prot_H-paniculata_contig21790.5763.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21790.5763.1
Unique Nameprot_H-paniculata_contig21790.5763.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 1.320e-13
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 MADGLKEALYVWG---ILRPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 74
            M DG+KEAL+V G   +LRP  K   I  FEDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:  622 MGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 699          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JNH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH6_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.420e-13
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    1 MADGLKEALY---VWGILRPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTE 72
            +AD LKE L+   VW  + P      I  FEDN+GA ++ +NP++ S SKHID++HHF+RELV  ++I + HV++E
Sbjct:   17 IADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSE 92          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.820e-13
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 MADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 74
            M DG+KEAL+V G+L   RP  K   I  FEDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:  449 MGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 526          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.840e-13
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 MADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 74
            M DG+KEAL+V G+L   RP  K   I  FEDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct: 1177 MGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 1254          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.310e-13
Identity = 41/78 (52.56%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 MADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 74
            M DG+KEAL+V G+L   RP +K   I   EDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:  155 MGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 232          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JPS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.430e-13
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 MADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 74
            M DG+KEAL+V G+L   RP  K   I  FEDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:    1 MGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIDVTHVPSKEQ 78          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5KKB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB7_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 2.940e-13
Identity = 40/78 (51.28%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    1 MADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 74
            M DG+KEAL+V G+L   RP  K   I   EDN+ A  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:    1 MGDGVKEALFVNGMLQFLRPSAKTRKIDVVEDNERAIALAENPLSSSWSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 78          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5KGM1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM1_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.360e-13
Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    1 MADGLKEALY---VWGILRPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVST 71
            +AD LKE L+   VW  + P      IS FEDN+GA ++ +NP++ S SKHID++HHF+RELV  +DI + HV T
Sbjct:  557 IADVLKEVLFLKQVWRFMLPDASMPCISVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKDISITHVPT 631          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.390e-13
Identity = 42/78 (53.85%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    1 MADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 74
            M DG+KEAL+V G+L   RP  K   I   EDN+GA  L  NPLS S SKHID++HHFLR L     I V HV +EE+
Sbjct:  392 MGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQ 469          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.410e-13
Identity = 42/78 (53.85%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    1 MADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 74
            M DG+KEAL+V G+L   RP  K   I   EDN+GA  L  NPLS S SKHID++HHFLR L     I V HV +EE+
Sbjct:  857 MGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQ 934          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV80_9PHAE1.320e-1353.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JNH6_9PHAE1.420e-1346.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP36_9PHAE1.820e-1353.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE1.840e-1353.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCG6_9PHAE2.310e-1352.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPS0_9PHAE2.430e-1353.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKB7_9PHAE2.940e-1351.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGM1_9PHAE3.360e-1349.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K9B2_9PHAE3.390e-1353.85Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKK1_9PHAE3.410e-1353.85Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21790contigH-paniculata_contig21790:551..787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21790.5763.1mRNA_H-paniculata_contig21790.5763.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21790 3..827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21790.5763.1 ID=prot_H-paniculata_contig21790.5763.1|Name=mRNA_H-paniculata_contig21790.5763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
MADGLKEALYVWGILRPKMKFLGISAFEDNKGAKELTNNPLSLSSKHIDI
QHHFLRELVANEDIMVKHVSTEEESLIL*
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