mRNA_H-paniculata_contig2179.5762.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: D7FYI0_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI0_ECTSI) HSP 1 Score: 239 bits (609), Expect = 5.080e-69 Identity = 118/173 (68.21%), Postives = 144/173 (83.24%), Query Frame = 1
Query: 1 VTFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVS 519
VTF+ KGMVFSADHMNDP RI MCE+G LSEGRRDALL+FPWHHD+I+HEAGIPPIHTP++TLE L DD+KKR+ +VHVSESSIP +SGLKVAP GV++T+RL+T +N + EA++VLDLI SVG+LS +S+ QARSLLEVA+ F A +Q D T+FAII HGKA+S
Sbjct: 735 VTFKGKGMVFSADHMNDPGRIREMCEQGFLSEGRRDALLDFPWHHDLIYHEAGIPPIHTPIQTLEGLADDLKKRVFVVHVSESSIPKDSGLKVAPAGVKNTMRLDTIANIHEEALDVLDLICSVGILSGVSVAQARSLLEVARQVRFEANAIVQHRDIDTTDFAIICHGKAMS 907
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A836CNA7_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA7_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.010e-66 Identity = 134/268 (50.00%), Postives = 174/268 (64.93%), Query Frame = 1
Query: 1 VTFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTV--RLETPSNAY---AEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKA----------VSI-VTK---------APGARRS------YSLKETTLRRGDCFGEELLLAGSVRRKGYVRVRAVTDMEVLLFSGKDLEQVVG 711
V F + +VFSADHMNDP RI M +G+LS+GRRDALL FPWHHD IFHEAG+PPIHTP+RTL ELP+DVKKRL++VHV+ SSIPP+SGL+VAP GV++TV R+E P + A++ LDLIGSVG+ S+TQAR LLE+ RT+ AG+ +Q+ VT+ I+S+G+A V++ TK AP RRS YS + L RGD FGEE L+ + V A+TD+E+L+ S DL V+G
Sbjct: 417 VFFGKRSIVFSADHMNDPERIAQMARDGILSDGRRDALLAFPWHHDAIFHEAGVPPIHTPIRTLAELPEDVKKRLYVVHVTPSSIPPDSGLRVAPLGVQNTVAIRVEAPPQQHHIAGSAVDALDLIGSVGIFGHCSLTQARDLLELGSRRTYPAGSIIQEAGGAVTDVCIVSNGRALVRYSAMARGVTVPATKESGEHGAAVAPQQRRSWQDEVLYSGADDVLSRGDWFGEEALMDAAT--PAAAAVVAITDVELLVLSATDLRWVLG 682
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A4D9D8U0_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8U0_9STRA) HSP 1 Score: 216 bits (551), Expect = 2.710e-61 Identity = 127/298 (42.62%), Postives = 184/298 (61.74%), Query Frame = 1
Query: 1 VTFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGARRSYSLKETTLRR-----GDCFGEELLL---AGSVRRKGYVRVRAVTDMEVLLFSGKDLEQVVG----LEKRTLEDKY-----------RVDRLLVHNSVLSALSRKQILLLESITE 825
V F +K +VFSADH NDP+RI M EEG+LS GRRD LLNFPW+HD+I HEAG+PPIHTP+ TLE L DD+KKR+++VHVSE ++P ES LK+AP GV++T+ + ++EA+ VL LIG + +L+ L++TQAR LLE+ R F AG + S T+F ++S G + + R + +RR GD FGE L A V+ + VRA+TD+E+++F+G +L ++ + L+ ++ R++RLL N L++L+R Q L LES+ E
Sbjct: 329 VFFADKSIVFSADHCNDPSRIRQMHEEGILSAGRRDELLNFPWNHDLILHEAGVPPIHTPLATLEALDDDIKKRMYLVHVSEGAVPKESKLKIAPVGVKNTLEVPVDVPEFSEAISVLGLIGDIHLLTDLTLTQARGLLEIGYKRRFAAGEVVVGKGSIPTDFCVLSSG-LLEVTYPVEEEGRPEDEEAANVRRVHWSVGDYFGEVAFLQQAAAPVQEE----VRALTDVEIVVFAGSELRYLLAHAPISSRMQLQARFSAMSPSTLSYTRLERLLTFNYTLNSLTRAQKLALESLGE 621
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A6H5KVN3_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN3_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.280e-58 Identity = 119/233 (51.07%), Postives = 141/233 (60.52%), Query Frame = 1
Query: 1 VTFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEE------------------------------------------------------------LPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVS 519
VTF+ KGMVFSADHMNDP RI MCE+G LSEGRRDALLNFPWHHD+IFHEAGIPPIHTP++TLE L DD+KKR+ +VHVSESSIP +SGLKV P GVE+T+RL+T +N + EA++ LDLI SVG+LS +S+ QARSLLEVA+ F A +Q D T+FAII HGKA S
Sbjct: 781 VTFKGKGMVFSADHMNDPGRIREMCEQGFLSEGRRDALLNFPWHHDLIFHEAGIPPIHTPIQTLERIFRMGVAFYGRKYMVSHPFRVLLWRYDAVVRRAGCPQDRTTFAGSIGEVLRDFFCFLPQGLADDLKKRVFVVHVSESSIPKDSGLKVPPAGVENTMRLDTIANIHEEALDSLDLICSVGILSGVSVAQARSLLEVARQVRFEANAIVQHCDIDTTDFAIICHGKATS 1013
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A7S2RSQ4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RSQ4_9STRA) HSP 1 Score: 181 bits (460), Expect = 8.160e-51 Identity = 112/297 (37.71%), Postives = 160/297 (53.87%), Query Frame = 1
Query: 7 FENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNA-YAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGARRSY-------------SLKETTLR---RGDCFGEELLLAGSVRRKGYVRVRAVTDMEVLLFSGKD----------LEQVVGLEKRTLEDKYRVDRLLVHNSVLSALSRKQILLLES 816
F + +VFSADHMNDP +I +C+ GV+S GRRD+LL FPW HD+I HEAG+PPIHTPM TL LPDDVK+RL++VHVS IPP SGL+ A GVE+T+ ++ +A+A+E+LDL+ S+ + S+L++ A +L K F AG + + T F + G A V K P R + T++ GD FGE+ L++ R + A+ D++VL F D +EQ+ L + + + NS+L LS Q LE+
Sbjct: 14 FGGRSIVFSADHMNDPTKIRELCDAGVVSPGRRDSLLEFPWQHDLILHEAGVPPIHTPMETLSALPDDVKRRLYVVHVSIDKIPPNSGLRAAIPGVENTIVVDNVEEPPHAKALEILDLVSSIPIFSRLTVKHASDILSFCKAEHFCAGDCIVRKGDEGTCFYAMMSGTAEVRVEKPPSRARXXXXXXXXXXXXXXDDINLVTVKIYHAGDYFGEQALISDVAIRTA--DIYAMNDVKVLRFDRSDFTWLLKNTNIVEQMSSLAEMRNNGSWEA---MSENSILGMLSVSQKTQLET 305
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A7S1CH30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH30_9STRA) HSP 1 Score: 173 bits (439), Expect = 7.100e-49 Identity = 90/185 (48.65%), Postives = 122/185 (65.95%), Query Frame = 1
Query: 4 TFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGARRSYS 558
+F K +VFSADH NDP RI ++ EGV+ +GRRD L+NFPWHHD+I HEAG+PPIHTPM TL LP+DVK+RL +VHV E IP SGL+ A GVE+TV L+ + A ME LDL+ ++ +LS LS++ AR +L++ TF AG+ + F II+ G A V ++ + R+ S
Sbjct: 121 SFGGKSIVFSADHCNDPERIKALHREGVIGDGRRDELMNFPWHHDLILHEAGVPPIHTPMATLAALPEDVKRRLLVVHVGEKDIPAGSGLRRAAQGVENTVVLDVEAPVDAGLMEALDLVSNIDLLSSLSLSHAREILQLTTRETFPAGSFIVRKGERGDTFHIIATGVAEIRVGRSKRSARTPS 305
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A7S3PKR7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PKR7_9STRA) HSP 1 Score: 179 bits (453), Expect = 7.880e-48 Identity = 107/267 (40.07%), Postives = 151/267 (56.55%), Query Frame = 1
Query: 7 FENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPS-NAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGAR-----------------------RSYSLKE--------------TTLRRGDCFGEELLLAGSVRRKGYVRVRAVTDMEVLLFSGKD 693
F K +VFSADHMNDP +I +C++GV+S GRRD LLNFPWHHD+I HEAG+PPIHTPM TL L D++KKR+++VHV+ IP SGL+ A TGVE+T+ LE ++ A+E+L+L+GS+ + S L+I +A +L+ A I TF AG T+ + T F I G A V ++ + R+ S++E T GD FGE+ L++ + R + AVTD+ V +F D
Sbjct: 262 FGGKSIVFSADHMNDPVKIKQLCDDGVVSPGRRDELLNFPWHHDIILHEAGVPPIHTPMETLISLSDEIKKRVYVVHVALDKIPENSGLQPAITGVENTIVLEDAEVPQHSGALEILELVGSIELFSDLTIKRAGEILDFAHIETFNAGDTVIEKGQVGTCFYAILSGVAEVRVCRSRSSTFEVQLTSSYLLDKDRIQPVSPRVRARSVEEYRESDLELSEQYTVKTFLAGDYFGEQSLISDNNIRSA--DILAVTDLRVAVFDRSD 526
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A4Q3JEE7_9DELT (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q3JEE7_9DELT) HSP 1 Score: 164 bits (416), Expect = 4.960e-44 Identity = 104/265 (39.25%), Postives = 146/265 (55.09%), Query Frame = 1
Query: 16 KGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGARRSYSLKETTLRRGDCFGEELLLAGSVRRKGYVRVRAVTDMEVLLFSGKDLEQVVGLEKRTLE-DKYRVDR---LLVHNSVLSALSRKQ 798
K + FS D + DP R+ ++ E GVLS GR AL++FPWHH ++ HEAG+PP+HTP L LPDDVK+RLH+VH++E +P SGL+V G+E+TVRL+ +A+A+ +LD SV + + +A +L++A++ T AG T+ + F II G +VT G R LK T GD FGE L+ G R V VT +EV + L + L R K R +R L NSVL +L+ Q
Sbjct: 99 KSLAFSGDSLYDPDRLAALREAGVLSPGRAQALIDFPWHHTLVLHEAGVPPLHTPASVLAALPDDVKERLHVVHIAEKDVPANSGLRVGKVGLENTVRLDVSRGPHADAVSILDAFDSVDLFRDFPLARAAEILQMARLVTHPAGHTIIAQGTVGDAFYIIVSG----VVTVRQGGRE---LK--TYGAGDYFGETALVLGQPRVADCVATTEVTLVEVGRYDFLYLLRGTALPSRLARLAKMREERSWELFDRNSVLRSLTPTQ 354
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A2R5G3T9_9STRA (cGMP-dependent 3',5'-cGMP phosphodiesterase A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3T9_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.020e-43 Identity = 81/149 (54.36%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 7 FENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLE-TPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAG 450
F + +VFSADHMNDP RI +CE+GVLS GRRDALL FPW D+I HEAG+PPIHTPM TL LPDDVKKRL++VHVS IP SGL+ A GVEHT+ L+ ++ A+E+LDL+ S+ + S L++ A +L + AG
Sbjct: 378 FGGRSIVFSADHMNDPTRIQQLCEDGVLSPGRRDALLEFPWDRDLILHEAGVPPIHTPMETLSALPDDVKKRLYVVHVSLDKIPEGSGLRAAIPGVEHTISLDGVEEPPHSRALEILDLVSSIPLFSHLTVKHASDILSFCRTEEIRAG 526
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A7S1C435_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C435_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.020e-42 Identity = 82/174 (47.13%), Postives = 115/174 (66.09%), Query Frame = 1
Query: 4 TFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIV 525
T+ K +VFSADHMNDP +I + +GVLS+GRRD LL FPWH D+I HEAG+PPIHTPM TL L DDVK RL +VHV ++IP +SGL A GVE+T+ L+ A+ E LDL+G + ++S L++ +R LL++ K + +AG + +S F +++ G A + V
Sbjct: 458 TYGGKSIVFSADHMNDPDKIRELHAQGVLSDGRRDELLAFPWHGDLILHEAGVPPIHTPMATLVGLSDDVKSRLRVVHVGANAIPRDSGLTRAKAGVENTMHLDVDPPVEADVTETLDLLGGIDLMSSLTLVHSRELLQLCKRQRVSAGDVISKANSGEDVFYVVARGIAEATV 631 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2179.5762.1 >prot_H-paniculata_contig2179.5762.1 ID=prot_H-paniculata_contig2179.5762.1|Name=mRNA_H-paniculata_contig2179.5762.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp MVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIback to top mRNA from alignment at H-paniculata_contig2179:10644..22023- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2179.5762.1 ID=mRNA_H-paniculata_contig2179.5762.1|Name=mRNA_H-paniculata_contig2179.5762.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11380bp|location=Sequence derived from alignment at H-paniculata_contig2179:10644..22023- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2179:10644..22023- >mRNA_H-paniculata_contig2179.5762.1 ID=mRNA_H-paniculata_contig2179.5762.1|Name=mRNA_H-paniculata_contig2179.5762.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig2179:10644..22023- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |