mRNA_H-paniculata_contig2179.5762.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2179.5762.1
Unique NamemRNA_H-paniculata_contig2179.5762.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: D7FYI0_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI0_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 5.080e-69
Identity = 118/173 (68.21%), Postives = 144/173 (83.24%), Query Frame = 1
Query:    1 VTFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVS 519
            VTF+ KGMVFSADHMNDP RI  MCE+G LSEGRRDALL+FPWHHD+I+HEAGIPPIHTP++TLE L DD+KKR+ +VHVSESSIP +SGLKVAP GV++T+RL+T +N + EA++VLDLI SVG+LS +S+ QARSLLEVA+   F A   +Q    D T+FAII HGKA+S
Sbjct:  735 VTFKGKGMVFSADHMNDPGRIREMCEQGFLSEGRRDALLDFPWHHDLIYHEAGIPPIHTPIQTLEGLADDLKKRVFVVHVSESSIPKDSGLKVAPAGVKNTMRLDTIANIHEEALDVLDLICSVGILSGVSVAQARSLLEVARQVRFEANAIVQHRDIDTTDFAIICHGKAMS 907          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A836CNA7_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA7_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.010e-66
Identity = 134/268 (50.00%), Postives = 174/268 (64.93%), Query Frame = 1
Query:    1 VTFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTV--RLETPSNAY---AEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKA----------VSI-VTK---------APGARRS------YSLKETTLRRGDCFGEELLLAGSVRRKGYVRVRAVTDMEVLLFSGKDLEQVVG 711
            V F  + +VFSADHMNDP RI  M  +G+LS+GRRDALL FPWHHD IFHEAG+PPIHTP+RTL ELP+DVKKRL++VHV+ SSIPP+SGL+VAP GV++TV  R+E P   +     A++ LDLIGSVG+    S+TQAR LLE+   RT+ AG+ +Q+    VT+  I+S+G+A          V++  TK         AP  RRS      YS  +  L RGD FGEE L+  +        V A+TD+E+L+ S  DL  V+G
Sbjct:  417 VFFGKRSIVFSADHMNDPERIAQMARDGILSDGRRDALLAFPWHHDAIFHEAGVPPIHTPIRTLAELPEDVKKRLYVVHVTPSSIPPDSGLRVAPLGVQNTVAIRVEAPPQQHHIAGSAVDALDLIGSVGIFGHCSLTQARDLLELGSRRTYPAGSIIQEAGGAVTDVCIVSNGRALVRYSAMARGVTVPATKESGEHGAAVAPQQRRSWQDEVLYSGADDVLSRGDWFGEEALMDAAT--PAAAAVVAITDVELLVLSATDLRWVLG 682          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A4D9D8U0_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8U0_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.710e-61
Identity = 127/298 (42.62%), Postives = 184/298 (61.74%), Query Frame = 1
Query:    1 VTFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGARRSYSLKETTLRR-----GDCFGEELLL---AGSVRRKGYVRVRAVTDMEVLLFSGKDLEQVVG----LEKRTLEDKY-----------RVDRLLVHNSVLSALSRKQILLLESITE 825
            V F +K +VFSADH NDP+RI  M EEG+LS GRRD LLNFPW+HD+I HEAG+PPIHTP+ TLE L DD+KKR+++VHVSE ++P ES LK+AP GV++T+ +      ++EA+ VL LIG + +L+ L++TQAR LLE+   R F AG  +    S  T+F ++S G  + +        R    +   +RR     GD FGE   L   A  V+ +    VRA+TD+E+++F+G +L  ++       +  L+ ++           R++RLL  N  L++L+R Q L LES+ E
Sbjct:  329 VFFADKSIVFSADHCNDPSRIRQMHEEGILSAGRRDELLNFPWNHDLILHEAGVPPIHTPLATLEALDDDIKKRMYLVHVSEGAVPKESKLKIAPVGVKNTLEVPVDVPEFSEAISVLGLIGDIHLLTDLTLTQARGLLEIGYKRRFAAGEVVVGKGSIPTDFCVLSSG-LLEVTYPVEEEGRPEDEEAANVRRVHWSVGDYFGEVAFLQQAAAPVQEE----VRALTDVEIVVFAGSELRYLLAHAPISSRMQLQARFSAMSPSTLSYTRLERLLTFNYTLNSLTRAQKLALESLGE 621          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A6H5KVN3_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN3_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.280e-58
Identity = 119/233 (51.07%), Postives = 141/233 (60.52%), Query Frame = 1
Query:    1 VTFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEE------------------------------------------------------------LPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVS 519
            VTF+ KGMVFSADHMNDP RI  MCE+G LSEGRRDALLNFPWHHD+IFHEAGIPPIHTP++TLE                                                             L DD+KKR+ +VHVSESSIP +SGLKV P GVE+T+RL+T +N + EA++ LDLI SVG+LS +S+ QARSLLEVA+   F A   +Q    D T+FAII HGKA S
Sbjct:  781 VTFKGKGMVFSADHMNDPGRIREMCEQGFLSEGRRDALLNFPWHHDLIFHEAGIPPIHTPIQTLERIFRMGVAFYGRKYMVSHPFRVLLWRYDAVVRRAGCPQDRTTFAGSIGEVLRDFFCFLPQGLADDLKKRVFVVHVSESSIPKDSGLKVPPAGVENTMRLDTIANIHEEALDSLDLICSVGILSGVSVAQARSLLEVARQVRFEANAIVQHCDIDTTDFAIICHGKATS 1013          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A7S2RSQ4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RSQ4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 8.160e-51
Identity = 112/297 (37.71%), Postives = 160/297 (53.87%), Query Frame = 1
Query:    7 FENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNA-YAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGARRSY-------------SLKETTLR---RGDCFGEELLLAGSVRRKGYVRVRAVTDMEVLLFSGKD----------LEQVVGLEKRTLEDKYRVDRLLVHNSVLSALSRKQILLLES 816
            F  + +VFSADHMNDP +I  +C+ GV+S GRRD+LL FPW HD+I HEAG+PPIHTPM TL  LPDDVK+RL++VHVS   IPP SGL+ A  GVE+T+ ++      +A+A+E+LDL+ S+ + S+L++  A  +L   K   F AG  +     + T F  +  G A   V K P   R                +   T++    GD FGE+ L++    R     + A+ D++VL F   D          +EQ+  L +      +     +  NS+L  LS  Q   LE+
Sbjct:   14 FGGRSIVFSADHMNDPTKIRELCDAGVVSPGRRDSLLEFPWQHDLILHEAGVPPIHTPMETLSALPDDVKRRLYVVHVSIDKIPPNSGLRAAIPGVENTIVVDNVEEPPHAKALEILDLVSSIPIFSRLTVKHASDILSFCKAEHFCAGDCIVRKGDEGTCFYAMMSGTAEVRVEKPPSRARXXXXXXXXXXXXXXDDINLVTVKIYHAGDYFGEQALISDVAIRTA--DIYAMNDVKVLRFDRSDFTWLLKNTNIVEQMSSLAEMRNNGSWEA---MSENSILGMLSVSQKTQLET 305          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A7S1CH30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH30_9STRA)

HSP 1 Score: 173 bits (439), Expect = 7.100e-49
Identity = 90/185 (48.65%), Postives = 122/185 (65.95%), Query Frame = 1
Query:    4 TFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGARRSYS 558
            +F  K +VFSADH NDP RI ++  EGV+ +GRRD L+NFPWHHD+I HEAG+PPIHTPM TL  LP+DVK+RL +VHV E  IP  SGL+ A  GVE+TV L+  +   A  ME LDL+ ++ +LS LS++ AR +L++    TF AG+ +         F II+ G A   V ++  + R+ S
Sbjct:  121 SFGGKSIVFSADHCNDPERIKALHREGVIGDGRRDELMNFPWHHDLILHEAGVPPIHTPMATLAALPEDVKRRLLVVHVGEKDIPAGSGLRRAAQGVENTVVLDVEAPVDAGLMEALDLVSNIDLLSSLSLSHAREILQLTTRETFPAGSFIVRKGERGDTFHIIATGVAEIRVGRSKRSARTPS 305          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A7S3PKR7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PKR7_9STRA)

HSP 1 Score: 179 bits (453), Expect = 7.880e-48
Identity = 107/267 (40.07%), Postives = 151/267 (56.55%), Query Frame = 1
Query:    7 FENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPS-NAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGAR-----------------------RSYSLKE--------------TTLRRGDCFGEELLLAGSVRRKGYVRVRAVTDMEVLLFSGKD 693
            F  K +VFSADHMNDP +I  +C++GV+S GRRD LLNFPWHHD+I HEAG+PPIHTPM TL  L D++KKR+++VHV+   IP  SGL+ A TGVE+T+ LE      ++ A+E+L+L+GS+ + S L+I +A  +L+ A I TF AG T+ +     T F  I  G A   V ++  +                        R+ S++E               T   GD FGE+ L++ +  R     + AVTD+ V +F   D
Sbjct:  262 FGGKSIVFSADHMNDPVKIKQLCDDGVVSPGRRDELLNFPWHHDIILHEAGVPPIHTPMETLISLSDEIKKRVYVVHVALDKIPENSGLQPAITGVENTIVLEDAEVPQHSGALEILELVGSIELFSDLTIKRAGEILDFAHIETFNAGDTVIEKGQVGTCFYAILSGVAEVRVCRSRSSTFEVQLTSSYLLDKDRIQPVSPRVRARSVEEYRESDLELSEQYTVKTFLAGDYFGEQSLISDNNIRSA--DILAVTDLRVAVFDRSD 526          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A4Q3JEE7_9DELT (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q3JEE7_9DELT)

HSP 1 Score: 164 bits (416), Expect = 4.960e-44
Identity = 104/265 (39.25%), Postives = 146/265 (55.09%), Query Frame = 1
Query:   16 KGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIVTKAPGARRSYSLKETTLRRGDCFGEELLLAGSVRRKGYVRVRAVTDMEVLLFSGKDLEQVVGLEKRTLE-DKYRVDR---LLVHNSVLSALSRKQ 798
            K + FS D + DP R+ ++ E GVLS GR  AL++FPWHH ++ HEAG+PP+HTP   L  LPDDVK+RLH+VH++E  +P  SGL+V   G+E+TVRL+     +A+A+ +LD   SV +     + +A  +L++A++ T  AG T+    +    F II  G    +VT   G R    LK  T   GD FGE  L+ G  R    V    VT +EV  +    L +   L  R     K R +R   L   NSVL +L+  Q
Sbjct:   99 KSLAFSGDSLYDPDRLAALREAGVLSPGRAQALIDFPWHHTLVLHEAGVPPLHTPASVLAALPDDVKERLHVVHIAEKDVPANSGLRVGKVGLENTVRLDVSRGPHADAVSILDAFDSVDLFRDFPLARAAEILQMARLVTHPAGHTIIAQGTVGDAFYIIVSG----VVTVRQGGRE---LK--TYGAGDYFGETALVLGQPRVADCVATTEVTLVEVGRYDFLYLLRGTALPSRLARLAKMREERSWELFDRNSVLRSLTPTQ 354          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A2R5G3T9_9STRA (cGMP-dependent 3',5'-cGMP phosphodiesterase A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3T9_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.020e-43
Identity = 81/149 (54.36%), Postives = 103/149 (69.13%), Query Frame = 1
Query:    7 FENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLE-TPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAG 450
            F  + +VFSADHMNDP RI  +CE+GVLS GRRDALL FPW  D+I HEAG+PPIHTPM TL  LPDDVKKRL++VHVS   IP  SGL+ A  GVEHT+ L+      ++ A+E+LDL+ S+ + S L++  A  +L   +     AG
Sbjct:  378 FGGRSIVFSADHMNDPTRIQQLCEDGVLSPGRRDALLEFPWDRDLILHEAGVPPIHTPMETLSALPDDVKKRLYVVHVSLDKIPEGSGLRAAIPGVEHTISLDGVEEPPHSRALEILDLVSSIPLFSHLTVKHASDILSFCRTEEIRAG 526          
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Match: A0A7S1C435_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C435_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.020e-42
Identity = 82/174 (47.13%), Postives = 115/174 (66.09%), Query Frame = 1
Query:    4 TFENKGMVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPIHTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETPSNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNSSDVTNFAIISHGKAVSIV 525
            T+  K +VFSADHMNDP +I  +  +GVLS+GRRD LL FPWH D+I HEAG+PPIHTPM TL  L DDVK RL +VHV  ++IP +SGL  A  GVE+T+ L+      A+  E LDL+G + ++S L++  +R LL++ K +  +AG  +   +S    F +++ G A + V
Sbjct:  458 TYGGKSIVFSADHMNDPDKIRELHAQGVLSDGRRDELLAFPWHGDLILHEAGVPPIHTPMATLVGLSDDVKSRLRVVHVGANAIPRDSGLTRAKAGVENTMHLDVDPPVEADVTETLDLLGGIDLMSSLTLVHSRELLQLCKRQRVSAGDVISKANSGEDVFYVVARGIAEATV 631          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2179.5762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI0_ECTSI5.080e-6968.21Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A836CNA7_9STRA1.010e-6650.00Cyclic nucleotide-binding domain-containing protei... [more]
A0A4D9D8U0_9STRA2.710e-6142.62Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5KVN3_9PHAE1.280e-5851.07Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A7S2RSQ4_9STRA8.160e-5137.71Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S1CH30_9STRA7.100e-4948.65Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3PKR7_9STRA7.880e-4840.07Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A4Q3JEE7_9DELT4.960e-4439.25Cyclic nucleotide-binding domain-containing protei... [more]
A0A2R5G3T9_9STRA1.020e-4354.36cGMP-dependent 3',5'-cGMP phosphodiesterase A n=1 ... [more]
A0A7S1C435_9STRA2.020e-4247.13Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2179contigH-paniculata_contig2179:10644..22023 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.4
Seed ortholog evalue4e-57
Seed eggNOG ortholog2880.D7FYI0
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006195,GO:0006198,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008081,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009187,GO:0009214,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019932,GO:0019933,GO:0019934,GO:0019935,GO:0023052,GO:0032101,GO:0033036,GO:0034404,GO:0034613,GO:0034641,GO:0034654,GO:0034655,GO:0035556,GO:0040012,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046058,GO:0046434,GO:0046483,GO:0046700,GO:0047555,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050920,GO:0050926,GO:0051179,GO:0051641,GO:0051716,GO:0055086,GO:0061118,GO:0065007,GO:0070727,GO:0071704,GO:0072521,GO:0072523,GO:0072697,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1990778
EggNOG free text desc.Metallo-beta-lactamase superfamily
EggNOG OGs28VX6@1,2R2P1@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size846
Cds size825
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929594.452914-CDS-H-paniculata_contig2179:10643..108201622929594.452914-CDS-H-paniculata_contig2179:10643..10820Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 10644..10820 -
1691480927.953081-CDS-H-paniculata_contig2179:10643..108201691480927.953081-CDS-H-paniculata_contig2179:10643..10820Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 10644..10820 -
1622929594.473172-CDS-H-paniculata_contig2179:13585..136511622929594.473172-CDS-H-paniculata_contig2179:13585..13651Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 13586..13651 -
1691480927.9665332-CDS-H-paniculata_contig2179:13585..136511691480927.9665332-CDS-H-paniculata_contig2179:13585..13651Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 13586..13651 -
1622929594.4910593-CDS-H-paniculata_contig2179:16162..162441622929594.4910593-CDS-H-paniculata_contig2179:16162..16244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 16163..16244 -
1691480927.9753294-CDS-H-paniculata_contig2179:16162..162441691480927.9753294-CDS-H-paniculata_contig2179:16162..16244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 16163..16244 -
1622929594.5115843-CDS-H-paniculata_contig2179:16755..168741622929594.5115843-CDS-H-paniculata_contig2179:16755..16874Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 16756..16874 -
1691480927.9839714-CDS-H-paniculata_contig2179:16755..168741691480927.9839714-CDS-H-paniculata_contig2179:16755..16874Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 16756..16874 -
1622929594.5284877-CDS-H-paniculata_contig2179:18331..185381622929594.5284877-CDS-H-paniculata_contig2179:18331..18538Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 18332..18538 -
1691480927.9930398-CDS-H-paniculata_contig2179:18331..185381691480927.9930398-CDS-H-paniculata_contig2179:18331..18538Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 18332..18538 -
1622929594.5456026-CDS-H-paniculata_contig2179:21828..220021622929594.5456026-CDS-H-paniculata_contig2179:21828..22002Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 21829..22002 -
1691480928.0028408-CDS-H-paniculata_contig2179:21828..220021691480928.0028408-CDS-H-paniculata_contig2179:21828..22002Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2179 21829..22002 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929594.5571048-UTR-H-paniculata_contig2179:22002..220231622929594.5571048-UTR-H-paniculata_contig2179:22002..22023Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2179 22003..22023 -
1691480928.014971-UTR-H-paniculata_contig2179:22002..220231691480928.014971-UTR-H-paniculata_contig2179:22002..22023Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2179 22003..22023 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2179.5762.1prot_H-paniculata_contig2179.5762.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2179 10644..22002 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2179.5762.1

>prot_H-paniculata_contig2179.5762.1 ID=prot_H-paniculata_contig2179.5762.1|Name=mRNA_H-paniculata_contig2179.5762.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MVFSADHMNDPARIMSMCEEGVLSEGRRDALLNFPWHHDVIFHEAGIPPI
HTPMRTLEELPDDVKKRLHIVHVSESSIPPESGLKVAPTGVEHTVRLETP
SNAYAEAMEVLDLIGSVGVLSKLSITQARSLLEVAKIRTFTAGTTLQDNS
SDVTNFAIISHGKAVSIVTKAPGARRSYSLKETTLRRGDCFGEELLLAGS
VRRKGYVRVRAVTDMEVLLFSGKDLEQVVGLEKRTLEDKYRVDRLLVHNS
VLSALSRKQILLLESITEARLTVP*
back to top

mRNA from alignment at H-paniculata_contig2179:10644..22023-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2179.5762.1 ID=mRNA_H-paniculata_contig2179.5762.1|Name=mRNA_H-paniculata_contig2179.5762.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11380bp|location=Sequence derived from alignment at H-paniculata_contig2179:10644..22023- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTACTTTTGAGAACAAGGGAATGGTGTTCTCGGCAGATCACATGAACGA CCCAGCTCGTATAATGTCTATGTGCGAGGAGGGAGTTTTGTCAGAGGGAC GGCGTGATGCGCTATTAAACTTCCCGTGGCATCACGATGTCATATTCCAC GAAGCCGGGATCCCGCCCATACACACTCCTATGCGGACGCTTGAGGTGCT TATGCTGTGTGCGTGTGGATGTGTCGTGTTCGTGTGTTGCGCGTGTGTTG ATATGCGTGTGTTCGTTAGTATTAATAGTTGATTCCCATGTAACTGATTG CTTTGTTGCGATCGGTTGGGGTGATTCTCATTTTTGGATTTTGCTTCGTC CTATCGCGCTATTGATTTGGGATATTGTCTACTCCTGAAGTAACCTCATG TAGTACAAGCATTTAATCACGGATATGGGGTGCCCTGAATGAGCCAATCA CGCGTCAGGGGGGGTTGGAATGTCCGTTGATTAAGTGAGGCTCATGGCAA AGGATCATCCTCATCCTAACTAGGAGTTTGTTACGTTACGTTACGTTACG TTACGTTATGCTACCTTCATTCATATTATTACAGGGAGTAGTATGGAGCC ATAGTTTTAGCTCAACTCATCATGACAAAAGGTTCTTCACGAGATGAAAC AATATAATATGAGCCTGCAATTCTAAACGTCGCATTTCATAAGTTTTGTA CTGTTCATCCTTAAGCCCCCCCCTTTGTCCCCCCCCCCCCACATTTTTTG CCTGTATCAAGATTTTATGGATCATACTATTAGTCTCTTGCAAAAGAGCC CCGGTTTATCGACCGATTTGTTTTTATGATACCTCTGTCTCGATGAAGAC TAAGGAAGCTCTCGATGTCAACGAGGTTCGTTTTTTATTTCGACAAGCCT TCGTTTCACCTCCTTGGAAATTGGAAATTTACAATTGCAAAATAAACGAA AAATTACAGTAAACGGGAGGGAGGGGGGAAGGGAGGGAGAGGGAACATCT ATGACTTCATATGGTTGGCTTCACTGATGAATTCCCGTAGAGGCAGCTGG CGAGCAGCGCATTTCTTCGCGTGGTAAATCTACGAATTATATAGCTGTGA ACTCGCGATGCGAATGAGTAGCGTACTCATGACATCTACCAGAGTGCTAT CGTCGGCGTGAGAGATCTGGTCGAGGTCCATCTACCTGTGTCGTGCTTAC AGAATGCCCAGGAATATGGACGTTCTTTAAAGTAAAGTGACATGTAGAGT GTCGTCGTTATAGAAAGGTCCCGTCGAGATTCATCCACTCGTATCGTGTA TTTCTTGCAGAACACCCCGTCGAAATCTGTCTTCAGACTGACGGGCTCAC CCCTCGACAGAGCCACATGGTGAAAATACTGGGTCGCTCTTGATGTTTGT TGGATCAATATCGATTTACCAGGATGTGGTATATGGGACGACATTTTTCC GTTAGTGCGGCGTGTTGGATTCTCAAGACACTTCCGAAAATTCGTTGTTC AAAATTCCGTCACTCACCGTGTTTTACACGTTAGACTGTGCTGGTGCTTC GGAAGGCCATTGGGTCATTCAACGACGGAGTGGGGATATGATGTTAGACC CAGGAAGCATTCTTGCCGGGGAAGAAGGTGTACATTTTCTTCCCTCCCCC GGGGGCATTAAGCATCATCATTCCGCCGTTAGAATATGCAGGAAAGTATG GAGAGGGGAAAACATGGTAGTCAAGGAGTTTGATTTACTTGAAATAAAAG CAGCGAAGGTAATACCAGGGTGTTCGCTGGGCACCAGCAATGCAGCAGTA AGGGAAGAGTTCGGCATGCAATCCCTGATATCGAGGAGAGAAGTAAGAAC GCTGAAACGGCAGTATCGGCTGCTGCAGAAAATGAGAGAAACGATACTGC CAAACATCGCAGGAGAGTCAGCGTTGAGAGCAGGAAAAGGGTAGATGACC CAGTGAGTGGCTTGCCGTAGTAGAGGATGGGTGGAAATAACTGGAAACCT ACAAGAAGGAAACGCTGAAAAGTACGACGATGGACGGACTTAAGGAAGAG ATAATTGGTTCAACTGCAGTGAAATAAGAATAAAAAAACTGACAAGAGAA GCTGCGAGAAAGGAAGGCCTGGAAGAATACCGAAGGCTGGATGAAAGGGT AAGGTTGAATGGGTTATCGGCATGGACCACTAGACGCAGGCATAATATAG TCGGAAGACAGAGTCAGGACGTGAGATGTTGACGTCAAGCAACGCACGAA CCGATTCGGGGAAGTAGATGAGGACGACGACGATAAGTGTGACTGCGGTA TTGCGTGCGAGGACCGAATTCCTGTGGTTTGAGAAGGCCCTCTGCATGGT AACGAGAGAGAGAAATTTATACCATATGAGAAAATCAGGGGGAAACGAAC GGTGCGATAGAGAGGCCTTTGAATCACGGCATTATCAAAAGAGCGTAATG TTGGTTCTAGGAGATCAAAATTGGCCTGGATATACGATGGCTGAGATGAG TGGAATGTGCAAACATTGTCGAGATATATTTGGCAACGTAGGATAGGACG GTTAACCGTCCGAGATCGCTCTGATAGGAACAAAGCTCCGCCCTCTCGAA GACGCGTCGTCAATGGCCTAACAACTAGTGCATCCAACACATGAGTACAC CCTCCTGCCCCAGGGGCATTGTTGTACTCTCCCCTGTCGAATAACACTGT AAGACCAGACTTTCTCATGGTGCGTTTTCGCGGACCGTGTGGTATTTGGT TATTTACAAGTGCTTCTTCTTGTTGAACATGTGCTCATGCGTGCTCTTTC AATCAGGATTGTTCGAGGTGCATTTGCCCCCCTTGGGTTTGGGAATTTGG GGATGATTTATCCAGACACATAGGTTCTAAAAAAATAGCTCCGCATTTCT TGGAAGAGTCCTGCTGCGCTAGTGCCTGAAAAATATGAACATTTCCGCAC CGTCAATTTTTGTGCCTTTGTTTAGGCTGCTCGAATATAGATCTCCCCCC CCCCTCCCCTGTATAATATGAGCATGCTCCACCCCCCTTCGACTGTCCTT TTCAATCTTCAATTTTGTGATAATCGGTTTGAGTAATGCATAACAAAAAA AATTAGAACATTTTCAAAGATTTTCAATCTCGGCAGTCAAGTATTTTCAT TTGCACCCCATACTATCAATTGCCCTCTCCCCCGTTGGTTCAATGATGGA GGTTGGAGCAAAATACGATAAATTGTTGGGCATATTCTTCAGAGCGCACC GTAGGGATTTTTTTCTTCGGTAAATCGTGCGTACATTATGTAAGCCTCAT TCTCGGGTATACAATCTTGGCACAGTGGTACTCTACGGTGTTGGGTAGGG GAAAGTACATTAGTGTCTCCCGGGTGGCAGCAAATACCCATCTCCTACGA ATCTTTTGCCCGGTCTACAGCATAGATCTCTGTTGCCTCCCCCTTTTTGG TTTGTTTGACAATGCCTCTATTCATTGCGCCAAAGGAACTTCCCGACGAT GTCAAGAAACGCTTGCACATCGTGCACGTCAGCGAGTCTTCTATTCCTCC TGAAAGCGGGCTTAAGGTGGCCCCCACCGGCGTGGAGCATACCGTACGAC TCGAAACGCCCTCCAACGCGTATGCTGAGGCAATGGAGGTGCTCGACCTA ATTGGTTCCGTGGGAGTGCTGAGCAAGTTGTCGATCACTCAGGTACTGTA TGGTCACGAGCACTTGGTGGGGTAGGGGCAAATGATACGTTCCCTATGCT ACTTTCGTATATTAAGGAAAACACTAAATGTAGAGATAATATTGTCACAG GCACACAACACCTGTTTTTTACGAGCCTTGGATTGTTGCCTGAGCGTCAG ATGTTTCCTTGGGAAAGATCATATTCGAACGTGTCGTTCCAATTAGCTGG TATTAGAAGAATCCGACGACCTCACAAGTCAAATTTCCGATTGTTGTACA AAACGGGCGAACTGGTAGGAAATCGTTGTGCTATTTTTAGTATCGGACCT TGAACCCTGGCGCGCCACTTTCTATGTTCATACTTATTCATGAAAGGTTT TATATACTTGGACATGATTCATGTTTACGATGGCTCCAGCGGTAATGATA CCGAGTGAGCGATGCGTCTGGAATGAAATGTGTCACTCGATCAATCAAAT CGAACTGTGCGCGCGCAGTGCGAGCGGTATCGACACGTTGCAGCATACTT TTGAATTACAATACTTGTAGGCAGTTCGCAAAGCTTACACGTAGACAGTC AGTTTCACATTTTTTAATGAGGCACGCGCAGTCTGTTCGGATACCACTTT GACGCGCTAGAAGAGAGTACCAGGGAACAGAAGGAAAACATTATGTGAAT AGATCCTGATGATTTGGTTCTAGAATTCTGTGGGAAGTAATATACTCTGA CCGCGGGTCTGAGGGATTGGACTGATTTGTCGAGAGGAAAAACGAAATTT GTTTACTGTACGTACACACGCCTCGTAAACAGCTGGGCAGATGGCGAAAC GTGTTATGAAAAGCACTGGTTTGAGAAGTGATTGGCATCGTCACTATCAC GAAAAACACTTCGATCATTCACAGAAACATGTTCCGAACTATCACATGAA AATCTACGATCACTGTAACACTTGAATGGATACACAGGGTGCACAATTAG TCTGCGAAATCATCACCAGCACCAATATATTCGTCATCATCGTCATCGTC ATCGTTATCATTGTCACCATCATCGTTATCATCATCATCATCATTGTTAT TATCATCGCCATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG AACATTGAACATATGAATATACTTTTTGAAAAGTATTTCCAACCACCTGT TTACCTTGTTTCCGAATTAATCGATGAAGGTTCGGGTGTGGGGCGTAGGT TGTGGGACGGTCTCCTTCGTACAGCAACGCCCCTCTACATCCAATAACTC AGATTATGTCTAATTTTTCGTGATGATGAGCGTATTGCCGATACTTTGTC GTTGGTTGTATATCCTTCGCAAACTTTTAGAATTCACCGCCAACATTGCA TATGAATCGCACGCCGGTATGACTGTAGGTCATTTTACAGTGCAGTGTTT ATTGCCCCTGGGTTCGTTTTTGCCCTGCCTTTTCGGTGGTAAAATTTAGG CCCGATCACTTCTGGAGGTGGCGAAAATTCGGACGTTTACGGCGGGCACA ACCCTCCAGGACAACAGCAGTGATGTGACCAACTTCGCGATCATTAGCCA TGGAAAGGCCGTCAGCATGTGAGTGTACAGAAAAATGGGTCATACTCCAC ATTTCAAACCTATTATTCCAGCGCACTACCGATTTGCAAAACGCCTCGTG TACGTGAGCAGGAAAACCGAAAGTGAGGGCTAGCGTGCCGCTAGTCATGA CCTTGTTTTGTCAAGTGGTATACATACCTTCGTGAATGTCAACAACGGTC AGGTGTTCCCCACACAGCGGGGTCCCGCATGAAGAATGGAAGATAATATA ATGGAGGTGAAGAGTGTGGAGACTGTATGGTACAGACAAGGAGTGATTCG AATAGGCTGTCCTTTCTACAAACAGAAACGAACAGTGTAACTTGCTCTTT CGTGCTGAGGCCATCATTCCAATTCCTCTAGTGTTGGTACCAGCTCTAGC TCTCCCAACTACCTGTGCTCAATGATTAGGGTCGTAAAATATTTCTACTT GTATTCAACCGTTGATAGAGAAAGCACCTCAACGAGAATAAGTCGTACTT ACCTGCAATGCCGTGAATTGATTGAGCAGAGTCACGAAAGCGCCGGGTGC CCGTAGATCGTACTCCCTGAAGGAGACTACACTGAGGCGAGGAGACTGCT TCGGGGAAGAGGTAAACCGCTTGATAACGATTGTAAGACCCCTTGATGTC CTAGAAGTCTCCAAAGACACGAGCCTCAGGTTGACGAGAGACTGGCTATT CCTTTGGTGTAAATTTGGGCAAGGAGAGACGGGTAATGGGGTTGATCTAG CGGTCAATGAGTAACCCTTGGATATCGGCAACCCATAGGTTACGGATTTG GTATCTTGGTGGAGTGCATATGTGATATAAGATAACGATCCTTCAGAGGT GCCTTTCACATGATACCTGGTGTAATTTACTGGAGTTCACCTGTAGAGGC ATGTCAAGGGAAGGATTTGGAACTATTGTGGGGTCGTTCTACTTTGTTAG GGTGAAGTTAAATACCCAATATCTCGAGATATACAACAAATTTGTACAAT TTCGTCGAAATAACGTTTCATGCTCATATTCTTTTACCGCTATATATTAT AATTTATTTATACATTATGTGTATTATTGCACAAGTTGTATCGTAGCCTG AATATGTTTCCTTCCTTAAGACAAAGCAAATAATAATCATAACCTTGTGT ACTAACTTTGACTGTTACTTTTTTCTCTCGGCGTTGTCTTATTTCTTCGT CGGCCAAGAACTTGTAGCATTATTCGACTGAATGATTTCAAATGTGTGGC CACAATAACAACGAAGGTTGAACATGACTCAGTTATCGTCCGACGTGAAG AAACCAGAGCTTCGAGTTATAGCCGTTCGCCAAGGAGGTTGGCCTACCAT TGTTTCATCAACCGTTGGTAGTTTCAATTCAATAGATCTTGTCGGGCCAA CCTTTTGCTACCATCGCAGAATCTTCAATCAGCACCATTTCTCACGGGTT TTTTTTCGCATCAAATAGAAACAAAAGCCGTTGAAAATCTGGTGGAACAA TGAAAACTCACACTGACCGGTGTGGCCATACGGAGAACTGTTAATTTCAC TGTTGAGTTTAGAAGAGAGCAACGTCGTCACGAGGGGACACCCAATTTTA GTCAGGTACTGTCTAATGGTTATAGGTCCCGCAGCGGCCGAAAGATTGTT TCTCACCATAAGTTTCAGATGATTATTGAAACCCACAACGTCATAGCTCG AGAGCAGGATTTCCCCTTTGCCGAGAACTATTACGGAGGAAGATAATAAT CAGGAGCAAATTAGAAAATTGACATTTTGAGGTGTAACTCATGCAATACG ATATGCACCAATCGGTTGCTGCATGCCTGTGCAAGTGTTTTTAGAGTGTG TTTTTGTTTTCAGCTAGAAGCGAAAATCTGTACACCAACGGGGAAAAAAA ATTCAGTTTCCGAAAAACCAAAAAAAAATCTCCTGATTATTATGTTCCTC CGTAATACAGGAAGTTTTTTTTTGTCAGGGTTCTTACAGCGAATTATTGT TTTGGCTCTTCATTCCTCGTTTACCAACCGCCGTGTCCCAGCCTGCACAT TGTCGGAGAGCAAACGTATTAGTAGTATAAAGCTAGCGTCTATTTTTTAT GCAAGGGCGGTATAACACACCAACATTCTGTAGGCCGAAATTGGCTAAAG TGTATATGTATATTTTTTTAGTTGAGCATAGAAGAATATTAGTCAGCGTC TGGGTTATGCAGCGTTGTAAGCTAACTTCGCAGTGTTGCTTTCAGCCCTG AAGATAGTTTAAATCGGTCACGCGCCGCACGCGCTTTACCTGTCTCCACT GCCCCTGTTTGGTTGCGGGCTGTAGGGCTGTAGTATCTTGAAGGCCTGAT ACGGATACATCCTCTATGGGATCAGCAAAGTCGGTTGAGTTTGTGGAGAC GCGTAACCATGTTCGATTTTCTTTTTTTAGTTAGAGAGCTCTAACCCTAA ATGTTTTTTGGGGTTGATCCCAACAATTCAATGAAAATTGGCGAAATCCA TTGGAAGCGCGTGCGGCGAAAAAAACCCGTCGACAGACAAAACAAGTCAT ATTTTGCTCCTTTTCGTATTTTCCCTATGAAAAAACGTGAAAATCGAAAA AAAACGTGGGAAAGGGTCAAATTGGTCCAAGCTTGAGTGGCTATTAATCT TGATAAAACGAATCGGGGGTGCACTTCGGAACAGCGCATATGAATCTATC AGATTTCACCTTCTCAATCATGTCAACCGCAGCTTTTGAACAGTCTTAGA TCTGGAGATGCGATCTGCCAAACACAGGTGACTTTACTTATGGCACAAAG GAAGTGTATGTAATATATACATATAATATATGAAAACAAACGCTAGGGCA AAATGGTACATACTGAACTTTGAGATTTTTTTTTCAAATTTCGAAAAAGA GGAGAAAAAAAAAAGGCAAAAAAAGGCAACAACGGTTGGAACGGCCCTGA TGTGGTATTCCGACGAACAGTAAACAATTGACCGCCCCCTGGAACTGACA GGGTTATGAGCTGTCGTTAACTGACTGATGTTACCGTGTCGTCTATTTTG AAGCTGTTTTCCCACGTTTCGTGTTTGTTGTTTGCCATTTGTGTTTGCTG GACAATGACACGGCGTTTGCAGCTCCTGCTAGCAGGAAGTGTTCGCCGAA AAGGATATGTGCGAGTTAGAGCCGTCACGGACATGGAGGTAGGCACCAAC GTTTTTGTTCTTCTCTCCTTCCTAGCTTTGTTCAGTTATTTTCTTTTTTT TATGTGGATGCGTGGATGTGTGGATGTATGTACCACCCCTATCCCGTAAG TCTGGCTTATAACGGTACTTTTACATTATCTTTTGCACTTTGGGGTTTCG TGAAAAATGAAGTATGTCCTTCCAAAGCCTACACGTTCAGCTTGCATGTA GATATCTTAAAAACAAAAAATTGAATCCGAAACGGTTGAGAACCGGGTAT CTCAACACATTTGTGTTTTTGGAAATGGCAGACTTTGCTAAAACAGGCGA GTAGACCGAAATCGACTGAAAATGATGGTTTTCCATTGTTTCGTGAGCCA TTTCGTCACATGTATAGATTTCCCAAACGAACAACAGTGAAAACGAAGCT CTTCAATCACAACAAGCTGATGGATTTGTTTTTAGAATATTATAATCCGA TTTGCTTCCAAAAAATAGACTTCTGAAAGATTTTCCTTGATATTCCCATT GTGGGGAATTCTCAACTTTGAGCGATCGCGCTTCCTCCTCAAGGGTTCCA CAATTCCCCCAACTCTCACATCGCCCGCGAGTCAAGCGCATGACCCACAT GGCCGACCCAAACAGTCCGGTGTCACTCTCAGCAAGTCCGCCAACCCGGG GAAAATATGCCGAACTGAGCGAAGAAGGCCGGCACGCGTTTGCCATTCGC TACGCTTTGGCACTTCTTCCCGGAAACCAACAGTTCCAGAATGATGTTCC TCAACAGCTGGCAGACGAATGTGGCGTTCACATCACTTGCCAGGGGAGGT TATGGGCGCATGTGCGAGGGCAACTGGAGCCCGTTTCCGTTTCCCTGAAA TCAGCAGCTAGACCAGGCCGGCTGGCCGACTTTACGCCAAGAGAACTCGC GAAAATTCGACGAGTCAACGTTGAAAATCGCACCCTGACCCTTGACCATC TCTCTGCCAAGCTGGCCGAAGTGGGTCTCGTAACGGGCAACTCCAACTTC AGCGCTTGCTCAAAGCTATAGGAGTGACAAAGATAAAACGAGACGCTACT CCGAGTTTGTCGTTCGCTCAAGACCCGGGCGGACTTCATCTTTGACGAGG CCTCCAAGAACCGCAAGATCTTCCTGAATGGCCGCAACACGCTTCACATC GACGAAGCATGGTTCTACCCCATGCGCGAACGGGAGCAAGTTGGCATGTT TCCCCGGGAGGAGCGATTGGACGCCATCAAGGTGCAGCACAAAAGTCACT TCCCAAAGTCATGTTCTCTGTCCCCTTTCCCGCCCGGATCCTGACAACGG CTTCAACGGCACGATCGGGATATGGTGTGCTAGCGTCATCAAAGAGGCGC CTTGGCGAACCGCTCGTCACGGAAGGGGTATTGAGTACGAGGTCGAAGTC ACCATCCGCAGCGAGCGCTACCAAGAGCGGTACACGGAGGTTTTCCTCCC CACACTAAACGAAAAGATGCCATGATTGGAGGAGGAGGAAGTTGTCGTGC AGGAAGCTAAACCTGGCAGGGATGGAGGACGGATGGAACATCAAGCTCGT AACGCAGTCGGCACAGTCTCCCAATCTTAATATCAACGATTTCGAGTTTT TCGCATCCCTGGAATCTAGAGTGTGGACGCAGCGCCACCGTATGTTAGAC GTCCTTGTAGGGGAACTTAACAGTCTGTAGGACCATTATGACGCGGATAC TCTAGAGTTAGTTTGACAGAGCCTTTTCAAGCTGTACAACCAAGTGTTGA AAGCGCTAGGGGGACACGCCTTAGACATCGGGCATACGGGGAGCACGAAA ATGAAGCCGGAGGGGCTTTTGGACCAGTTGGCCCCGATTGACCGAGCCAA TTACGACACGGCTTTCAATTGGTGGATTGATGGGTAATGAACAATTAATT TGTTGTACTACGTAGTATGAAACGCCAAGGGATACAACGCAACAAACTGT TTCTTAATCGGAGGCCTCCTAGAGATTTTTTATCAAACAATAACCATGAT TTTCATCGGATTTCGGTATATTTGGTTGTTTTTTCAAAATGTTCCATTCC GAAACAAAACGTGCTGAACATTTTGAAGATATCTATATGCAAGCTGAACG TGTAGGGTTTCGGACGATATGCTTTATTTTCACCAAATGCAAATTCGCAA CAGATATTTACAAAATGCCGTTATGAGACAGACCTACGGGACAAATGTAG AGTGTATTTATGGAATGCTACGCTATGCTATACTATGGTATGGTATGATA CGGCATGGAATCCACATATATTGTCCAGACATTTAGGTGGCAGGTCAGCG GCTTAGACCTCCTCGTCACCGGTACGCAGGACACGAGTACGCCAGTCGCG TAGATCATTCACACTCTCGTAATAATCGTCACCACATTAGCGCATGACGC AATACCATTTATTCTAATGCGCTGGTGTATATGGTGATATGTGTGTGTTG TATGCAAATGTTGGCACTGCACTGTGTTTCCTGTATTTATGATCCAATAC ATTGCTGTTCAATGGGGAAAAGTCATCTTTTGCTTTGCTGATGTTGATTG TGTTTCTTTTTCTCAAGTTAGAACCCTAAAATTGTTTAGGTGTTGAACGA GTCAAATGCTGAGCATGATGAATGATGATAAGTTCGTTTGATGTCGTGTT CACCCTACCAATCCCACTGATAGTATATTCGGCGACATTGTTGAGGTATC AGTTATCCCTGCGTTTTTACTCGTTTGTCGCGTTTTGGATCTGCATCAAC TAGGTCCTGCTCTTTAGTGGAAAGGATCTTGAGCAGGTGGTGGGACTCGA GAAGCGAACATTGGAAGACAAGTACCGTGTGGATCGCCTCTTGGTACACA ATTCGGTTCTATCTGCGCTGAGCCGAAAGCAGATACTCTTGCTTGAGAGC ATAACCGAGGCGAGGCTTACCGTACCGTAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2179:10644..22023-

>mRNA_H-paniculata_contig2179.5762.1 ID=mRNA_H-paniculata_contig2179.5762.1|Name=mRNA_H-paniculata_contig2179.5762.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig2179:10644..22023- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGTTCTCGGCAGATCACATGAACGACCCAGCTCGTATAATGTCTAT
GTGCGAGGAGGGAGTTTTGTCAGAGGGACGGCGTGATGCGCTATTAAACT
TCCCGTGGCATCACGATGTCATATTCCACGAAGCCGGGATCCCGCCCATA
CACACTCCTATGCGGACGCTTGAGATGGTGTTCTCGGCAGATCACATGAA
CGACCCAGCTCGTATAATGTCTATGTGCGAGGAGGGAGTTTTGTCAGAGG
GACGGCGTGATGCGCTATTAAACTTCCCGTGGCATCACGATGTCATATTC
CACGAAGCCGGGATCCCGCCCATACACACTCCTATGCGGACGCTTGAGGA
ACTTCCCGACGATGTCAAGAAACGCTTGCACATCGTGCACGTCAGCGAGT
CTTCTATTCCTCCTGAAAGCGGGCTTAAGGTGGCCCCCACCGGCGTGGAG
CATACCGTACGACTCGAAACGCCCTCCAACGCGTATGCTGAGGCAATGGA
GGTGCTCGACCTAATTGGTTCCGTGGGAGTGCTGAGCAAGTTGTCGATCA
CTCAGGAACTTCCCGACGATGTCAAGAAACGCTTGCACATCGTGCACGTC
AGCGAGTCTTCTATTCCTCCTGAAAGCGGGCTTAAGGTGGCCCCCACCGG
CGTGGAGCATACCGTACGACTCGAAACGCCCTCCAACGCGTATGCTGAGG
CAATGGAGGTGCTCGACCTAATTGGTTCCGTGGGAGTGCTGAGCAAGTTG
TCGATCACTCAGGCCCGATCACTTCTGGAGGTGGCGAAAATTCGGACGTT
TACGGCGGGCACAACCCTCCAGGACAACAGCAGTGATGTGACCAACTTCG
CGATCATTAGCCATGGAAAGGCCGTCAGCATGCCCGATCACTTCTGGAGG
TGGCGAAAATTCGGACGTTTACGGCGGGCACAACCCTCCAGGACAACAGC
AGTGATGTGACCAACTTCGCGATCATTAGCCATGGAAAGGCCGTCAGCAT
AGTCACGAAAGCGCCGGGTGCCCGTAGATCGTACTCCCTGAAGGAGACTA
CACTGAGGCGAGGAGACTGCTTCGGGGAAGAGAGTCACGAAAGCGCCGGG
TGCCCGTAGATCGTACTCCCTGAAGGAGACTACACTGAGGCGAGGAGACT
GCTTCGGGGAAGAGCTCCTGCTAGCAGGAAGTGTTCGCCGAAAAGGATAT
GTGCGAGTTAGAGCCGTCACGGACATGGAGCTCCTGCTAGCAGGAAGTGT
TCGCCGAAAAGGATATGTGCGAGTTAGAGCCGTCACGGACATGGAGGTCC
TGCTCTTTAGTGGAAAGGATCTTGAGCAGGTGGTGGGACTCGAGAAGCGA
ACATTGGAAGACAAGTACCGTGTGGATCGCCTCTTGGTACACAATTCGGT
TCTATCTGCGCTGAGCCGAAAGCAGATACTCTTGCTTGAGAGCATAACCG
AGGCGAGGCTTACCGTACCGTAGGTCCTGCTCTTTAGTGGAAAGGATCTT
GAGCAGGTGGTGGGACTCGAGAAGCGAACATTGGAAGACAAGTACCGTGT
GGATCGCCTCTTGGTACACAATTCGGTTCTATCTGCGCTGAGCCGAAAGC
AGATACTCTTGCTTGAGAGCATAACCGAGGCGAGGCTTACCGTACCGTAG
back to top