EY+S VGSL+Y S+ T PDI + V+ A +P E ++ KRIFRYL ++G+ + +N + GF DADW D+ DR S +GY F++
Sbjct: 759 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSE-----------LFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQI 1142
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 213 bits (541), Expect = 8.650e-58 Identity = 134/399 (33.58%), Postives = 212/399 (53.13%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESEDPGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSE----------------------------------------TPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGRREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
EP+S EA+Q P+ + + +E+E L ++ T++ +P + +K +F+ K +G + YK RLVAQGFS + G DF +T APVA+++++ I+ +LA HD ++ MDV AYLNA +EE+F+K P + +L + C+++ ++ + + +A+ VDD IAG V FK +IS+RF M DLG + +LGIEVRRDR RT+++SQ YI ++ R+ ++ + + TP+E +S + P E + + + YR +GSLMY + GT PDIA+ V + M++P R + KR+ RYL + + +T+G NG +EGF DADW E R S GYVF +
Sbjct: 959 EPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPEN-TNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDM-----RNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNG--VEGFSDADWGSS-EHRHSICGYVFLI 1348
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 210 bits (535), Expect = 5.410e-57 Identity = 136/399 (34.09%), Postives = 210/399 (52.63%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESEDPGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSE----------------------------------------TPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGRREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
+P S EA+Q E K + + +E L +GT+ +P + + +K +F+ K +G + YK RLVAQGF+ V G DF ET APVA+++++ ++ +LA +D EL MDV AYLN +EE++++ P T + + C+++ R+E + + +A+ VDD IAG + V FK +IS RF M DLG + +LGIEVRRDR RT+++SQ YI +L R+ + + + TP++ +S + P + + + + YR +GSLMY + GT PDIAY V + M++P R + KR+FRYL+ + +TFG ++G +EGF DADW E R S +GYVF L
Sbjct: 921 DPASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKN-TNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDM-----KNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDG--VEGFSDADW-GSAEHRHSISGYVFLL 1310
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A401H6Z2_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H6Z2_9APHY) HSP 1 Score: 206 bits (524), Expect = 1.500e-55 Identity = 135/399 (33.83%), Postives = 208/399 (52.13%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESEDPGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFV----------------------------------KLPSE------TPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGRREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
+P S EA+Q E K + +E L +GT+ +P + + +K +F+ K +G + YK RLVAQGF+ V G DF ET APVA+++++ ++ +LA +D EL MDV YLN +EE+++ K+ E T + + C+++ R+E + + +A+ VDD IAG + V FK +IS F M DLG + +LGIEVRRDR RT+++SQC YI +L R+ + + + TP++ +S + P + + + + YR +GSLMY + GT PDIAY V + M++P R + KR+FRYL+ + +TFG ++G +EGF DADW E R S + YVF L
Sbjct: 744 DPASLNEAMQSTEWPKWTEAIAKEMQNLDSHGTYTLVEPPKN-TNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILTLAAHYDWELHQMDVKGVYLNGDLEEEIYMWQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCIFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISMHFEMSDLGEMHWILGIEVRRDRDARTLSLSQCAYIDMILARFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDM-----KNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMKNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDG--VEGFSDADW-GSAEHRHSISRYVFLL 1133
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 199 bits (507), Expect = 1.630e-55 Identity = 139/403 (34.49%), Postives = 207/403 (51.36%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWE--SEDPGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSETPT---------LTNPC--------------------LYFSRDE---------GEDTDIR-VAVYVDDLVIAGRREKVDEFKH---KISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
EP++ EA E + A +E+E G + + GTWE + PG A + + +FK K G++A YK RLVAQGFS + G D+ +T APVA++S++ I+ +LA D EL MDV AYLN +EE+F+K P PT L P + F+R G + +I VAV VDDL IA VDE H + +F M DLG + +LG+E++RDR RTI++ Q YI +L R+ + + + T ++ ++ +S P + + +L YR +GSLMY + GT PD++Y V + M++P + KR+ RYL + +T+GG N +G+EGF DADW + R S +GYVF +
Sbjct: 29 EPRTVDEAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPG---ANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAAN--SVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNIL-----YREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLI 419
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO) HSP 1 Score: 206 bits (523), Expect = 2.000e-55 Identity = 132/402 (32.84%), Postives = 211/402 (52.49%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESED--PGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPS----------------------ETP------------------TLTNPCLYFSRDEGEDTDIRVAVYVDDLVIAGR-REKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
+PK+ +EA+ + + ++ E ++++N TW+ D PG P G K IF++K+K DG+V YK RLV QGF EG DFF+T APVAR+ST+ ++ +LA H++ + MDV A+LN DEE+++K P + P + CLY S+ + + + +YVDD++I G +++VDE K +S +F MKD+G +LGI+++R N I+ISQ YI ++L+++ F +C V TP++ K+ P V + EY +GSLMY T PDIAY V + + +P + R+F+YL D+G+T+ G + +EG+ DA W+ ++ED +S +G+VF L
Sbjct: 537 DPKTFSEAMASRDVVFWKEAIQSEMDSIMQNNTWKLVDLPPGCKPLG---CKMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGNENKVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLY-SKFDTHGKGVIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIKRG--NNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLL------------PNKGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRVFKYLKGTIDYGLTYTGFPSV--IEGYSDASWITNMEDYSSTSGWVFLL 918
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: W8BNV5_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BNV5_CERCA) HSP 1 Score: 200 bits (509), Expect = 2.670e-55 Identity = 127/410 (30.98%), Postives = 211/410 (51.46%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESEDPGRLPAGR--IRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSE------------------------------------------------TPTLTNPCLYFSRDEGEDTDIRVAVYVDDLVIA-GRREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
+P+++A+AL PEA + + M +E+ L+ N TWE D P G+ + +K + K ++G++ K RLVA+GF+ G D+ ET APVAR++T+ ++ +++ E +E+ +D +AYLN + E+++KLP++ + + ++PCLY + T I +A+YVDDL++A ++K+ K +++ F MKDLG + LGIE + TIT+ Q Y+ E+L R+ ++C+ V TP K+ E K E K + + Y+++VGSLMY + T PDIA+ V + + + + KR+ RYL P+ GI+F ++ LEGF DADW +++DR S TG+ F L
Sbjct: 89 DPETSAQALTSPEASEWKKAMLKEYRTLIANNTWEIVD---RPIGKKIVESKWALRTKYNQNGNIEKRKARLVAKGFTQRAGIDYSETFAPVARLNTIRLLMAISAEMGLEIHQLDFVSAYLNGTIETEIYMKLPTDLFSILDEEEASQYTEDKVCLLKKAIYGLKQSGRLWYQKLHTKLSNMGMSASKSDPCLYTYNNNN--TIILIAIYVDDLIVACNDKQKLSRIKDELASSFEMKDLGPIKLCLGIEFNQCLKTNTITMCQSRYVAEILNRFQMNDCKPVSTPANTSIKLCK-EMCPKTEEEK----LSASKLPYQNLVGSLMYLAVSTRPDIAHIVSVLSQFNTNYGNQHWVAAKRVLRYLKGTPNLGISFT-RTRNFSLEGFADADWGSNIDDRRSYTGFAFTL 487
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A535EWW2_9CHLR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535EWW2_9CHLR) HSP 1 Score: 197 bits (500), Expect = 4.590e-55 Identity = 136/395 (34.43%), Postives = 196/395 (49.62%), Query Frame = 1
Query: 10 EPKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESEDPGRLPAGR--IRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSETPTL-------TNPCLY---------------FSRDEG-----------EDTDIRVAVYVDDLVIAG-RREKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVLGNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLEGFVDADWVEDVEDRTSATGYVFKL 1086
EPKS EA K M +E+ +L+ENGTW DP P GR +R + I+K K +G + YK R V +GF +G D+ ET A V + + +F+LA HD+ELE MDV A+L +EE++V+ P E N LY F + G + + +AVYVDDL+I G +E++ + K +++ F+M DLG LG+ +RRDRPNRTI +SQ Y+ +LK + E + V TP++ +A E + PE + Y+S VGSLMY GT PDIA+ V + +P + KRIFRYL + + + G L G+ DADW D + R S +GY+F +
Sbjct: 104 EPKSLEEAKNDYIWDKWLKAMVDEYDSLMENGTWTLVDP---PPGRRILRGRWIYKIKRGPNGEILRYKARWVVRGFEQEQGLDYNETFASVVKPMSYKALFALAAAHDLELEQMDVKTAFLYGDIEEEIYVERPPEVGEKHSGKVCRLNKALYGLKQSPRVWYKTLAAFLKKSGFEPLSPDFSVFHNNGMFIAVYVDDLLIVGPSKEEIQKVKDTLNKEFQMTDLGPCQYYLGMRIRRDRPNRTIYLSQQGYLERILKDFDMWESKPVATPLDNSRFETAEEGYECKPEDR---------KRYQSAVGSLMYAMLGTRPDIAFAVSVVSRYASNPTEAHWRAVKRIFRYLRSTITLELVYTGDFKP--LLGYSDADWAGDHDTRRSTSGYIFNI 484
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU) HSP 1 Score: 202 bits (514), Expect = 3.420e-54 Identity = 141/401 (35.16%), Postives = 202/401 (50.37%), Query Frame = 1
Query: 13 PKSAAEALQGPEAGKRRAVMEEEWGALVENGTWESEDPGRLPAG--RIRTKCIFKQKLKEDGSVACYKVRLVAQGFSLVEGEDFFETSAPVARMSTLPIVFSLAVEHDVELEGMDVDAAYLNAPGDEELFVKLPSETP-------------------------TL-------------TNPCLYFSRDEGEDTDIRVAVYVDDLVIAGR-REKVDEFKHKISQRFRMKDLGSLSRMLGIEVRRDRPNRTITISQCDYIREVLKRYGFDECRGVPTPVEGKGKISAPESADKPPEPKPLGAVL--GNSTEYRSMVGSLMYTSTGT*PDIAYTVHQAAHRMEDPCREDFSICKRIFRYLSTIPDFGITFGGKSNGHGLE--GFVDADWVEDVEDRTSATGYVF 1080
P + EA PE RA +EEE L +N +E+ +P+G I +K + + K ++G + YK+R+VA+GF+ G D+ + APVA + ++ I+ +LA +D+EL+ MDV AAYLN DEEL++ P TL + CLY RD+ V VYVDDL++A R +DE K K++ +F+M+DLG S +LGI +RRDRP R I +SQ YI VL RYG +C+ TP+ K SAD P + L ++ G S Y S++GS+MY GT PDIAY V +P R + + KR RYL D + F G ++ G+ DADW D + S +G+VF
Sbjct: 983 PSTLREAFSTPEGEHWRAALEEELQNLRDNCVYETVP---IPSGVKPITSKPVLRVKFDKNGGIERYKIRIVARGFTQKPGIDYQDVFAPVANLESVRIILALAARYDLELDQMDVSAAYLNGELDEELYLMPPDGVAIEPGHCWRLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVK----PSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKRCHWEMAKRGLRYLKATRDMELRFDGSDVAGDMDFHGYSDADWSGDRDTSRSTSGFVF 1375 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig220.5817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig220.5817.1 >prot_H-paniculata_contig220.5817.1 ID=prot_H-paniculata_contig220.5817.1|Name=mRNA_H-paniculata_contig220.5817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp MEEEWGALVENGTWESEDPGRLPAGRIRTKCIFKQKLKEDGSVACYKVRLback to top mRNA from alignment at H-paniculata_contig220:1739..2988- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig220.5817.1 ID=mRNA_H-paniculata_contig220.5817.1|Name=mRNA_H-paniculata_contig220.5817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1250bp|location=Sequence derived from alignment at H-paniculata_contig220:1739..2988- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig220:1739..2988- >mRNA_H-paniculata_contig220.5817.1 ID=mRNA_H-paniculata_contig220.5817.1|Name=mRNA_H-paniculata_contig220.5817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig220:1739..2988- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |