prot_H-paniculata_contig21930.5794.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21930.5794.1
Unique Nameprot_H-paniculata_contig21930.5794.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length131
Homology
BLAST of mRNA_H-paniculata_contig21930.5794.1 vs. uniprot
Match: D8LH34_ECTSI (Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH34_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 7.770e-14
Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 0
Query:    7 NITALLQTERVLDESPPGDERDAKVNLLKFCQVDVVPNCRRIADSLYLYLQRNGLSHLRRIHEVKGDL----MQPIETGSIKDYLLHAERAKLRLDKLMKEVAPAG 108
            NI  LLQ E  L+  P   ER AKVNLLKF QV+ V    R++ +LY  L+R+   H   +   K  L     QP+E GSI+DYL+ AE AK  LD+L+  +A  G
Sbjct:    7 NIRELLQLEEELNTLPCSIERSAKVNLLKFLQVNAVVEYERVSTALYFDLRRDAGFHELSLVPEKNHLGHTCSQPMEAGSIEDYLVQAEEAKACLDRLIYSIATPG 112          
BLAST of mRNA_H-paniculata_contig21930.5794.1 vs. uniprot
Match: A0A6H5KKK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK7_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.400e-8
Identity = 50/130 (38.46%), Postives = 69/130 (53.08%), Query Frame = 0
Query:    7 NITALLQTERVLDESPPGDERDAKVNLLKFCQVDVVPNCRRIADSLYLYLQRNG-LSHLRRIHEVKGDLM---QPIETGSIKDYLLHAERAKLRLDKLMKEVAPA--GAEVVTTGVKTVDSTTRTRAEAY 130
            NI  LL+ E+ +    P  +RDAKVNLLK+ QV  V   +   D LY  L R G L  LRR +     L    QP + G +++YL  A+ A+  LDKL+++V     G E    G K+ DS  R +AE +
Sbjct:   10 NIQELLELEKEIRSKIPSLDRDAKVNLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLEGLRRKNMAAARLKPVEQPKKLG-LQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGTKSPDSVMR-KAERF 137          
BLAST of mRNA_H-paniculata_contig21930.5794.1 vs. uniprot
Match: A0A6H5JLM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM9_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 4.300e-5
Identity = 50/143 (34.97%), Postives = 68/143 (47.55%), Query Frame = 0
Query:    6 FNITALLQTERVLDESPPGD------ERDAKVNLLKFCQVDVVPNCRRIADSL-YLYLQRNGLSHLRRIHEVK-GDLMQPIE--------TGSIKDYLLHAERAKLRLDKLMKEVAPA--GAEVVTTGVKTVDSTTRTRAEAY 130
            F+I  LLQ E  L    PG       ER AK+NLLKF QV+ V +  R  D L Y   +  GL  +R I   +  D++QP +           +  YL  A+ AK  LD+L++ V     G EV    VK+++ST R     Y
Sbjct:   47 FSIEDLLQVEADLKHDAPGSGIAMSLERRAKINLLKFLQVETVLHFERQYDQLCYERNKDGGLECVRGIPPARMKDMLQPQKMKRQKCELAEKLHFYLAAAKVAKRCLDELVQNVVGGLEGCEVQFADVKSLESTERKTVNFY 189          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21930.5794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LH34_ECTSI7.770e-1444.34Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5KKK7_9PHAE3.400e-838.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLM9_9PHAE4.300e-534.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21930contigH-paniculata_contig21930:1384..1776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21930.5794.1mRNA_H-paniculata_contig21930.5794.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21930 52..3545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21930.5794.1 ID=prot_H-paniculata_contig21930.5794.1|Name=mRNA_H-paniculata_contig21930.5794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
MNDEMFNITALLQTERVLDESPPGDERDAKVNLLKFCQVDVVPNCRRIAD
SLYLYLQRNGLSHLRRIHEVKGDLMQPIETGSIKDYLLHAERAKLRLDKL
MKEVAPAGAEVVTTGVKTVDSTTRTRAEAY*
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