prot_H-paniculata_contig2196.5801.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2196.5801.1
Unique Nameprot_H-paniculata_contig2196.5801.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length587
Homology
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BLAST of mRNA_H-paniculata_contig2196.5801.1 vs. uniprot
Match: D7FRQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ8_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 9.490e-70
Identity = 255/640 (39.84%), Postives = 309/640 (48.28%), Query Frame = 0 
Query:    3 SELSELRAELWRTRDDLERMKSSSNSRTPTKARAPRSHPSPRIFDRRRHNAE--------SATDKSTADRRKGRYDHQYPLEDDKRQDRHLIAADSAAAAGGGDVKESPEREGKSRRSR-GSGVESGPTSPPTSRESVVGSESNGAGNTPAVARDGS-----GSGHRRIYDSSPGVGAE---TEATLCNLEFEGVAFKNWTEEASSIAVRLIEEVKALRWERETWRNEQATAARAFAELRT----RADALEGRLIEAEAEEKRSRDTLAHAQQAERQQSRATERAKADLRAAREQAGALHA--------------------------------HELGLGAGTAGGLREQLRREREGTDALQRRLDTARTKLAGYERERKEWRVWKARLEEMRRSWGNQLKKVAKKMRAKSEENAALKVRVAETERARDRADAEAFRLRDNLDRLTEQRDNLLLGATRAGH-----ASSPADALAEXXXXXXXXXXXXXXXXXXXXTANTNLGRDRGIDGINRGLRLGGAWGELFPGEGGHGGGNDXXXXGARRQGDREGXXXXXXXXXGALEVSAEELERARAEAKLAKVAVQQERLKRDGAMREKDEAVRQLHRLMGAARRAVGKRDNKLRSSRLETEVVWNALTEAVR 584
            SELSELRAELWRTRDDLER+KS      P+   +PR H     FDRRRH A         +A +    DR   R+ H    + D      L A   A    GG ++  P           GSG +    +P      + G+ S+G+ +     + GS     GS      +++ G  +E    E TLCNLE EG AFKNWTEEASSIAVRLIEEVK LRWE+ +W   +  A             +AD LE RL  AEA+ +R+++ LA AQQ         ER           A  L A                                            L E LRRE+EG DALQRRLD AR   A +E+ERKEWR                           ++ENAAL+ RV E ERARDRADA++   R+ L RLTEQRDNLLLGATR G      ASSPA+ LAE    XXXXXXX            T++G               GA GEL                                           +LE+AR+EAKLA+VA QQERL+R+ A REK+EAVRQLHRLMGAARRAVG+RD++L+SSR+ETEVVWNALTEAVR
Sbjct:    4 SELSELRAELWRTRDDLERIKS--RGTPPSADCSPRRH-----FDRRRHRASPSPTLAATTACEVRNKDRDYRRHRHSEQHKGDG-----LEAGGGARGDSGGGIRSXPXXXXXXXXXXPGSGADYDDEAP----RGLGGTASSGSSHGGRQLKFGSSRGRVGSASSEGENAAKGGSSEEVAAEETLCNLELEGAAFKNWTEEASSIAVRLIEEVKMLRWEKASWAERERAAEXXXXXXXXXXXXQADHLEERLGLAEADGRRAQEALARAQQD-------VERXXXXXXXXXXXAEGLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVEMLRREKEGADALQRRLDAARAASARHEKERKEWRSSXXXXXXXXXXXXXXXXXXXXXXXXMTKENAALRARVGEAERARDRADADSLGHREELRRLTEQRDNLLLGATRLGGRRGLVASSPAETLAELLAAXXXXXXXDA----------TDVGP--------------GADGELEA-----------------------------------------QLEQARSEAKLARVAAQQERLRREAAAREKEEAVRQLHRLMGAARRAVGRRDSRLKSSRMETEVVWNALTEAVR 555
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2196.5801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRQ8_ECTSI9.490e-7039.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..326
NoneNo IPR availableCOILSCoilCoilcoord: 221..258
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availableCOILSCoilCoilcoord: 505..534
NoneNo IPR availableCOILSCoilCoilcoord: 355..396
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2196contigH-paniculata_contig2196:16499..18622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2196.5801.1mRNA_H-paniculata_contig2196.5801.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2196 15624..19430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2196.5801.1 ID=prot_H-paniculata_contig2196.5801.1|Name=mRNA_H-paniculata_contig2196.5801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=587bp
MTSELSELRAELWRTRDDLERMKSSSNSRTPTKARAPRSHPSPRIFDRRR
HNAESATDKSTADRRKGRYDHQYPLEDDKRQDRHLIAADSAAAAGGGDVK
ESPEREGKSRRSRGSGVESGPTSPPTSRESVVGSESNGAGNTPAVARDGS
GSGHRRIYDSSPGVGAETEATLCNLEFEGVAFKNWTEEASSIAVRLIEEV
KALRWERETWRNEQATAARAFAELRTRADALEGRLIEAEAEEKRSRDTLA
HAQQAERQQSRATERAKADLRAAREQAGALHAHELGLGAGTAGGLREQLR
REREGTDALQRRLDTARTKLAGYERERKEWRVWKARLEEMRRSWGNQLKK
VAKKMRAKSEENAALKVRVAETERARDRADAEAFRLRDNLDRLTEQRDNL
LLGATRAGHASSPADALAELLAAAAAGVATGAGTGTRASTANTNLGRDRG
IDGINRGLRLGGAWGELFPGEGGHGGGNDGNGGGARRQGDREGGGGESGS
AGGALEVSAEELERARAEAKLAKVAVQQERLKRDGAMREKDEAVRQLHRL
MGAARRAVGKRDNKLRSSRLETEVVWNALTEAVREE*
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